EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000018285 (Gene tree)
Gene ID: -
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 10849 bases
Position: chrPEQF01099274.1:345147-355995
Accession: 111669414
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000023434	RNA_pol_A_bac	PF01000.26	4.9e-31	1	1
ENSSLDP00000023446	RNA_pol_A_bac	PF01000.26	5.7e-27	1	1
ENSSLDP00000023446	RNA_pol_L	PF01193.24	1.2e-23	1	1
ENSSLDP00000023434	RNA_pol_L	PF01193.24	2.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000024199	-	891	-	ENSSLDP00000023446	296 (aa)	-	-
ENSSLDT00000024188	-	1261	XM_023425696	ENSSLDP00000023434	384 (aa)	XP_023281464	-

Gene Model

Click here to download ENSSLDG00000018285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018285	polr1c	100	72.054	ENSG00000171453	POLR1C	100	75.806	Homo_sapiens
ENSSLDG00000018285	polr1c	91	90.883	ENSAPOG00000024356	polr1c	100	90.883	Acanthochromis_polyacanthus
ENSSLDG00000018285	polr1c	92	73.864	ENSAMEG00000012205	POLR1C	99	73.295	Ailuropoda_melanoleuca
ENSSLDG00000018285	polr1c	86	80.665	ENSACIG00000016268	polr1c	91	80.665	Amphilophus_citrinellus
ENSSLDG00000018285	polr1c	94	88.398	ENSAOCG00000011687	polr1c	100	88.398	Amphiprion_ocellaris
ENSSLDG00000018285	polr1c	91	90.598	ENSAPEG00000002433	polr1c	100	90.598	Amphiprion_percula
ENSSLDG00000018285	polr1c	90	94.236	ENSATEG00000005985	polr1c	99	93.696	Anabas_testudineus
ENSSLDG00000018285	polr1c	79	72.039	ENSAPLG00000002908	POLR1C	100	71.382	Anas_platyrhynchos
ENSSLDG00000018285	polr1c	86	69.578	ENSACAG00000009764	POLR1C	93	69.277	Anolis_carolinensis
ENSSLDG00000018285	polr1c	100	72.391	ENSANAG00000025805	POLR1C	100	72.391	Aotus_nancymaae
ENSSLDG00000018285	polr1c	100	91.919	ENSACLG00000006573	polr1c	100	92.308	Astatotilapia_calliptera
ENSSLDG00000018285	polr1c	58	30.769	ENSACLG00000004854	polr2c	78	31.500	Astatotilapia_calliptera
ENSSLDG00000018285	polr1c	100	83.502	ENSAMXG00000012062	polr1c	100	83.502	Astyanax_mexicanus
ENSSLDG00000018285	polr1c	91	73.066	ENSBTAG00000018969	POLR1C	99	72.779	Bos_taurus
ENSSLDG00000018285	polr1c	91	45.730	WBGene00019275	rpac-40	98	45.179	Caenorhabditis_elegans
ENSSLDG00000018285	polr1c	100	72.054	ENSCJAG00000005594	POLR1C	100	72.054	Callithrix_jacchus
ENSSLDG00000018285	polr1c	91	72.779	ENSCAFG00000001872	POLR1C	99	72.206	Canis_familiaris
ENSSLDG00000018285	polr1c	91	72.779	ENSCAFG00020012018	POLR1C	99	72.206	Canis_lupus_dingo
ENSSLDG00000018285	polr1c	58	32.967	ENSCAFG00020007660	POLR2C	60	31.336	Canis_lupus_dingo
ENSSLDG00000018285	polr1c	91	73.066	ENSCHIG00000004352	POLR1C	99	72.493	Capra_hircus
ENSSLDG00000018285	polr1c	99	72.203	ENSTSYG00000011921	POLR1C	99	72.443	Carlito_syrichta
ENSSLDG00000018285	polr1c	79	74.257	ENSCAPG00000015364	POLR1C	88	73.597	Cavia_aperea
ENSSLDG00000018285	polr1c	91	73.504	ENSCPOG00000038098	POLR1C	100	72.934	Cavia_porcellus
ENSSLDG00000018285	polr1c	99	71.864	ENSCCAG00000020169	POLR1C	99	71.920	Cebus_capucinus
