EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000018369 (Gene tree)
Gene ID: -
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 5805 bases
Position: chrPEQF01098959.1:126239-132043
Accession: 111659467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000023550	ResIII	PF04851.15	2.4e-07	1	1
ENSSLDP00000023550	DEAD	PF00270.29	5.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000024307	-	2425	XM_023412436	ENSSLDP00000023550	562 (aa)	XP_023268204	UPI000C6FC793

Gene Model

Click here to download ENSSLDG00000018369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000018369	ddx56	71	30.467	ENSSLDG00000016999	ddx52	63	30.467
ENSSLDG00000018369	ddx56	69	30.653	ENSSLDG00000003692	ddx18	63	30.653
ENSSLDG00000018369	ddx56	71	30.244	ENSSLDG00000006958	ddx49	76	30.244
ENSSLDG00000018369	ddx56	78	30.822	ENSSLDG00000018142	ddx47	72	31.436
ENSSLDG00000018369	ddx56	74	32.143	ENSSLDG00000004114	ddx27	50	31.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018369	ddx56	98	64.991	ENSG00000136271	DDX56	98	69.613	Homo_sapiens
ENSSLDG00000018369	ddx56	100	92.349	ENSAPOG00000017113	ddx56	100	92.171	Acanthochromis_polyacanthus
ENSSLDG00000018369	ddx56	99	64.043	ENSAMEG00000017711	DDX56	99	63.327	Ailuropoda_melanoleuca
ENSSLDG00000018369	ddx56	95	76.164	ENSACIG00000013747	ddx56	99	86.885	Amphilophus_citrinellus
ENSSLDG00000018369	ddx56	89	92.600	ENSAOCG00000018059	ddx56	94	92.600	Amphiprion_ocellaris
ENSSLDG00000018369	ddx56	87	92.402	ENSAOCG00000015447	-	87	92.402	Amphiprion_ocellaris
ENSSLDG00000018369	ddx56	100	90.747	ENSAPEG00000007267	ddx56	100	90.214	Amphiprion_percula
ENSSLDG00000018369	ddx56	99	89.127	ENSATEG00000005279	ddx56	100	88.948	Anabas_testudineus
ENSSLDG00000018369	ddx56	100	86.121	ENSACLG00000020113	ddx56	100	85.765	Astatotilapia_calliptera
ENSSLDG00000018369	ddx56	99	77.419	ENSAMXG00000019357	ddx56	99	77.061	Astyanax_mexicanus
ENSSLDG00000018369	ddx56	99	64.758	ENSBTAG00000010602	DDX56	99	63.864	Bos_taurus
ENSSLDG00000018369	ddx56	96	40.506	WBGene00016073	C24H12.4	86	39.964	Caenorhabditis_elegans
ENSSLDG00000018369	ddx56	99	65.062	ENSCJAG00000012233	DDX56	99	63.815	Callithrix_jacchus
ENSSLDG00000018369	ddx56	81	61.220	ENSCAFG00000029295	DDX56	99	60.784	Canis_familiaris
ENSSLDG00000018369	ddx56	94	63.904	ENSCAFG00020019695	DDX56	99	61.717	Canis_lupus_dingo
ENSSLDG00000018369	ddx56	99	64.758	ENSCHIG00000014261	DDX56	99	64.401	Capra_hircus
ENSSLDG00000018369	ddx56	99	64.937	ENSTSYG00000008048	DDX56	99	64.401	Carlito_syrichta
ENSSLDG00000018369	ddx56	86	63.278	ENSCAPG00000006286	DDX56	98	62.656	Cavia_aperea
