EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000018054 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2385 bases
Position: chrPEQF01095834.1:266-2650
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000023118	MMR_HSR1	PF01926.23	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000023858	-	732	-	ENSSLDP00000023118	244 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000018054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000018054	-	89	42.534	ENSSLDG00000017661	-	95	42.534

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018054	-	92	65.487	ENSAPOG00000006213	-	77	65.487	Acanthochromis_polyacanthus
ENSSLDG00000018054	-	81	64.141	ENSACIG00000014950	-	84	64.141	Amphilophus_citrinellus
ENSSLDG00000018054	-	93	68.261	ENSACIG00000023712	-	58	68.261	Amphilophus_citrinellus
ENSSLDG00000018054	-	78	41.451	ENSATEG00000008595	-	68	41.451	Anabas_testudineus
ENSSLDG00000018054	-	93	67.826	ENSACLG00000015361	-	57	67.826	Astatotilapia_calliptera
ENSSLDG00000018054	-	82	45.771	ENSACLG00000023033	-	51	45.771	Astatotilapia_calliptera
ENSSLDG00000018054	-	91	54.667	ENSAMXG00000030535	-	61	52.232	Astyanax_mexicanus
ENSSLDG00000018054	-	82	71.500	ENSCVAG00000014791	-	54	71.500	Cyprinodon_variegatus
ENSSLDG00000018054	-	89	68.778	ENSCVAG00000022676	-	65	68.778	Cyprinodon_variegatus
ENSSLDG00000018054	-	91	72.197	ENSCVAG00000022669	-	79	72.197	Cyprinodon_variegatus
ENSSLDG00000018054	-	99	63.014	ENSCVAG00000007794	-	52	63.014	Cyprinodon_variegatus
ENSSLDG00000018054	-	91	54.386	ENSDARG00000039888	CR855393.1	63	54.386	Danio_rerio
ENSSLDG00000018054	-	94	52.766	ENSDARG00000076398	si:dkey-201l21.4	58	52.766	Danio_rerio
ENSSLDG00000018054	-	95	48.760	ENSDARG00000100858	zgc:171695	57	48.760	Danio_rerio
ENSSLDG00000018054	-	92	54.545	ENSELUG00000022148	-	53	54.545	Esox_lucius
ENSSLDG00000018054	-	83	51.471	ENSELUG00000008413	-	51	51.675	Esox_lucius
ENSSLDG00000018054	-	92	58.515	ENSFHEG00000002160	-	72	58.515	Fundulus_heteroclitus
ENSSLDG00000018054	-	52	45.385	ENSGMOG00000019744	-	74	45.385	Gadus_morhua
ENSSLDG00000018054	-	76	42.021	ENSGMOG00000008232	-	56	41.885	Gadus_morhua
ENSSLDG00000018054	-	65	43.478	ENSGMOG00000019786	-	79	43.478	Gadus_morhua
ENSSLDG00000018054	-	56	41.304	ENSGMOG00000020208	-	76	41.304	Gadus_morhua
ENSSLDG00000018054	-	64	45.283	ENSGMOG00000020059	-	78	45.283	Gadus_morhua
ENSSLDG00000018054	-	95	54.936	ENSGAFG00000005050	-	90	54.936	Gambusia_affinis
ENSSLDG00000018054	-	78	42.487	ENSGAFG00000018470	-	74	42.487	Gambusia_affinis
ENSSLDG00000018054	-	91	66.368	ENSGACG00000005035	-	56	66.368	Gasterosteus_aculeatus
ENSSLDG00000018054	-	91	65.471	ENSGACG00000015437	-	56	65.471	Gasterosteus_aculeatus
ENSSLDG00000018054	-	65	46.875	ENSGACG00000015787	-	73	46.875	Gasterosteus_aculeatus
ENSSLDG00000018054	-	82	68.159	ENSHBUG00000023729	-	53	68.159	Haplochromis_burtoni
ENSSLDG00000018054	-	95	63.333	ENSHBUG00000007413	-	96	63.333	Haplochromis_burtoni
ENSSLDG00000018054	-	93	45.652	ENSIPUG00000013512	-	56	45.652	Ictalurus_punctatus
ENSSLDG00000018054	-	84	46.829	ENSIPUG00000000082	-	87	46.829	Ictalurus_punctatus
ENSSLDG00000018054	-	93	49.787	ENSIPUG00000009201	-	91	49.787	Ictalurus_punctatus