ENSSLDG00000018285	polr1c	100	72.054	ENSCATG00000044045	POLR1C	100	72.365	Cercocebus_atys
ENSSLDG00000018285	polr1c	58	33.516	ENSCLAG00000013676	POLR2C	52	31.797	Chinchilla_lanigera
ENSSLDG00000018285	polr1c	91	73.789	ENSCLAG00000009266	POLR1C	100	73.219	Chinchilla_lanigera
ENSSLDG00000018285	polr1c	91	71.795	ENSCSAG00000011913	POLR1C	100	71.510	Chlorocebus_sabaeus
ENSSLDG00000018285	polr1c	55	69.340	ENSCHOG00000006601	POLR1C	100	69.340	Choloepus_hoffmanni
ENSSLDG00000018285	polr1c	91	74.785	ENSCPBG00000025203	POLR1C	99	74.212	Chrysemys_picta_bellii
ENSSLDG00000018285	polr1c	91	54.155	ENSCING00000003563	-	99	54.155	Ciona_intestinalis
ENSSLDG00000018285	polr1c	100	72.391	ENSCANG00000043167	POLR1C	100	72.391	Colobus_angolensis_palliatus
ENSSLDG00000018285	polr1c	91	71.920	ENSCGRG00001017533	Polr1c	99	71.347	Cricetulus_griseus_chok1gshd
ENSSLDG00000018285	polr1c	79	73.267	ENSCGRG00000013225	Polr1c	100	72.607	Cricetulus_griseus_crigri
ENSSLDG00000018285	polr1c	91	87.749	ENSCSEG00000018097	polr1c	100	86.895	Cynoglossus_semilaevis
ENSSLDG00000018285	polr1c	55	91.981	ENSCVAG00000005684	polr1c	85	91.981	Cyprinodon_variegatus
ENSSLDG00000018285	polr1c	93	81.742	ENSDARG00000039400	polr1c	97	80.899	Danio_rerio
ENSSLDG00000018285	polr1c	91	73.789	ENSDNOG00000042693	POLR1C	100	73.219	Dasypus_novemcinctus
ENSSLDG00000018285	polr1c	91	73.639	ENSDORG00000000429	Polr1c	99	73.066	Dipodomys_ordii
ENSSLDG00000018285	polr1c	83	54.259	FBgn0031657	CG3756	93	52.366	Drosophila_melanogaster
ENSSLDG00000018285	polr1c	91	69.628	ENSETEG00000010807	POLR1C	99	69.341	Echinops_telfairi
ENSSLDG00000018285	polr1c	90	68.023	ENSEBUG00000013725	polr1c	98	67.442	Eptatretus_burgeri
ENSSLDG00000018285	polr1c	91	72.493	ENSEASG00005003338	POLR1C	99	71.920	Equus_asinus_asinus
ENSSLDG00000018285	polr1c	99	72.203	ENSECAG00000023516	POLR1C	99	72.203	Equus_caballus
ENSSLDG00000018285	polr1c	91	74.212	ENSEEUG00000005471	POLR1C	99	73.639	Erinaceus_europaeus
ENSSLDG00000018285	polr1c	100	85.185	ENSELUG00000013027	polr1c	100	85.185	Esox_lucius
ENSSLDG00000018285	polr1c	99	72.881	ENSFCAG00000009735	POLR1C	99	72.881	Felis_catus
ENSSLDG00000018285	polr1c	85	71.560	ENSFALG00000012111	POLR1C	100	70.948	Ficedula_albicollis
ENSSLDG00000018285	polr1c	91	72.779	ENSFDAG00000008428	POLR1C	99	72.206	Fukomys_damarensis
ENSSLDG00000018285	polr1c	100	89.865	ENSFHEG00000000262	polr1c	100	89.865	Fundulus_heteroclitus
ENSSLDG00000018285	polr1c	58	84.659	ENSFHEG00000013867	-	84	87.861	Fundulus_heteroclitus
ENSSLDG00000018285	polr1c	85	81.707	ENSGMOG00000013878	polr1c	100	81.098	Gadus_morhua
ENSSLDG00000018285	polr1c	91	72.493	ENSGALG00000010349	POLR1C	99	71.920	Gallus_gallus
ENSSLDG00000018285	polr1c	91	90.313	ENSGAFG00000010153	polr1c	100	90.313	Gambusia_affinis
ENSSLDG00000018285	polr1c	93	87.560	ENSGACG00000002453	polr1c	100	89.174	Gasterosteus_aculeatus
ENSSLDG00000018285	polr1c	90	74.493	ENSGAGG00000010640	POLR1C	99	73.913	Gopherus_agassizii
ENSSLDG00000018285	polr1c	100	72.054	ENSGGOG00000010903	POLR1C	100	72.080	Gorilla_gorilla
