EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000018273 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2408 bases
Position: chrPEQF01096075.1:154-2561
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000023424	zf-C2H2	PF00096.26	7.6e-38	1	8
ENSSLDP00000023424	zf-C2H2	PF00096.26	7.6e-38	2	8
ENSSLDP00000023424	zf-C2H2	PF00096.26	7.6e-38	3	8
ENSSLDP00000023424	zf-C2H2	PF00096.26	7.6e-38	4	8
ENSSLDP00000023424	zf-C2H2	PF00096.26	7.6e-38	5	8
ENSSLDP00000023424	zf-C2H2	PF00096.26	7.6e-38	6	8
ENSSLDP00000023424	zf-C2H2	PF00096.26	7.6e-38	7	8
ENSSLDP00000023424	zf-C2H2	PF00096.26	7.6e-38	8	8
ENSSLDP00000023424	zf-met	PF12874.7	6.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000024178	-	891	-	ENSSLDP00000023424	296 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000018273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018273's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000018273	-	86	61.250	ENSSLDG00000005850	-	92	61.250
ENSSLDG00000018273	-	90	38.846	ENSSLDG00000015116	-	83	37.000
ENSSLDG00000018273	-	80	36.508	ENSSLDG00000012852	snai2	64	36.508
ENSSLDG00000018273	-	90	49.438	ENSSLDG00000020727	-	99	45.614
ENSSLDG00000018273	-	96	60.889	ENSSLDG00000007756	-	100	55.665
ENSSLDG00000018273	-	92	59.836	ENSSLDG00000018493	-	97	59.836
ENSSLDG00000018273	-	86	64.679	ENSSLDG00000010390	-	92	64.679
ENSSLDG00000018273	-	89	52.356	ENSSLDG00000012036	-	93	51.974
ENSSLDG00000018273	-	99	77.076	ENSSLDG00000018598	-	97	82.156
ENSSLDG00000018273	-	79	38.153	ENSSLDG00000011849	-	59	39.394
ENSSLDG00000018273	-	83	39.904	ENSSLDG00000016301	-	91	39.904
ENSSLDG00000018273	-	80	47.660	ENSSLDG00000020455	-	93	47.660
ENSSLDG00000018273	-	85	43.878	ENSSLDG00000013353	prdm5	78	43.878
ENSSLDG00000018273	-	76	51.235	ENSSLDG00000010190	-	78	51.235
ENSSLDG00000018273	-	87	52.632	ENSSLDG00000008645	-	99	53.153
ENSSLDG00000018273	-	89	50.000	ENSSLDG00000020655	-	76	50.000
ENSSLDG00000018273	-	85	46.667	ENSSLDG00000012821	znf236	70	43.750
ENSSLDG00000018273	-	91	36.000	ENSSLDG00000018521	znf646	76	41.250
ENSSLDG00000018273	-	89	43.678	ENSSLDG00000006724	-	99	43.678
ENSSLDG00000018273	-	88	44.872	ENSSLDG00000006288	-	95	44.872
ENSSLDG00000018273	-	84	31.383	ENSSLDG00000000464	-	54	44.595
ENSSLDG00000018273	-	91	47.826	ENSSLDG00000004005	-	84	47.826
ENSSLDG00000018273	-	89	45.495	ENSSLDG00000007524	-	94	45.495
ENSSLDG00000018273	-	96	41.872	ENSSLDG00000001850	-	81	41.872
ENSSLDG00000018273	-	78	52.899	ENSSLDG00000004098	-	96	52.899
ENSSLDG00000018273	-	81	44.156	ENSSLDG00000016454	-	51	44.156
ENSSLDG00000018273	-	95	41.667	ENSSLDG00000002776	-	68	41.667
ENSSLDG00000018273	-	81	50.427	ENSSLDG00000000203	-	91	47.826
