EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000018052 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 2-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 48126 bases
Position: chrPEQF01099042.1:2290081-2338206
Accession: 111662503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000023116	Fox-1_C	PF12414.8	5.2e-39	1	1
ENSSLDP00000023116	RRM_1	PF00076.22	2.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000023857	-	6410	XM_023416384	ENSSLDP00000023116	462 (aa)	XP_023272152	UPI000C6F9083

Gene Model

Click here to download ENSSLDG00000018052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000018052	-	56	57.678	ENSSLDG00000022256	rbfox1l	63	57.414
ENSSLDG00000018052	-	82	53.827	ENSSLDG00000000149	rbfox3b	70	58.644
ENSSLDG00000018052	-	71	56.156	ENSSLDG00000009353	rbfox1	86	54.902
ENSSLDG00000018052	-	85	74.185	ENSSLDG00000023983	rbfox2	83	75.255
ENSSLDG00000018052	-	62	62.500	ENSSLDG00000016098	-	69	61.786

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018052	-	92	57.974	ENSG00000100320	RBFOX2	99	59.036	Homo_sapiens
ENSSLDG00000018052	-	100	73.561	ENSAPOG00000004877	rbfox2	100	71.734	Acanthochromis_polyacanthus
ENSSLDG00000018052	-	100	96.112	ENSAPOG00000021561	-	100	96.112	Acanthochromis_polyacanthus
ENSSLDG00000018052	-	62	68.111	ENSAMEG00000007228	RBFOX2	94	67.000	Ailuropoda_melanoleuca
ENSSLDG00000018052	-	50	71.552	ENSACIG00000001690	rbfox2	90	66.403	Amphilophus_citrinellus
ENSSLDG00000018052	-	100	73.561	ENSAOCG00000013752	rbfox2	100	71.306	Amphiprion_ocellaris
ENSSLDG00000018052	-	100	94.816	ENSAOCG00000015358	-	100	94.600	Amphiprion_ocellaris
ENSSLDG00000018052	-	100	94.816	ENSAPEG00000013905	-	100	94.600	Amphiprion_percula
ENSSLDG00000018052	-	100	73.774	ENSAPEG00000022359	rbfox2	100	72.103	Amphiprion_percula
ENSSLDG00000018052	-	100	72.650	ENSATEG00000021951	rbfox2	100	72.103	Anabas_testudineus
ENSSLDG00000018052	-	100	94.156	ENSATEG00000009959	-	100	93.506	Anabas_testudineus
ENSSLDG00000018052	-	72	62.198	ENSAPLG00000007609	RBFOX2	91	58.583	Anas_platyrhynchos
ENSSLDG00000018052	-	92	57.816	ENSACAG00000016535	RBFOX2	96	54.923	Anolis_carolinensis
ENSSLDG00000018052	-	63	67.692	ENSANAG00000015245	RBFOX2	99	63.975	Aotus_nancymaae
ENSSLDG00000018052	-	100	72.979	ENSACLG00000009744	rbfox2	100	70.664	Astatotilapia_calliptera
ENSSLDG00000018052	-	100	93.521	ENSACLG00000017380	-	100	93.737	Astatotilapia_calliptera
ENSSLDG00000018052	-	100	73.093	ENSAMXG00000011451	rbfox2	97	78.481	Astyanax_mexicanus
ENSSLDG00000018052	-	92	57.602	ENSBTAG00000020125	RBFOX2	93	58.649	Bos_taurus