ENSSLDG00000018285	polr1c	91	82.336	ENSHBUG00000017816	polr1c	100	81.481	Haplochromis_burtoni
ENSSLDG00000018285	polr1c	58	30.769	ENSHBUG00000023040	polr2c	78	31.500	Haplochromis_burtoni
ENSSLDG00000018285	polr1c	91	72.493	ENSHGLG00000019441	POLR1C	99	71.920	Heterocephalus_glaber_female
ENSSLDG00000018285	polr1c	91	72.779	ENSHGLG00100005970	POLR1C	99	72.206	Heterocephalus_glaber_male
ENSSLDG00000018285	polr1c	90	84.058	ENSHCOG00000002179	polr1c	99	84.058	Hippocampus_comes
ENSSLDG00000018285	polr1c	90	84.150	ENSIPUG00000024464	polr1c	99	83.573	Ictalurus_punctatus
ENSSLDG00000018285	polr1c	91	72.779	ENSSTOG00000010631	POLR1C	99	72.206	Ictidomys_tridecemlineatus
ENSSLDG00000018285	polr1c	58	33.516	ENSSTOG00000015150	-	50	31.797	Ictidomys_tridecemlineatus
ENSSLDG00000018285	polr1c	91	72.779	ENSJJAG00000023110	Polr1c	99	72.206	Jaculus_jaculus
ENSSLDG00000018285	polr1c	100	88.514	ENSKMAG00000014305	polr1c	100	88.514	Kryptolebias_marmoratus
ENSSLDG00000018285	polr1c	91	92.023	ENSLBEG00000014925	polr1c	100	92.023	Labrus_bergylta
ENSSLDG00000018285	polr1c	94	58.025	ENSLACG00000012567	POLR1C	98	59.226	Latimeria_chalumnae
ENSSLDG00000018285	polr1c	92	79.830	ENSLOCG00000016710	polr1c	96	79.261	Lepisosteus_oculatus
ENSSLDG00000018285	polr1c	58	32.203	ENSLAFG00000027230	POLR2C	74	30.660	Loxodonta_africana
ENSSLDG00000018285	polr1c	79	74.098	ENSLAFG00000026248	POLR1C	100	73.443	Loxodonta_africana
ENSSLDG00000018285	polr1c	100	71.717	ENSMFAG00000046295	POLR1C	100	72.080	Macaca_fascicularis
ENSSLDG00000018285	polr1c	100	71.717	ENSMMUG00000015192	POLR1C	100	72.080	Macaca_mulatta
ENSSLDG00000018285	polr1c	100	71.717	ENSMNEG00000028073	POLR1C	100	72.080	Macaca_nemestrina
ENSSLDG00000018285	polr1c	100	71.717	ENSMLEG00000034818	POLR1C	100	72.080	Mandrillus_leucophaeus
ENSSLDG00000018285	polr1c	100	91.582	ENSMAMG00000008700	polr1c	100	92.023	Mastacembelus_armatus
ENSSLDG00000018285	polr1c	100	91.582	ENSMZEG00005018545	polr1c	100	92.023	Maylandia_zebra
ENSSLDG00000018285	polr1c	77	69.153	ENSMGAG00000011020	POLR1C	100	68.475	Meleagris_gallopavo
ENSSLDG00000018285	polr1c	91	72.206	ENSMAUG00000014329	Polr1c	99	71.633	Mesocricetus_auratus
ENSSLDG00000018285	polr1c	99	71.186	ENSMICG00000005027	POLR1C	99	71.186	Microcebus_murinus
ENSSLDG00000018285	polr1c	91	72.493	ENSMOCG00000017549	Polr1c	99	71.920	Microtus_ochrogaster
ENSSLDG00000018285	polr1c	100	87.500	ENSMMOG00000005380	polr1c	100	87.500	Mola_mola
ENSSLDG00000018285	polr1c	77	73.898	ENSMODG00000018964	POLR1C	100	73.559	Monodelphis_domestica
ENSSLDG00000018285	polr1c	100	91.919	ENSMALG00000011711	polr1c	100	91.919	Monopterus_albus
ENSSLDG00000018285	polr1c	91	63.610	MGP_CAROLIEiJ_G0021662	Polr1c	100	71.212	Mus_caroli
ENSSLDG00000018285	polr1c	91	72.493	ENSMUSG00000067148	Polr1c	100	71.591	Mus_musculus
ENSSLDG00000018285	polr1c	91	73.352	MGP_PahariEiJ_G0020654	Polr1c	100	72.348	Mus_pahari
ENSSLDG00000018285	polr1c	91	72.493	MGP_SPRETEiJ_G0022574	Polr1c	100	71.591	Mus_spretus