ENSSLDG00000018054	-	91	57.589	ENSLBEG00000019795	-	93	57.589	Labrus_bergylta
ENSSLDG00000018054	-	80	45.408	ENSLBEG00000028432	-	74	45.408	Labrus_bergylta
ENSSLDG00000018054	-	91	44.248	ENSLBEG00000012781	-	85	44.248	Labrus_bergylta
ENSSLDG00000018054	-	89	40.724	ENSLOCG00000017620	-	64	40.724	Lepisosteus_oculatus
ENSSLDG00000018054	-	76	45.989	ENSMAMG00000015204	-	74	45.989	Mastacembelus_armatus
ENSSLDG00000018054	-	97	68.534	ENSMZEG00005009606	-	51	68.534	Maylandia_zebra
ENSSLDG00000018054	-	82	68.159	ENSMZEG00005023309	-	53	68.159	Maylandia_zebra
ENSSLDG00000018054	-	93	66.960	ENSMZEG00005009576	-	50	66.960	Maylandia_zebra
ENSSLDG00000018054	-	84	71.359	ENSMZEG00005023315	-	52	71.359	Maylandia_zebra
ENSSLDG00000018054	-	90	68.778	ENSMZEG00005004397	-	76	68.778	Maylandia_zebra
ENSSLDG00000018054	-	91	65.502	ENSMMOG00000015162	-	88	65.502	Mola_mola
ENSSLDG00000018054	-	93	65.066	ENSMMOG00000011295	-	82	65.066	Mola_mola
ENSSLDG00000018054	-	93	65.502	ENSNBRG00000006565	-	72	65.502	Neolamprologus_brichardi
ENSSLDG00000018054	-	93	58.850	ENSONIG00000013617	-	54	58.850	Oreochromis_niloticus
ENSSLDG00000018054	-	91	61.712	ENSONIG00000013895	-	87	61.712	Oreochromis_niloticus
ENSSLDG00000018054	-	97	66.387	ENSONIG00000017927	-	71	66.387	Oreochromis_niloticus
ENSSLDG00000018054	-	89	37.557	ENSPMGG00000016292	-	53	37.557	Periophthalmus_magnuspinnatus
ENSSLDG00000018054	-	89	57.778	ENSPMGG00000020583	-	53	57.778	Periophthalmus_magnuspinnatus
ENSSLDG00000018054	-	78	44.388	ENSPMGG00000008676	-	54	44.388	Periophthalmus_magnuspinnatus
ENSSLDG00000018054	-	90	56.769	ENSPMGG00000016798	-	56	56.769	Periophthalmus_magnuspinnatus
ENSSLDG00000018054	-	95	55.602	ENSPMGG00000002690	-	64	55.602	Periophthalmus_magnuspinnatus
ENSSLDG00000018054	-	95	67.660	ENSPLAG00000019926	-	84	67.660	Poecilia_latipinna
ENSSLDG00000018054	-	93	53.275	ENSPMEG00000002994	-	50	53.275	Poecilia_mexicana
ENSSLDG00000018054	-	93	67.421	ENSPREG00000007255	-	55	67.421	Poecilia_reticulata
ENSSLDG00000018054	-	82	46.535	ENSPNYG00000016575	-	68	46.535	Pundamilia_nyererei
ENSSLDG00000018054	-	83	38.725	ENSPNAG00000011130	-	68	38.725	Pygocentrus_nattereri
ENSSLDG00000018054	-	84	84.390	ENSSDUG00000021349	-	88	84.390	Seriola_dumerili
ENSSLDG00000018054	-	90	41.441	ENSSDUG00000005919	-	76	41.441	Seriola_dumerili
ENSSLDG00000018054	-	95	39.662	ENSSDUG00000000316	-	98	39.662	Seriola_dumerili
ENSSLDG00000018054	-	94	39.744	ENSSDUG00000000370	-	91	39.744	Seriola_dumerili
ENSSLDG00000018054	-	92	63.436	ENSSPAG00000015996	-	85	63.436	Stegastes_partitus
ENSSLDG00000018054	-	90	42.411	ENSSPAG00000003300	-	87	42.411	Stegastes_partitus
ENSSLDG00000018054	-	93	59.471	ENSTRUG00000021059	-	84	59.471	Takifugu_rubripes
ENSSLDG00000018054	-	91	66.071	ENSTRUG00000001460	-	69	66.071	Takifugu_rubripes
ENSSLDG00000018054	-	91	58.744	ENSTRUG00000017314	-	94	58.744	Takifugu_rubripes
ENSSLDG00000018054	-	94	58.298	ENSTNIG00000003332	-	60	58.298	Tetraodon_nigroviridis
ENSSLDG00000018054	-	94	62.553	ENSTNIG00000006523	-	59	62.553	Tetraodon_nigroviridis
ENSSLDG00000018054	-	93	60.352	ENSTNIG00000005878	-	60	60.352	Tetraodon_nigroviridis
ENSSLDG00000018054	-	89	68.037	ENSXCOG00000001022	-	55	67.713	Xiphophorus_couchianus