ENSSLDG00000018273	-	77	48.750	ENSSLDG00000002515	-	64	48.750
ENSSLDG00000018273	-	86	38.500	ENSSLDG00000014166	znf319b	82	42.169
ENSSLDG00000018273	-	78	57.895	ENSSLDG00000005868	-	78	57.895
ENSSLDG00000018273	-	92	38.095	ENSSLDG00000025265	znf526	60	38.095
ENSSLDG00000018273	-	75	50.617	ENSSLDG00000000202	-	76	50.617
ENSSLDG00000018273	-	80	42.857	ENSSLDG00000017166	scrt1b	51	42.857
ENSSLDG00000018273	-	90	56.419	ENSSLDG00000017937	-	99	60.150
ENSSLDG00000018273	-	89	46.154	ENSSLDG00000020990	-	80	46.154
ENSSLDG00000018273	-	92	35.510	ENSSLDG00000005670	-	92	35.510
ENSSLDG00000018273	-	76	36.765	ENSSLDG00000014436	-	71	36.765
ENSSLDG00000018273	-	77	37.681	ENSSLDG00000005999	-	74	37.681
ENSSLDG00000018273	-	79	40.132	ENSSLDG00000013823	gfi1b	52	39.412
ENSSLDG00000018273	-	89	42.857	ENSSLDG00000002756	-	88	42.857
ENSSLDG00000018273	-	85	43.182	ENSSLDG00000000457	-	82	43.182
ENSSLDG00000018273	-	91	54.955	ENSSLDG00000020675	-	100	54.978
ENSSLDG00000018273	-	78	53.846	ENSSLDG00000009061	-	91	53.623
ENSSLDG00000018273	-	77	38.860	ENSSLDG00000001780	znf652	51	38.860
ENSSLDG00000018273	-	76	46.667	ENSSLDG00000001787	zbtb24	94	46.667
ENSSLDG00000018273	-	79	48.969	ENSSLDG00000009821	-	79	47.321
ENSSLDG00000018273	-	89	39.500	ENSSLDG00000024295	ZNF319	87	39.500
ENSSLDG00000018273	-	83	45.833	ENSSLDG00000005839	-	60	45.833
ENSSLDG00000018273	-	89	43.966	ENSSLDG00000000859	-	91	43.966
ENSSLDG00000018273	-	85	44.681	ENSSLDG00000001860	-	82	44.554
ENSSLDG00000018273	-	79	49.573	ENSSLDG00000018033	-	76	49.573
ENSSLDG00000018273	-	78	45.455	ENSSLDG00000014177	zbtb47b	67	45.455
ENSSLDG00000018273	-	85	43.357	ENSSLDG00000023060	-	80	33.663
ENSSLDG00000018273	-	94	50.000	ENSSLDG00000012320	-	98	54.945
ENSSLDG00000018273	-	76	41.935	ENSSLDG00000017614	-	92	41.935
ENSSLDG00000018273	-	81	45.098	ENSSLDG00000000352	-	72	45.098
ENSSLDG00000018273	-	77	46.903	ENSSLDG00000000432	-	96	46.903
ENSSLDG00000018273	-	83	76.190	ENSSLDG00000016317	-	84	76.190
ENSSLDG00000018273	-	87	42.361	ENSSLDG00000006994	-	97	42.361
ENSSLDG00000018273	-	86	44.944	ENSSLDG00000007568	-	96	44.944
ENSSLDG00000018273	-	84	41.844	ENSSLDG00000017718	zbtb48	59	38.565
ENSSLDG00000018273	-	87	47.317	ENSSLDG00000000376	-	75	47.317
ENSSLDG00000018273	-	96	54.978	ENSSLDG00000012133	-	99	54.978
ENSSLDG00000018273	-	90	51.754	ENSSLDG00000013760	-	99	52.400
ENSSLDG00000018273	-	79	43.534	ENSSLDG00000021278	-	59	43.534
ENSSLDG00000018273	-	80	32.500	ENSSLDG00000019660	znf341	51	33.540
ENSSLDG00000018273	-	93	43.750	ENSSLDG00000021127	-	70	43.750
ENSSLDG00000018273	-	92	44.279	ENSSLDG00000023661	-	95	44.279