ENSSLDG00000018052	-	72	62.060	ENSCJAG00000038886	-	71	67.230	Callithrix_jacchus
ENSSLDG00000018052	-	91	58.405	ENSCJAG00000019456	-	93	56.216	Callithrix_jacchus
ENSSLDG00000018052	-	72	62.703	ENSCAFG00000001701	RBFOX2	73	67.568	Canis_familiaris
ENSSLDG00000018052	-	92	50.652	ENSCAFG00020004541	RBFOX2	94	45.714	Canis_lupus_dingo
ENSSLDG00000018052	-	92	57.667	ENSCHIG00000014027	RBFOX2	96	55.854	Capra_hircus
ENSSLDG00000018052	-	81	61.151	ENSTSYG00000014123	RBFOX2	100	57.488	Carlito_syrichta
ENSSLDG00000018052	-	70	61.128	ENSCAPG00000014308	RBFOX2	68	63.498	Cavia_aperea
ENSSLDG00000018052	-	72	62.162	ENSCPOG00000022180	RBFOX2	98	55.190	Cavia_porcellus
ENSSLDG00000018052	-	92	58.495	ENSCCAG00000036584	RBFOX2	96	55.388	Cebus_capucinus
ENSSLDG00000018052	-	92	56.087	ENSCATG00000038655	RBFOX2	97	56.341	Cercocebus_atys
ENSSLDG00000018052	-	78	58.794	ENSCLAG00000017106	RBFOX2	98	55.696	Chinchilla_lanigera
ENSSLDG00000018052	-	66	58.651	ENSCSAG00000008110	RBFOX2	87	57.864	Chlorocebus_sabaeus
ENSSLDG00000018052	-	66	56.305	ENSCHOG00000002887	RBFOX2	99	55.090	Choloepus_hoffmanni
ENSSLDG00000018052	-	72	62.432	ENSCPBG00000023144	RBFOX2	96	59.128	Chrysemys_picta_bellii
ENSSLDG00000018052	-	81	61.391	ENSCANG00000035832	RBFOX2	100	58.213	Colobus_angolensis_palliatus
ENSSLDG00000018052	-	92	57.883	ENSCGRG00001017727	Rbfox2	97	55.000	Cricetulus_griseus_chok1gshd
ENSSLDG00000018052	-	72	62.069	ENSCGRG00000014237	Rbfox2	91	58.760	Cricetulus_griseus_crigri
ENSSLDG00000018052	-	97	92.035	ENSCSEG00000007360	-	100	90.356	Cynoglossus_semilaevis
ENSSLDG00000018052	-	100	67.944	ENSCSEG00000007748	rbfox2	100	67.879	Cynoglossus_semilaevis
ENSSLDG00000018052	-	78	78.437	ENSCVAG00000016503	-	98	77.688	Cyprinodon_variegatus
ENSSLDG00000018052	-	51	77.823	ENSDARG00000052182	rbfox2	100	77.459	Danio_rerio
ENSSLDG00000018052	-	72	62.703	ENSDNOG00000004372	RBFOX2	70	67.568	Dasypus_novemcinctus
ENSSLDG00000018052	-	72	57.297	ENSDORG00000015003	Rbfox2	76	63.514	Dipodomys_ordii
ENSSLDG00000018052	-	72	75.524	ENSETEG00000005638	RBFOX2	83	66.429	Echinops_telfairi
ENSSLDG00000018052	-	92	58.134	ENSEASG00005018920	RBFOX2	96	55.000	Equus_asinus_asinus
ENSSLDG00000018052	-	92	58.134	ENSECAG00000018923	RBFOX2	96	55.000	Equus_caballus
ENSSLDG00000018052	-	78	55.087	ENSEEUG00000004549	RBFOX2	100	52.000	Erinaceus_europaeus
ENSSLDG00000018052	-	100	75.460	ENSELUG00000009404	-	100	74.280	Esox_lucius
ENSSLDG00000018052	-	51	75.104	ENSELUG00000000102	rbfox2	100	74.689	Esox_lucius
