EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000018024 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein Rab-1B-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 5310 bases
Position: chrPEQF01099473.1:1138153-1143462
Accession: 111647549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000023080	MMR_HSR1	PF01926.23	8.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000023820	-	645	XM_023397169	ENSSLDP00000023080	214 (aa)	XP_023252937	UPI000BBF253A

Gene Model

Click here to download ENSSLDG00000018024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018024's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000018024	zgc:171927	86	41.379	ENSSLDG00000005718	-	94	41.379
ENSSLDG00000018024	zgc:171927	78	46.821	ENSSLDG00000019214	zgc:101559	74	46.821
ENSSLDG00000018024	zgc:171927	80	41.714	ENSSLDG00000002646	si:dkey-34d22.5	79	41.714
ENSSLDG00000018024	zgc:171927	98	43.333	ENSSLDG00000010880	rab25a	96	43.333
ENSSLDG00000018024	zgc:171927	92	73.604	ENSSLDG00000011757	-	97	75.000
ENSSLDG00000018024	zgc:171927	72	38.608	ENSSLDG00000011597	si:dkey-13a21.4	77	38.608
ENSSLDG00000018024	zgc:171927	80	42.775	ENSSLDG00000020354	rab42a	79	42.775
ENSSLDG00000018024	zgc:171927	98	41.509	ENSSLDG00000010503	rab14	97	41.509
ENSSLDG00000018024	zgc:171927	85	31.156	ENSSLDG00000003489	rasl11a	76	31.156
ENSSLDG00000018024	zgc:171927	81	39.306	ENSSLDG00000012474	rab6bb	79	39.306
ENSSLDG00000018024	zgc:171927	79	32.941	ENSSLDG00000025169	rhebl1	90	32.941
ENSSLDG00000018024	zgc:171927	100	71.028	ENSSLDG00000012251	rab1ba	100	71.028
ENSSLDG00000018024	zgc:171927	68	30.065	ENSSLDG00000020097	-	80	30.065
ENSSLDG00000018024	zgc:171927	80	49.143	ENSSLDG00000021984	RAB15	83	49.143
ENSSLDG00000018024	zgc:171927	99	44.550	ENSSLDG00000012116	rab11al	96	44.550
ENSSLDG00000018024	zgc:171927	96	37.379	ENSSLDG00000003264	rab6ba	94	37.379
ENSSLDG00000018024	zgc:171927	80	36.047	ENSSLDG00000020918	RAB17	75	36.047
ENSSLDG00000018024	zgc:171927	88	54.124	ENSSLDG00000015823	-	97	54.124
ENSSLDG00000018024	zgc:171927	98	41.905	ENSSLDG00000012091	rab25b	96	41.905
ENSSLDG00000018024	zgc:171927	79	37.572	ENSSLDG00000009351	rab9b	84	37.572
ENSSLDG00000018024	zgc:171927	76	36.585	ENSSLDG00000012627	hrasb	86	36.585
ENSSLDG00000018024	zgc:171927	80	45.930	ENSSLDG00000022239	rab12	71	45.930
ENSSLDG00000018024	zgc:171927	76	41.916	ENSSLDG00000022004	rab33a	60	41.916
ENSSLDG00000018024	zgc:171927	76	61.728	ENSSLDG00000003631	si:dkey-16l2.16	77	61.728
ENSSLDG00000018024	zgc:171927	55	32.203	ENSSLDG00000011226	arl8a	61	32.203
ENSSLDG00000018024	zgc:171927	77	38.462	ENSSLDG00000024959	-	82	38.462
ENSSLDG00000018024	zgc:171927	99	44.550	ENSSLDG00000005275	-	96	44.550
ENSSLDG00000018024	zgc:171927	72	36.478	ENSSLDG00000004352	-	75	36.478
ENSSLDG00000018024	zgc:171927	79	49.704	ENSSLDG00000022555	rab2a	99	42.381
ENSSLDG00000018024	zgc:171927	58	32.283	ENSSLDG00000005628	arl4d	62	32.283
ENSSLDG00000018024	zgc:171927	84	35.000	ENSSLDG00000000287	rab23	97	33.500
ENSSLDG00000018024	zgc:171927	99	40.566	ENSSLDG00000009725	-	96	40.566
ENSSLDG00000018024	zgc:171927	81	48.588	ENSSLDG00000006014	rab18b	86	48.588
ENSSLDG00000018024	zgc:171927	99	44.076	ENSSLDG00000020676	rab11bb	96	44.076