ENSSLDG00000018273	-	76	45.205	ENSSLDG00000025359	-	58	45.205
ENSSLDG00000018273	-	75	59.322	ENSSLDG00000015049	-	94	59.322
ENSSLDG00000018273	-	79	49.573	ENSSLDG00000004756	-	74	49.333
ENSSLDG00000018273	-	92	39.316	ENSSLDG00000004485	-	73	39.316
ENSSLDG00000018273	-	87	46.766	ENSSLDG00000020432	-	85	46.766
ENSSLDG00000018273	-	78	57.895	ENSSLDG00000006217	-	76	57.895
ENSSLDG00000018273	-	85	43.503	ENSSLDG00000013170	zbtb17	87	48.718
ENSSLDG00000018273	-	79	52.427	ENSSLDG00000009582	-	98	52.427

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018273	-	90	40.359	ENSAPOG00000019960	-	99	40.359	Acanthochromis_polyacanthus
ENSSLDG00000018273	-	96	55.844	ENSAPOG00000006303	-	94	55.844	Acanthochromis_polyacanthus
ENSSLDG00000018273	-	80	60.000	ENSAPOG00000008802	-	99	60.000	Acanthochromis_polyacanthus
ENSSLDG00000018273	-	84	55.797	ENSACIG00000004745	-	96	50.000	Amphilophus_citrinellus
ENSSLDG00000018273	-	98	52.899	ENSACIG00000022658	-	90	54.148	Amphilophus_citrinellus
ENSSLDG00000018273	-	85	53.913	ENSAOCG00000013710	-	84	53.913	Amphiprion_ocellaris
ENSSLDG00000018273	-	95	51.445	ENSAOCG00000014165	-	93	51.445	Amphiprion_ocellaris
ENSSLDG00000018273	-	96	56.306	ENSAOCG00000013130	-	91	56.306	Amphiprion_ocellaris
ENSSLDG00000018273	-	96	56.306	ENSAPEG00000009383	-	83	53.030	Amphiprion_percula
ENSSLDG00000018273	-	89	53.365	ENSAPEG00000006650	-	99	51.464	Amphiprion_percula
ENSSLDG00000018273	-	79	49.099	ENSATEG00000015695	-	98	49.099	Anabas_testudineus
ENSSLDG00000018273	-	79	49.099	ENSATEG00000017618	-	98	49.099	Anabas_testudineus
ENSSLDG00000018273	-	96	54.661	ENSACLG00000026703	-	89	54.661	Astatotilapia_calliptera
ENSSLDG00000018273	-	85	46.637	ENSACLG00000019291	-	88	46.637	Astatotilapia_calliptera
ENSSLDG00000018273	-	96	59.259	ENSACLG00000023513	-	93	51.331	Astatotilapia_calliptera
ENSSLDG00000018273	-	96	49.735	ENSACLG00000018746	-	99	49.515	Astatotilapia_calliptera
ENSSLDG00000018273	-	97	57.143	ENSACLG00000021343	-	96	57.143	Astatotilapia_calliptera
ENSSLDG00000018273	-	83	45.631	ENSAMXG00000043302	-	76	44.811	Astyanax_mexicanus
ENSSLDG00000018273	-	75	53.953	ENSAMXG00000041975	-	81	54.545	Astyanax_mexicanus
ENSSLDG00000018273	-	82	47.692	ENSAMXG00000042275	-	93	47.598	Astyanax_mexicanus
ENSSLDG00000018273	-	80	48.259	ENSAMXG00000039408	-	89	48.259	Astyanax_mexicanus
ENSSLDG00000018273	-	80	55.882	ENSAMXG00000035920	-	91	55.882	Astyanax_mexicanus
ENSSLDG00000018273	-	80	46.199	ENSBTAG00000016191	ZNF32	71	46.199	Bos_taurus
ENSSLDG00000018273	-	80	46.199	ENSCHIG00000021099	ZNF32	71	46.199	Capra_hircus
ENSSLDG00000018273	-	95	45.813	ENSCSAVG00000001808	-	100	45.813	Ciona_savignyi