ENSSLDG00000018052	-	92	57.234	ENSFCAG00000010061	RBFOX2	96	54.526	Felis_catus
ENSSLDG00000018052	-	72	62.162	ENSFALG00000013111	RBFOX2	90	58.856	Ficedula_albicollis
ENSSLDG00000018052	-	100	74.200	ENSFHEG00000010546	rbfox2	100	72.650	Fundulus_heteroclitus
ENSSLDG00000018052	-	79	57.789	ENSGMOG00000005278	rbfox2	99	56.489	Gadus_morhua
ENSSLDG00000018052	-	54	57.491	ENSGALG00000012540	RBFOX2	72	56.690	Gallus_gallus
ENSSLDG00000018052	-	53	74.089	ENSGAFG00000017428	-	95	74.899	Gambusia_affinis
ENSSLDG00000018052	-	79	72.123	ENSGACG00000007174	-	99	72.237	Gasterosteus_aculeatus
ENSSLDG00000018052	-	79	62.683	ENSGACG00000015968	rbfox2	98	62.891	Gasterosteus_aculeatus
ENSSLDG00000018052	-	72	62.432	ENSGAGG00000025884	RBFOX2	91	59.128	Gopherus_agassizii
ENSSLDG00000018052	-	92	57.974	ENSGGOG00000037332	RBFOX2	96	55.315	Gorilla_gorilla
ENSSLDG00000018052	-	100	72.979	ENSHBUG00000004356	rbfox2	100	70.664	Haplochromis_burtoni
ENSSLDG00000018052	-	100	93.952	ENSHBUG00000000856	-	100	94.168	Haplochromis_burtoni
ENSSLDG00000018052	-	92	55.675	ENSHGLG00000012907	RBFOX2	99	58.537	Heterocephalus_glaber_female
ENSSLDG00000018052	-	72	62.032	ENSHGLG00100009986	RBFOX2	91	58.760	Heterocephalus_glaber_male
ENSSLDG00000018052	-	100	86.695	ENSHCOG00000005662	-	100	86.695	Hippocampus_comes
ENSSLDG00000018052	-	100	71.915	ENSHCOG00000016102	rbfox2	100	70.236	Hippocampus_comes
ENSSLDG00000018052	-	100	68.410	ENSIPUG00000016896	rbfox2	94	76.119	Ictalurus_punctatus
ENSSLDG00000018052	-	72	59.730	ENSSTOG00000014841	RBFOX2	91	56.676	Ictidomys_tridecemlineatus
ENSSLDG00000018052	-	72	60.490	ENSJJAG00000014885	Rbfox2	91	58.311	Jaculus_jaculus
ENSSLDG00000018052	-	100	71.915	ENSKMAG00000021880	-	100	71.092	Kryptolebias_marmoratus
ENSSLDG00000018052	-	100	88.936	ENSKMAG00000013354	-	100	88.723	Kryptolebias_marmoratus
ENSSLDG00000018052	-	66	58.621	ENSLACG00000003339	RBFOX2	79	58.025	Latimeria_chalumnae
ENSSLDG00000018052	-	72	60.695	ENSLAFG00000027140	RBFOX2	93	58.221	Loxodonta_africana
ENSSLDG00000018052	-	92	56.087	ENSMFAG00000031994	RBFOX2	96	58.537	Macaca_fascicularis
ENSSLDG00000018052	-	72	62.973	ENSMMUG00000014010	RBFOX2	96	59.673	Macaca_mulatta
ENSSLDG00000018052	-	92	55.819	ENSMNEG00000034388	RBFOX2	97	56.039	Macaca_nemestrina
ENSSLDG00000018052	-	81	61.391	ENSMLEG00000005854	RBFOX2	100	58.213	Mandrillus_leucophaeus
ENSSLDG00000018052	-	100	87.716	ENSMAMG00000008980	-	100	88.362	Mastacembelus_armatus
ENSSLDG00000018052	-	100	73.729	ENSMAMG00000004293	rbfox2	100	72.222	Mastacembelus_armatus