ENSSLDG00000018024	zgc:171927	68	40.541	ENSSLDG00000014812	rab34b	72	40.541
ENSSLDG00000018024	zgc:171927	79	52.381	ENSSLDG00000005221	rab11ba	77	52.381
ENSSLDG00000018024	zgc:171927	78	34.524	ENSSLDG00000021833	si:ch73-116o1.2	80	34.524
ENSSLDG00000018024	zgc:171927	84	81.868	ENSSLDG00000018942	rab1ab	90	81.868
ENSSLDG00000018024	zgc:171927	75	40.373	ENSSLDG00000015289	-	77	40.373
ENSSLDG00000018024	zgc:171927	99	46.226	ENSSLDG00000022533	rab30	97	46.226
ENSSLDG00000018024	zgc:171927	75	51.235	ENSSLDG00000006977	rab18a	79	51.235
ENSSLDG00000018024	zgc:171927	77	38.462	ENSSLDG00000012391	RAB7A	82	38.462
ENSSLDG00000018024	zgc:171927	68	44.737	ENSSLDG00000008070	-	63	44.737
ENSSLDG00000018024	zgc:171927	79	43.860	ENSSLDG00000009068	-	80	43.860
ENSSLDG00000018024	zgc:171927	85	39.894	ENSSLDG00000008584	rab33ba	87	39.894
ENSSLDG00000018024	zgc:171927	87	32.487	ENSSLDG00000013333	si:cabz01085950.1	97	32.487
ENSSLDG00000018024	zgc:171927	96	33.803	ENSSLDG00000009573	rab34a	85	33.803
ENSSLDG00000018024	zgc:171927	85	51.381	ENSSLDG00000009438	rab11a	84	51.381
ENSSLDG00000018024	zgc:171927	71	33.553	ENSSLDG00000015122	rras2	81	34.146
ENSSLDG00000018024	zgc:171927	79	50.296	ENSSLDG00000023317	rab15	79	50.296
ENSSLDG00000018024	zgc:171927	56	30.833	ENSSLDG00000009588	arl8bb	62	30.833
ENSSLDG00000018024	zgc:171927	82	43.182	ENSSLDG00000017771	rab5c	80	43.182
ENSSLDG00000018024	zgc:171927	79	43.275	ENSSLDG00000006360	RAB39B	80	43.275
ENSSLDG00000018024	zgc:171927	82	44.886	ENSSLDG00000011069	rab5aa	81	44.886
ENSSLDG00000018024	zgc:171927	82	33.146	ENSSLDG00000018681	rheb	94	33.146
ENSSLDG00000018024	zgc:171927	55	30.833	ENSSLDG00000012798	-	64	30.833
ENSSLDG00000018024	zgc:171927	77	38.182	ENSSLDG00000022168	kras	91	37.572
ENSSLDG00000018024	zgc:171927	55	30.252	ENSSLDG00000015190	arl4aa	61	30.252
ENSSLDG00000018024	zgc:171927	96	35.849	ENSSLDG00000009464	rab36	77	35.849
ENSSLDG00000018024	zgc:171927	54	31.667	ENSSLDG00000008208	-	59	31.667
ENSSLDG00000018024	zgc:171927	75	39.752	ENSSLDG00000022282	rab41	76	39.752
ENSSLDG00000018024	zgc:171927	72	37.736	ENSSLDG00000000773	rab9a	79	37.736
ENSSLDG00000018024	zgc:171927	86	39.037	ENSSLDG00000020438	rab22a	94	39.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018024	zgc:171927	100	97.196	ENSAPOG00000004980	-	100	97.196	Acanthochromis_polyacanthus
ENSSLDG00000018024	zgc:171927	100	97.196	ENSACIG00000009006	zgc:171927	100	97.196	Amphilophus_citrinellus
ENSSLDG00000018024	zgc:171927	100	93.925	ENSAOCG00000024149	-	100	93.925	Amphiprion_ocellaris
ENSSLDG00000018024	zgc:171927	71	89.677	ENSAOCG00000013808	-	93	98.347	Amphiprion_ocellaris
ENSSLDG00000018024	zgc:171927	100	94.393	ENSAPEG00000022171	zgc:171927	99	94.393	Amphiprion_percula
ENSSLDG00000018024	zgc:171927	100	95.327	ENSATEG00000003430	zgc:171927	100	95.327	Anabas_testudineus
ENSSLDG00000018024	zgc:171927	100	96.262	ENSACLG00000013734	-	100	96.262	Astatotilapia_calliptera
ENSSLDG00000018024	zgc:171927	100	79.535	ENSAMXG00000039486	zgc:171927	100	79.535	Astyanax_mexicanus
ENSSLDG00000018024	zgc:171927	100	91.589	ENSCSEG00000014416	zgc:171927	100	91.589	Cynoglossus_semilaevis
ENSSLDG00000018024	zgc:171927	100	93.458	ENSCVAG00000009222	zgc:171927	100	93.458	Cyprinodon_variegatus