ENSSLDG00000018369	ddx56	99	64.758	ENSCPOG00000003359	DDX56	99	64.222	Cavia_porcellus
ENSSLDG00000018369	ddx56	99	64.043	ENSCCAG00000025303	DDX56	99	64.286	Cebus_capucinus
ENSSLDG00000018369	ddx56	98	63.964	ENSCATG00000039389	DDX56	98	63.555	Cercocebus_atys
ENSSLDG00000018369	ddx56	99	64.758	ENSCLAG00000007666	DDX56	99	63.148	Chinchilla_lanigera
ENSSLDG00000018369	ddx56	98	64.171	ENSCSAG00000015636	DDX56	98	63.555	Chlorocebus_sabaeus
ENSSLDG00000018369	ddx56	98	70.450	ENSCPBG00000024556	DDX56	97	69.730	Chrysemys_picta_bellii
ENSSLDG00000018369	ddx56	90	61.569	ENSCING00000005185	-	98	61.404	Ciona_intestinalis
ENSSLDG00000018369	ddx56	89	60.516	ENSCSAVG00000011266	-	99	60.516	Ciona_savignyi
ENSSLDG00000018369	ddx56	98	64.171	ENSCANG00000028187	DDX56	98	63.914	Colobus_angolensis_palliatus
ENSSLDG00000018369	ddx56	98	65.517	ENSCGRG00001019019	Ddx56	98	64.738	Cricetulus_griseus_chok1gshd
ENSSLDG00000018369	ddx56	98	65.517	ENSCGRG00000011870	Ddx56	98	64.738	Cricetulus_griseus_crigri
ENSSLDG00000018369	ddx56	100	84.875	ENSCSEG00000008368	ddx56	100	84.520	Cynoglossus_semilaevis
ENSSLDG00000018369	ddx56	100	84.520	ENSCVAG00000006499	ddx56	100	84.342	Cyprinodon_variegatus
ENSSLDG00000018369	ddx56	99	79.679	ENSDARG00000020913	ddx56	99	79.501	Danio_rerio
ENSSLDG00000018369	ddx56	86	62.863	ENSDNOG00000036526	DDX56	97	62.397	Dasypus_novemcinctus
ENSSLDG00000018369	ddx56	99	50.714	FBgn0001565	Hlc	90	53.307	Drosophila_melanogaster
ENSSLDG00000018369	ddx56	85	45.417	ENSETEG00000019559	-	99	44.792	Echinops_telfairi
ENSSLDG00000018369	ddx56	63	77.778	ENSETEG00000002969	-	64	77.778	Echinops_telfairi
ENSSLDG00000018369	ddx56	98	65.946	ENSEBUG00000009986	ddx56	99	65.946	Eptatretus_burgeri
ENSSLDG00000018369	ddx56	90	67.387	ENSEASG00005017795	DDX56	98	63.423	Equus_asinus_asinus
ENSSLDG00000018369	ddx56	90	67.191	ENSECAG00000019897	DDX56	98	63.243	Equus_caballus
ENSSLDG00000018369	ddx56	80	66.000	ENSEEUG00000004849	DDX56	91	66.972	Erinaceus_europaeus
ENSSLDG00000018369	ddx56	100	84.342	ENSELUG00000004150	ddx56	100	83.630	Esox_lucius
ENSSLDG00000018369	ddx56	99	64.043	ENSFCAG00000010261	DDX56	99	63.327	Felis_catus
ENSSLDG00000018369	ddx56	99	64.580	ENSFDAG00000007128	DDX56	99	63.523	Fukomys_damarensis
ENSSLDG00000018369	ddx56	100	81.705	ENSFHEG00000018008	ddx56	96	88.000	Fundulus_heteroclitus
ENSSLDG00000018369	ddx56	100	75.844	ENSGAFG00000006906	ddx56	99	75.133	Gambusia_affinis
ENSSLDG00000018369	ddx56	97	69.620	ENSGAGG00000006789	DDX56	89	73.228	Gopherus_agassizii
ENSSLDG00000018369	ddx56	98	64.991	ENSGGOG00000012031	DDX56	98	63.734	Gorilla_gorilla