ENSSLDG00000018052	-	100	70.789	ENSMZEG00005023838	rbfox2	100	68.076	Maylandia_zebra
ENSSLDG00000018052	-	100	91.145	ENSMZEG00005004959	-	100	89.809	Maylandia_zebra
ENSSLDG00000018052	-	78	58.853	ENSMAUG00000018816	Rbfox2	91	56.676	Mesocricetus_auratus
ENSSLDG00000018052	-	92	58.065	ENSMICG00000035417	RBFOX2	96	54.957	Microcebus_murinus
ENSSLDG00000018052	-	60	47.115	ENSMICG00000046341	-	50	54.930	Microcebus_murinus
ENSSLDG00000018052	-	72	59.730	ENSMOCG00000009327	Rbfox2	91	56.676	Microtus_ochrogaster
ENSSLDG00000018052	-	51	71.667	ENSMMOG00000008287	rbfox2	100	69.198	Mola_mola
ENSSLDG00000018052	-	72	60.313	ENSMODG00000001122	RBFOX2	76	64.839	Monodelphis_domestica
ENSSLDG00000018052	-	51	81.967	ENSMALG00000000623	rbfox2	100	80.000	Monopterus_albus
ENSSLDG00000018052	-	92	57.391	MGP_CAROLIEiJ_G0019957	Rbfox2	96	54.565	Mus_caroli
ENSSLDG00000018052	-	92	57.112	ENSMUSG00000033565	Rbfox2	98	54.167	Mus_musculus
ENSSLDG00000018052	-	92	57.174	MGP_PahariEiJ_G0019967	Rbfox2	96	54.466	Mus_pahari
ENSSLDG00000018052	-	92	57.391	MGP_SPRETEiJ_G0020860	Rbfox2	96	54.565	Mus_spretus
ENSSLDG00000018052	-	81	60.671	ENSMPUG00000012555	RBFOX2	97	57.729	Mustela_putorius_furo
ENSSLDG00000018052	-	81	59.524	ENSMLUG00000002676	RBFOX2	98	57.554	Myotis_lucifugus
ENSSLDG00000018052	-	72	59.189	ENSNGAG00000020528	Rbfox2	91	56.131	Nannospalax_galili
ENSSLDG00000018052	-	100	73.134	ENSNBRG00000018155	rbfox2	100	71.674	Neolamprologus_brichardi
ENSSLDG00000018052	-	84	93.316	ENSNBRG00000001568	-	89	93.299	Neolamprologus_brichardi
ENSSLDG00000018052	-	85	59.310	ENSNLEG00000034979	RBFOX2	100	56.481	Nomascus_leucogenys
ENSSLDG00000018052	-	81	57.794	ENSMEUG00000001547	RBFOX2	100	54.348	Notamacropus_eugenii
ENSSLDG00000018052	-	83	78.947	ENSOPRG00000014878	RBFOX2	81	67.391	Ochotona_princeps
ENSSLDG00000018052	-	92	57.634	ENSODEG00000009937	RBFOX2	96	54.526	Octodon_degus
ENSSLDG00000018052	-	79	65.602	ENSONIG00000017998	rbfox2	97	64.109	Oreochromis_niloticus
ENSSLDG00000018052	-	78	82.443	ENSONIG00000008341	-	99	81.034	Oreochromis_niloticus
ENSSLDG00000018052	-	56	59.524	ENSOANG00000007489	RBFOX2	88	58.966	Ornithorhynchus_anatinus
ENSSLDG00000018052	-	81	53.699	ENSOCUG00000001349	RBFOX2	97	51.691	Oryctolagus_cuniculus
ENSSLDG00000018052	-	100	72.340	ENSORLG00000028082	rbfox2	100	70.386	Oryzias_latipes
ENSSLDG00000018052	-	100	90.343	ENSORLG00000014948	-	100	90.558	Oryzias_latipes
ENSSLDG00000018052	-	100	90.343	ENSORLG00020005676	-	100	90.558	Oryzias_latipes_hni
ENSSLDG00000018052	-	100	72.553	ENSORLG00020008976	rbfox2	100	70.601	Oryzias_latipes_hni