ENSSLDG00000018285	polr1c	92	73.011	ENSMPUG00000012916	POLR1C	91	72.443	Mustela_putorius_furo
ENSSLDG00000018285	polr1c	92	73.011	ENSMLUG00000017751	POLR1C	100	72.443	Myotis_lucifugus
ENSSLDG00000018285	polr1c	91	72.493	ENSNGAG00000023487	Polr1c	100	72.881	Nannospalax_galili
ENSSLDG00000018285	polr1c	100	92.230	ENSNBRG00000018742	polr1c	100	92.230	Neolamprologus_brichardi
ENSSLDG00000018285	polr1c	91	72.934	ENSNLEG00000004035	POLR1C	100	72.365	Nomascus_leucogenys
ENSSLDG00000018285	polr1c	100	62.536	ENSMEUG00000006778	POLR1C	100	62.536	Notamacropus_eugenii
ENSSLDG00000018285	polr1c	80	68.354	ENSOPRG00000000145	POLR1C	99	71.852	Ochotona_princeps
ENSSLDG00000018285	polr1c	57	70.642	ENSODEG00000017109	-	97	70.755	Octodon_degus
ENSSLDG00000018285	polr1c	91	73.504	ENSODEG00000015831	-	100	72.934	Octodon_degus
ENSSLDG00000018285	polr1c	92	92.330	ENSONIG00000013133	polr1c	99	92.330	Oreochromis_niloticus
ENSSLDG00000018285	polr1c	91	70.774	ENSOANG00000003043	POLR1C	99	70.201	Ornithorhynchus_anatinus
ENSSLDG00000018285	polr1c	92	71.591	ENSOCUG00000005504	POLR1C	100	71.023	Oryctolagus_cuniculus
ENSSLDG00000018285	polr1c	90	84.726	ENSORLG00000019743	polr1c	99	84.726	Oryzias_latipes
ENSSLDG00000018285	polr1c	90	85.591	ENSORLG00020006489	POLR1C	99	85.591	Oryzias_latipes_hni
ENSSLDG00000018285	polr1c	70	67.153	ENSORLG00020005555	polr1c	81	66.667	Oryzias_latipes_hni
ENSSLDG00000018285	polr1c	90	84.726	ENSORLG00015013322	polr1c	99	84.726	Oryzias_latipes_hsok
ENSSLDG00000018285	polr1c	90	86.087	ENSOMEG00000016527	polr1c	98	86.087	Oryzias_melastigma
ENSSLDG00000018285	polr1c	91	72.206	ENSOGAG00000016318	POLR1C	99	71.347	Otolemur_garnettii
ENSSLDG00000018285	polr1c	91	72.779	ENSOARG00000007503	POLR1C	99	72.493	Ovis_aries
ENSSLDG00000018285	polr1c	100	72.054	ENSPPAG00000043678	POLR1C	100	72.080	Pan_paniscus
ENSSLDG00000018285	polr1c	99	72.881	ENSPPRG00000009760	POLR1C	99	72.881	Panthera_pardus
ENSSLDG00000018285	polr1c	99	72.881	ENSPTIG00000014813	POLR1C	99	72.881	Panthera_tigris_altaica
ENSSLDG00000018285	polr1c	100	72.054	ENSPTRG00000018202	POLR1C	100	72.080	Pan_troglodytes
ENSSLDG00000018285	polr1c	100	72.054	ENSPANG00000009025	POLR1C	100	72.054	Papio_anubis
ENSSLDG00000018285	polr1c	100	81.818	ENSPKIG00000009858	polr1c	100	81.818	Paramormyrops_kingsleyae
ENSSLDG00000018285	polr1c	92	74.148	ENSPSIG00000012580	POLR1C	95	73.580	Pelodiscus_sinensis
ENSSLDG00000018285	polr1c	100	88.215	ENSPMGG00000012121	polr1c	100	88.215	Periophthalmus_magnuspinnatus
ENSSLDG00000018285	polr1c	58	30.769	ENSPMGG00000021249	polr2c	81	31.019	Periophthalmus_magnuspinnatus
ENSSLDG00000018285	polr1c	91	72.206	ENSPEMG00000006970	Polr1c	99	71.633	Peromyscus_maniculatus_bairdii
ENSSLDG00000018285	polr1c	58	34.066	ENSPMAG00000004827	polr2c	81	34.000	Petromyzon_marinus
ENSSLDG00000018285	polr1c	90	71.714	ENSPMAG00000005560	polr1c	99	71.143	Petromyzon_marinus
ENSSLDG00000018285	polr1c	100	73.064	ENSPCIG00000028137	POLR1C	100	73.064	Phascolarctos_cinereus