ENSSLDG00000018369	ddx56	95	81.308	ENSHBUG00000015246	ddx56	96	80.935	Haplochromis_burtoni
ENSSLDG00000018369	ddx56	99	64.043	ENSHGLG00000017271	DDX56	99	62.791	Heterocephalus_glaber_female
ENSSLDG00000018369	ddx56	99	64.043	ENSHGLG00100015731	DDX56	99	62.791	Heterocephalus_glaber_male
ENSSLDG00000018369	ddx56	100	83.126	ENSHCOG00000001685	ddx56	100	82.060	Hippocampus_comes
ENSSLDG00000018369	ddx56	98	78.040	ENSIPUG00000006602	ddx56	96	77.677	Ictalurus_punctatus
ENSSLDG00000018369	ddx56	99	64.937	ENSSTOG00000000464	DDX56	99	63.685	Ictidomys_tridecemlineatus
ENSSLDG00000018369	ddx56	98	64.324	ENSJJAG00000014269	Ddx56	99	63.964	Jaculus_jaculus
ENSSLDG00000018369	ddx56	99	85.027	ENSKMAG00000016611	ddx56	99	84.135	Kryptolebias_marmoratus
ENSSLDG00000018369	ddx56	99	89.982	ENSLBEG00000026281	ddx56	100	89.982	Labrus_bergylta
ENSSLDG00000018369	ddx56	99	72.531	ENSLACG00000015551	DDX56	97	72.352	Latimeria_chalumnae
ENSSLDG00000018369	ddx56	100	77.562	ENSLOCG00000015185	ddx56	100	76.814	Lepisosteus_oculatus
ENSSLDG00000018369	ddx56	99	65.179	ENSLAFG00000018206	DDX56	99	64.107	Loxodonta_africana
ENSSLDG00000018369	ddx56	98	63.964	ENSMFAG00000041001	DDX56	98	63.375	Macaca_fascicularis
ENSSLDG00000018369	ddx56	98	63.964	ENSMMUG00000002645	DDX56	98	63.375	Macaca_mulatta
ENSSLDG00000018369	ddx56	98	63.964	ENSMNEG00000028492	DDX56	98	63.375	Macaca_nemestrina
ENSSLDG00000018369	ddx56	98	64.324	ENSMLEG00000043591	DDX56	98	63.423	Mandrillus_leucophaeus
ENSSLDG00000018369	ddx56	100	89.502	ENSMAMG00000007776	ddx56	100	88.790	Mastacembelus_armatus
ENSSLDG00000018369	ddx56	100	86.121	ENSMZEG00005009813	ddx56	100	85.765	Maylandia_zebra
ENSSLDG00000018369	ddx56	98	65.225	ENSMICG00000005550	DDX56	99	64.273	Microcebus_murinus
ENSSLDG00000018369	ddx56	98	63.423	ENSMOCG00000016782	Ddx56	98	62.523	Microtus_ochrogaster
ENSSLDG00000018369	ddx56	100	82.624	ENSMMOG00000009654	ddx56	100	82.801	Mola_mola
ENSSLDG00000018369	ddx56	99	59.821	ENSMODG00000016137	DDX56	98	58.571	Monodelphis_domestica
ENSSLDG00000018369	ddx56	67	80.469	ENSMALG00000016910	ddx56	99	80.469	Monopterus_albus
ENSSLDG00000018369	ddx56	98	62.883	MGP_CAROLIEiJ_G0016069	Ddx56	98	67.339	Mus_caroli
ENSSLDG00000018369	ddx56	98	63.784	ENSMUSG00000004393	Ddx56	98	67.742	Mus_musculus
ENSSLDG00000018369	ddx56	98	63.604	MGP_PahariEiJ_G0016822	Ddx56	98	67.339	Mus_pahari
ENSSLDG00000018369	ddx56	98	63.784	MGP_SPRETEiJ_G0016911	Ddx56	98	67.742	Mus_spretus
ENSSLDG00000018369	ddx56	99	64.222	ENSMPUG00000018196	DDX56	87	63.506	Mustela_putorius_furo
ENSSLDG00000018369	ddx56	98	63.489	ENSMLUG00000003509	DDX56	98	62.770	Myotis_lucifugus