ENSSLDG00000018052	-	100	90.343	ENSORLG00015000797	-	100	90.558	Oryzias_latipes_hsok
ENSSLDG00000018052	-	100	72.553	ENSORLG00015007027	rbfox2	100	70.601	Oryzias_latipes_hsok
ENSSLDG00000018052	-	100	91.828	ENSOMEG00000007909	-	100	92.688	Oryzias_melastigma
ENSSLDG00000018052	-	100	72.611	ENSOMEG00000015966	rbfox2	100	70.172	Oryzias_melastigma
ENSSLDG00000018052	-	72	62.299	ENSOGAG00000033250	RBFOX2	74	67.000	Otolemur_garnettii
ENSSLDG00000018052	-	72	61.559	ENSOARG00000018669	RBFOX2	73	65.552	Ovis_aries
ENSSLDG00000018052	-	82	61.190	ENSPPAG00000035653	RBFOX2	98	58.034	Pan_paniscus
ENSSLDG00000018052	-	92	57.447	ENSPPRG00000015635	RBFOX2	96	58.856	Panthera_pardus
ENSSLDG00000018052	-	72	61.804	ENSPTIG00000019147	RBFOX2	92	58.491	Panthera_tigris_altaica
ENSSLDG00000018052	-	92	57.974	ENSPTRG00000014305	RBFOX2	96	55.315	Pan_troglodytes
ENSSLDG00000018052	-	92	58.190	ENSPANG00000007030	RBFOX2	97	56.280	Papio_anubis
ENSSLDG00000018052	-	100	67.591	ENSPKIG00000006854	-	100	66.094	Paramormyrops_kingsleyae
ENSSLDG00000018052	-	56	66.436	ENSPKIG00000010816	-	99	58.549	Paramormyrops_kingsleyae
ENSSLDG00000018052	-	72	62.432	ENSPSIG00000017828	RBFOX2	91	59.401	Pelodiscus_sinensis
ENSSLDG00000018052	-	51	78.926	ENSPMGG00000007138	rbfox2	100	77.637	Periophthalmus_magnuspinnatus
ENSSLDG00000018052	-	62	86.552	ENSPMGG00000016969	-	87	85.467	Periophthalmus_magnuspinnatus
ENSSLDG00000018052	-	72	59.730	ENSPEMG00000012542	Rbfox2	91	56.676	Peromyscus_maniculatus_bairdii
ENSSLDG00000018052	-	82	60.192	ENSPCIG00000021550	RBFOX2	94	57.421	Phascolarctos_cinereus
ENSSLDG00000018052	-	69	92.879	ENSPFOG00000001869	-	100	92.260	Poecilia_formosa
ENSSLDG00000018052	-	100	73.404	ENSPFOG00000014209	rbfox2	100	71.949	Poecilia_formosa
ENSSLDG00000018052	-	51	97.071	ENSPLAG00000002710	-	100	97.071	Poecilia_latipinna
ENSSLDG00000018052	-	51	79.253	ENSPLAG00000017308	rbfox2	100	76.667	Poecilia_latipinna
ENSSLDG00000018052	-	51	96.667	ENSPMEG00000013663	-	100	96.667	Poecilia_mexicana
ENSSLDG00000018052	-	51	80.738	ENSPMEG00000007320	rbfox2	100	78.750	Poecilia_mexicana
ENSSLDG00000018052	-	51	78.512	ENSPREG00000012955	rbfox2	100	77.215	Poecilia_reticulata
ENSSLDG00000018052	-	92	57.974	ENSPPYG00000011766	RBFOX2	96	55.315	Pongo_abelii
ENSSLDG00000018052	-	72	58.649	ENSPCOG00000016273	RBFOX2	84	55.041	Propithecus_coquereli
ENSSLDG00000018052	-	51	68.015	ENSPVAG00000015844	RBFOX2	66	63.569	Pteropus_vampyrus
ENSSLDG00000018052	-	100	73.191	ENSPNYG00000016161	rbfox2	100	71.734	Pundamilia_nyererei