ENSSLDG00000018273	-	78	61.404	ENSCVAG00000021225	-	95	61.404	Cyprinodon_variegatus
ENSSLDG00000018273	-	90	46.784	ENSDNOG00000035046	ZNF32	81	46.784	Dasypus_novemcinctus
ENSSLDG00000018273	-	80	46.199	ENSEASG00005006910	ZNF32	71	46.199	Equus_asinus_asinus
ENSSLDG00000018273	-	80	46.199	ENSECAG00000023676	ZNF32	71	46.199	Equus_caballus
ENSSLDG00000018273	-	94	47.368	ENSELUG00000021229	-	90	38.542	Esox_lucius
ENSSLDG00000018273	-	90	45.000	ENSFHEG00000000678	-	79	45.000	Fundulus_heteroclitus
ENSSLDG00000018273	-	81	51.351	ENSFHEG00000018063	-	89	51.351	Fundulus_heteroclitus
ENSSLDG00000018273	-	80	51.931	ENSGAFG00000020499	-	61	51.931	Gambusia_affinis
ENSSLDG00000018273	-	79	43.939	ENSGACG00000010352	si:ch211-207i20.2	61	43.939	Gasterosteus_aculeatus
ENSSLDG00000018273	-	88	50.857	ENSHBUG00000015166	-	82	51.724	Haplochromis_burtoni
ENSSLDG00000018273	-	77	56.931	ENSHBUG00000021003	-	96	56.931	Haplochromis_burtoni
ENSSLDG00000018273	-	80	39.024	ENSHBUG00000013296	-	96	37.872	Haplochromis_burtoni
ENSSLDG00000018273	-	80	47.368	ENSIPUG00000023761	-	62	47.368	Ictalurus_punctatus
ENSSLDG00000018273	-	86	48.198	ENSIPUG00000005733	-	69	48.198	Ictalurus_punctatus
ENSSLDG00000018273	-	81	49.099	ENSIPUG00000022741	-	79	49.099	Ictalurus_punctatus
ENSSLDG00000018273	-	76	51.020	ENSIPUG00000021998	-	90	51.020	Ictalurus_punctatus
ENSSLDG00000018273	-	82	52.195	ENSIPUG00000002655	-	98	52.195	Ictalurus_punctatus
ENSSLDG00000018273	-	79	46.512	ENSLBEG00000020128	-	95	46.875	Labrus_bergylta
ENSSLDG00000018273	-	96	46.753	ENSMAMG00000014734	-	67	45.033	Mastacembelus_armatus
ENSSLDG00000018273	-	90	50.661	ENSMZEG00005025343	-	99	52.137	Maylandia_zebra
ENSSLDG00000018273	-	80	41.538	ENSMZEG00005020162	-	73	41.538	Maylandia_zebra
ENSSLDG00000018273	-	84	41.250	ENSMZEG00005012715	-	76	41.250	Maylandia_zebra
ENSSLDG00000018273	-	83	51.327	ENSMZEG00005026082	-	80	47.619	Maylandia_zebra
ENSSLDG00000018273	-	91	53.153	ENSMZEG00005019918	-	93	53.153	Maylandia_zebra
ENSSLDG00000018273	-	92	51.724	ENSMZEG00005003336	-	96	45.946	Maylandia_zebra
ENSSLDG00000018273	-	93	51.786	ENSMZEG00005021052	-	77	51.786	Maylandia_zebra
ENSSLDG00000018273	-	84	37.131	ENSMZEG00005020156	-	81	41.117	Maylandia_zebra
ENSSLDG00000018273	-	89	54.878	ENSMZEG00005007262	-	92	54.878	Maylandia_zebra
ENSSLDG00000018273	-	88	39.286	ENSMZEG00005014592	-	94	39.286	Maylandia_zebra
ENSSLDG00000018273	-	90	56.000	ENSMMOG00000010703	-	100	56.000	Mola_mola
ENSSLDG00000018273	-	97	51.880	ENSMMOG00000004460	-	93	51.880	Mola_mola
ENSSLDG00000018273	-	95	52.036	ENSMMOG00000006131	-	87	52.036	Mola_mola
ENSSLDG00000018273	-	95	50.211	ENSMALG00000007051	-	100	53.636	Monopterus_albus