ENSSLDG00000018024	zgc:171927	100	79.070	ENSDARG00000033056	zgc:171927	100	79.070	Danio_rerio
ENSSLDG00000018024	zgc:171927	100	79.630	ENSELUG00000011680	zgc:171927	100	79.630	Esox_lucius
ENSSLDG00000018024	zgc:171927	100	93.925	ENSFHEG00000022176	zgc:171927	100	93.925	Fundulus_heteroclitus
ENSSLDG00000018024	zgc:171927	98	80.569	ENSGMOG00000004979	-	97	80.569	Gadus_morhua
ENSSLDG00000018024	zgc:171927	98	93.301	ENSGAFG00000015702	zgc:171927	84	93.301	Gambusia_affinis
ENSSLDG00000018024	zgc:171927	100	94.860	ENSGACG00000013401	zgc:171927	99	94.860	Gasterosteus_aculeatus
ENSSLDG00000018024	zgc:171927	100	96.262	ENSHBUG00000002397	-	100	96.262	Haplochromis_burtoni
ENSSLDG00000018024	zgc:171927	100	93.458	ENSKMAG00000009856	zgc:171927	100	93.458	Kryptolebias_marmoratus
ENSSLDG00000018024	zgc:171927	98	90.909	ENSLBEG00000027226	-	89	90.909	Labrus_bergylta
ENSSLDG00000018024	zgc:171927	100	91.589	ENSLBEG00000005791	-	100	91.589	Labrus_bergylta
ENSSLDG00000018024	zgc:171927	98	72.381	ENSLOCG00000014692	zgc:171927	96	72.381	Lepisosteus_oculatus
ENSSLDG00000018024	zgc:171927	100	93.925	ENSMAMG00000020135	zgc:171927	100	93.925	Mastacembelus_armatus
ENSSLDG00000018024	zgc:171927	100	96.262	ENSMZEG00005024685	-	100	96.262	Maylandia_zebra
ENSSLDG00000018024	zgc:171927	100	90.187	ENSMMOG00000009833	-	100	90.187	Mola_mola
ENSSLDG00000018024	zgc:171927	100	91.589	ENSMALG00000021129	zgc:171927	100	91.589	Monopterus_albus
ENSSLDG00000018024	zgc:171927	100	95.794	ENSNBRG00000006202	zgc:171927	100	95.794	Neolamprologus_brichardi
ENSSLDG00000018024	zgc:171927	100	90.654	ENSORLG00000000602	zgc:171927	100	90.654	Oryzias_latipes
ENSSLDG00000018024	zgc:171927	100	90.654	ENSORLG00020021071	zgc:171927	100	90.654	Oryzias_latipes_hni
ENSSLDG00000018024	zgc:171927	100	91.121	ENSORLG00015010098	zgc:171927	100	91.121	Oryzias_latipes_hsok
ENSSLDG00000018024	zgc:171927	100	92.056	ENSOMEG00000020594	zgc:171927	100	92.056	Oryzias_melastigma
ENSSLDG00000018024	zgc:171927	100	93.458	ENSPFOG00000013810	zgc:171927	99	93.458	Poecilia_formosa
ENSSLDG00000018024	zgc:171927	100	92.523	ENSPLAG00000005869	zgc:171927	100	92.523	Poecilia_latipinna
ENSSLDG00000018024	zgc:171927	100	93.458	ENSPMEG00000022350	zgc:171927	100	93.458	Poecilia_mexicana
ENSSLDG00000018024	zgc:171927	100	94.393	ENSPREG00000017517	zgc:171927	100	94.393	Poecilia_reticulata
ENSSLDG00000018024	zgc:171927	100	96.262	ENSPNYG00000007520	-	100	96.262	Pundamilia_nyererei
ENSSLDG00000018024	zgc:171927	100	79.535	ENSPNAG00000029574	zgc:171927	100	79.535	Pygocentrus_nattereri
ENSSLDG00000018024	zgc:171927	100	78.140	ENSSFOG00015005464	zgc:171927	99	78.140	Scleropages_formosus
ENSSLDG00000018024	zgc:171927	100	90.187	ENSSMAG00000004416	-	100	90.187	Scophthalmus_maximus
ENSSLDG00000018024	zgc:171927	100	100.000	ENSSDUG00000004445	zgc:171927	100	100.000	Seriola_dumerili
ENSSLDG00000018024	zgc:171927	100	96.262	ENSSPAG00000013533	zgc:171927	100	96.262	Stegastes_partitus
ENSSLDG00000018024	zgc:171927	100	94.860	ENSXCOG00000010695	zgc:171927	100	94.860	Xiphophorus_couchianus
ENSSLDG00000018024	zgc:171927	100	94.860	ENSXMAG00000004683	zgc:171927	100	94.860	Xiphophorus_maculatus