ENSSLDG00000018052	-	100	93.750	ENSPNYG00000020595	-	100	93.750	Pundamilia_nyererei
ENSSLDG00000018052	-	99	60.169	ENSPNAG00000014196	-	100	57.906	Pygocentrus_nattereri
ENSSLDG00000018052	-	100	65.678	ENSPNAG00000000168	rbfox2	100	64.026	Pygocentrus_nattereri
ENSSLDG00000018052	-	81	58.111	ENSRNOG00000004688	Rbfox2	97	55.366	Rattus_norvegicus
ENSSLDG00000018052	-	72	62.331	ENSRBIG00000033696	RBFOX2	91	57.221	Rhinopithecus_bieti
ENSSLDG00000018052	-	92	57.974	ENSRROG00000035715	RBFOX2	96	56.873	Rhinopithecus_roxellana
ENSSLDG00000018052	-	81	61.165	ENSSBOG00000028291	RBFOX2	99	57.805	Saimiri_boliviensis_boliviensis
ENSSLDG00000018052	-	81	60.386	ENSSHAG00000006835	RBFOX2	97	57.178	Sarcophilus_harrisii
ENSSLDG00000018052	-	100	66.456	ENSSFOG00015010482	-	99	71.733	Scleropages_formosus
ENSSLDG00000018052	-	52	80.417	ENSSFOG00015013291	-	76	79.747	Scleropages_formosus
ENSSLDG00000018052	-	100	73.291	ENSSMAG00000013662	rbfox2	100	71.828	Scophthalmus_maximus
ENSSLDG00000018052	-	100	87.768	ENSSMAG00000004317	-	100	86.498	Scophthalmus_maximus
ENSSLDG00000018052	-	100	74.200	ENSSDUG00000004292	rbfox2	100	72.103	Seriola_dumerili
ENSSLDG00000018052	-	100	99.351	ENSSDUG00000009511	-	100	99.351	Seriola_dumerili
ENSSLDG00000018052	-	53	58.719	ENSSPUG00000011797	RBFOX2	74	57.500	Sphenodon_punctatus
ENSSLDG00000018052	-	100	96.328	ENSSPAG00000016272	-	100	96.328	Stegastes_partitus
ENSSLDG00000018052	-	100	73.774	ENSSPAG00000013681	rbfox2	100	72.103	Stegastes_partitus
ENSSLDG00000018052	-	81	60.775	ENSSSCG00000000152	RBFOX2	96	57.805	Sus_scrofa
ENSSLDG00000018052	-	72	62.162	ENSTGUG00000010808	RBFOX2	75	67.568	Taeniopygia_guttata
ENSSLDG00000018052	-	79	67.263	ENSTRUG00000007739	-	97	66.667	Takifugu_rubripes
ENSSLDG00000018052	-	55	80.508	ENSTBEG00000003297	-	58	90.000	Tupaia_belangeri
ENSSLDG00000018052	-	81	60.911	ENSTTRG00000006922	RBFOX2	100	57.729	Tursiops_truncatus
ENSSLDG00000018052	-	70	60.606	ENSUAMG00000010612	RBFOX2	88	57.222	Ursus_americanus
ENSSLDG00000018052	-	56	59.524	ENSUMAG00000016785	RBFOX2	76	56.918	Ursus_maritimus
ENSSLDG00000018052	-	81	55.875	ENSVPAG00000002824	RBFOX2	100	53.623	Vicugna_pacos
ENSSLDG00000018052	-	83	60.187	ENSVVUG00000023561	RBFOX2	100	57.075	Vulpes_vulpes
ENSSLDG00000018052	-	57	69.103	ENSXETG00000000231	rbfox2	75	65.320	Xenopus_tropicalis
ENSSLDG00000018052	-	58	97.674	ENSXCOG00000015905	-	84	97.674	Xiphophorus_couchianus
ENSSLDG00000018052	-	100	87.554	ENSXMAG00000026769	-	100	87.983	Xiphophorus_maculatus
ENSSLDG00000018052	-	78	73.713	ENSXMAG00000029498	rbfox2	90	72.131	Xiphophorus_maculatus