ENSSLDG00000018273	-	90	52.814	ENSMALG00000004216	-	92	52.814	Monopterus_albus
ENSSLDG00000018273	-	90	52.232	ENSMALG00000015655	-	100	49.741	Monopterus_albus
ENSSLDG00000018273	-	80	50.862	MGP_PahariEiJ_G0022533	Zfp637	71	46.739	Mus_pahari
ENSSLDG00000018273	-	85	46.739	MGP_SPRETEiJ_G0029809	Zfp637	73	46.739	Mus_spretus
ENSSLDG00000018273	-	80	46.784	ENSNGAG00000020281	Zfp637	71	46.784	Nannospalax_galili
ENSSLDG00000018273	-	91	40.000	ENSNBRG00000005805	-	99	40.000	Neolamprologus_brichardi
ENSSLDG00000018273	-	84	41.176	ENSNBRG00000005796	-	96	41.176	Neolamprologus_brichardi
ENSSLDG00000018273	-	82	55.157	ENSNBRG00000000523	-	66	55.157	Neolamprologus_brichardi
ENSSLDG00000018273	-	84	43.617	ENSNBRG00000005849	-	91	43.617	Neolamprologus_brichardi
ENSSLDG00000018273	-	89	49.580	ENSNBRG00000003000	-	80	49.580	Neolamprologus_brichardi
ENSSLDG00000018273	-	84	42.512	ENSNBRG00000016564	-	83	42.512	Neolamprologus_brichardi
ENSSLDG00000018273	-	84	36.948	ENSONIG00000015552	-	95	36.948	Oreochromis_niloticus
ENSSLDG00000018273	-	89	44.196	ENSONIG00000015514	-	89	44.196	Oreochromis_niloticus
ENSSLDG00000018273	-	80	43.902	ENSONIG00000005693	-	98	43.902	Oreochromis_niloticus
ENSSLDG00000018273	-	80	46.199	ENSOARG00000002999	ZNF32	71	46.199	Ovis_aries
ENSSLDG00000018273	-	89	40.304	ENSPKIG00000014786	-	50	40.304	Paramormyrops_kingsleyae
ENSSLDG00000018273	-	81	47.186	ENSPLAG00000015973	-	100	47.186	Poecilia_latipinna
ENSSLDG00000018273	-	94	48.649	ENSPMEG00000016458	-	97	51.942	Poecilia_mexicana
ENSSLDG00000018273	-	97	46.639	ENSPMEG00000006726	-	98	49.618	Poecilia_mexicana
ENSSLDG00000018273	-	88	50.000	ENSPREG00000010437	-	83	50.000	Poecilia_reticulata
ENSSLDG00000018273	-	88	48.649	ENSPCAG00000005270	-	91	48.649	Procavia_capensis
ENSSLDG00000018273	-	83	50.893	ENSPVAG00000009430	-	64	50.893	Pteropus_vampyrus
ENSSLDG00000018273	-	96	43.939	ENSPNYG00000007597	-	87	43.939	Pundamilia_nyererei
ENSSLDG00000018273	-	96	53.448	ENSPNYG00000002684	-	99	54.054	Pundamilia_nyererei
ENSSLDG00000018273	-	77	44.737	ENSPNAG00000029997	-	95	40.659	Pygocentrus_nattereri
ENSSLDG00000018273	-	87	45.455	ENSSFOG00015015878	-	97	45.455	Scleropages_formosus
ENSSLDG00000018273	-	90	55.779	ENSSDUG00000015182	-	84	55.779	Seriola_dumerili
ENSSLDG00000018273	-	92	50.833	ENSSDUG00000015159	-	95	50.833	Seriola_dumerili
ENSSLDG00000018273	-	90	55.303	ENSSDUG00000015254	-	96	52.727	Seriola_dumerili
ENSSLDG00000018273	-	94	51.977	ENSSDUG00000008943	-	99	56.621	Seriola_dumerili
ENSSLDG00000018273	-	80	49.576	ENSSARG00000000532	-	85	49.576	Sorex_araneus
ENSSLDG00000018273	-	96	51.053	ENSXCOG00000008116	-	98	50.220	Xiphophorus_couchianus