ENSSLDG00000018285	polr1c	91	90.028	ENSPFOG00000014342	POLR1C	100	90.028	Poecilia_formosa
ENSSLDG00000018285	polr1c	92	89.548	ENSPFOG00000014357	polr1c	99	89.548	Poecilia_formosa
ENSSLDG00000018285	polr1c	55	91.038	ENSPLAG00000004111	polr1c	99	81.915	Poecilia_latipinna
ENSSLDG00000018285	polr1c	100	88.215	ENSPMEG00000011877	-	100	90.028	Poecilia_mexicana
ENSSLDG00000018285	polr1c	100	88.215	ENSPMEG00000008420	polr1c	100	90.028	Poecilia_mexicana
ENSSLDG00000018285	polr1c	91	88.889	ENSPREG00000007985	polr1c	100	88.604	Poecilia_reticulata
ENSSLDG00000018285	polr1c	91	72.365	ENSPPYG00000016645	POLR1C	100	71.795	Pongo_abelii
ENSSLDG00000018285	polr1c	99	71.864	ENSPCOG00000024628	POLR1C	99	71.864	Propithecus_coquereli
ENSSLDG00000018285	polr1c	91	67.049	ENSPVAG00000005689	POLR1C	99	67.049	Pteropus_vampyrus
ENSSLDG00000018285	polr1c	91	92.023	ENSPNYG00000003620	polr1c	100	92.023	Pundamilia_nyererei
ENSSLDG00000018285	polr1c	91	83.761	ENSPNAG00000008443	polr1c	100	83.191	Pygocentrus_nattereri
ENSSLDG00000018285	polr1c	91	72.493	ENSRNOG00000019079	Polr1c	99	71.920	Rattus_norvegicus
ENSSLDG00000018285	polr1c	100	72.391	ENSRBIG00000007155	POLR1C	100	72.391	Rhinopithecus_bieti
ENSSLDG00000018285	polr1c	100	72.391	ENSRROG00000000257	POLR1C	100	72.391	Rhinopithecus_roxellana
ENSSLDG00000018285	polr1c	83	48.428	YPR110C	RPC40	94	48.428	Saccharomyces_cerevisiae
ENSSLDG00000018285	polr1c	50	31.000	YIL021W	RPB3	55	31.000	Saccharomyces_cerevisiae
ENSSLDG00000018285	polr1c	99	71.864	ENSSBOG00000025735	POLR1C	99	71.935	Saimiri_boliviensis_boliviensis
ENSSLDG00000018285	polr1c	91	65.527	ENSSHAG00000014456	POLR1C	100	65.242	Sarcophilus_harrisii
ENSSLDG00000018285	polr1c	91	83.191	ENSSFOG00015019860	polr1c	100	82.621	Scleropages_formosus
ENSSLDG00000018285	polr1c	91	91.453	ENSSMAG00000018865	polr1c	100	90.313	Scophthalmus_maximus
ENSSLDG00000018285	polr1c	100	99.324	ENSSDUG00000015745	polr1c	100	99.324	Seriola_dumerili
ENSSLDG00000018285	polr1c	90	71.594	ENSSPUG00000011822	POLR1C	99	71.014	Sphenodon_punctatus
ENSSLDG00000018285	polr1c	91	91.453	ENSSPAG00000022369	polr1c	100	91.453	Stegastes_partitus
ENSSLDG00000018285	polr1c	92	72.727	ENSSSCG00000028007	POLR1C	99	72.159	Sus_scrofa
ENSSLDG00000018285	polr1c	88	72.321	ENSTGUG00000009159	POLR1C	99	71.726	Taeniopygia_guttata
ENSSLDG00000018285	polr1c	100	85.570	ENSTRUG00000006264	polr1c	100	86.325	Takifugu_rubripes
ENSSLDG00000018285	polr1c	70	71.161	ENSTTRG00000006344	POLR1C	76	70.412	Tursiops_truncatus
ENSSLDG00000018285	polr1c	91	73.352	ENSUAMG00000025602	POLR1C	99	72.779	Ursus_americanus
ENSSLDG00000018285	polr1c	91	73.352	ENSUMAG00000005938	POLR1C	99	72.779	Ursus_maritimus
ENSSLDG00000018285	polr1c	99	72.542	ENSVVUG00000028922	POLR1C	99	72.542	Vulpes_vulpes
ENSSLDG00000018285	polr1c	91	68.286	ENSXETG00000010882	polr1c	99	67.714	Xenopus_tropicalis
ENSSLDG00000018285	polr1c	91	89.174	ENSXCOG00000014185	polr1c	100	88.319	Xiphophorus_couchianus
ENSSLDG00000018285	polr1c	91	89.744	ENSXMAG00000015076	polr1c	100	89.744	Xiphophorus_maculatus