ENSSLDG00000018369	ddx56	98	65.225	ENSNGAG00000018785	Ddx56	98	63.784	Nannospalax_galili
ENSSLDG00000018369	ddx56	95	80.935	ENSNBRG00000002656	ddx56	96	80.748	Neolamprologus_brichardi
ENSSLDG00000018369	ddx56	98	64.811	ENSNLEG00000003816	DDX56	98	63.555	Nomascus_leucogenys
ENSSLDG00000018369	ddx56	89	61.706	ENSMEUG00000006788	DDX56	100	61.111	Notamacropus_eugenii
ENSSLDG00000018369	ddx56	98	62.883	ENSOPRG00000000292	-	98	62.342	Ochotona_princeps
ENSSLDG00000018369	ddx56	67	67.363	ENSODEG00000014807	DDX56	100	66.841	Octodon_degus
ENSSLDG00000018369	ddx56	100	82.918	ENSONIG00000011509	ddx56	99	82.206	Oreochromis_niloticus
ENSSLDG00000018369	ddx56	96	56.777	ENSOANG00000006320	-	80	73.401	Ornithorhynchus_anatinus
ENSSLDG00000018369	ddx56	72	56.341	ENSOANG00000015987	-	94	56.341	Ornithorhynchus_anatinus
ENSSLDG00000018369	ddx56	99	63.864	ENSOCUG00000022918	DDX56	99	63.815	Oryctolagus_cuniculus
ENSSLDG00000018369	ddx56	100	84.698	ENSORLG00000001434	ddx56	100	84.520	Oryzias_latipes
ENSSLDG00000018369	ddx56	100	84.342	ENSORLG00020015718	ddx56	97	84.164	Oryzias_latipes_hni
ENSSLDG00000018369	ddx56	99	84.670	ENSORLG00015003004	ddx56	96	84.492	Oryzias_latipes_hsok
ENSSLDG00000018369	ddx56	100	85.231	ENSOMEG00000022072	ddx56	99	85.053	Oryzias_melastigma
ENSSLDG00000018369	ddx56	99	64.884	ENSOGAG00000009981	DDX56	99	64.171	Otolemur_garnettii
ENSSLDG00000018369	ddx56	99	64.937	ENSOARG00000015240	DDX56	99	64.580	Ovis_aries
ENSSLDG00000018369	ddx56	99	53.654	ENSPPAG00000031263	-	99	52.931	Pan_paniscus
ENSSLDG00000018369	ddx56	98	62.367	ENSPPAG00000029147	DDX56	98	61.131	Pan_paniscus
ENSSLDG00000018369	ddx56	99	64.043	ENSPPRG00000014594	DDX56	99	64.043	Panthera_pardus
ENSSLDG00000018369	ddx56	95	56.691	ENSPTIG00000019500	DDX56	98	56.691	Panthera_tigris_altaica
ENSSLDG00000018369	ddx56	98	64.991	ENSPTRG00000019147	DDX56	98	63.734	Pan_troglodytes
ENSSLDG00000018369	ddx56	93	52.642	ENSPTRG00000052765	-	99	53.383	Pan_troglodytes
ENSSLDG00000018369	ddx56	98	63.929	ENSPANG00000002446	DDX56	98	63.375	Papio_anubis
ENSSLDG00000018369	ddx56	99	78.995	ENSPKIG00000018998	ddx56	99	77.917	Paramormyrops_kingsleyae
ENSSLDG00000018369	ddx56	95	84.299	ENSPMGG00000017421	ddx56	99	83.551	Periophthalmus_magnuspinnatus
ENSSLDG00000018369	ddx56	99	66.607	ENSPCIG00000009336	DDX56	98	65.530	Phascolarctos_cinereus
ENSSLDG00000018369	ddx56	100	83.630	ENSPFOG00000018658	ddx56	100	84.342	Poecilia_formosa
ENSSLDG00000018369	ddx56	100	83.808	ENSPLAG00000019208	ddx56	100	84.520	Poecilia_latipinna
ENSSLDG00000018369	ddx56	100	83.808	ENSPMEG00000001775	ddx56	100	84.342	Poecilia_mexicana
ENSSLDG00000018369	ddx56	100	84.164	ENSPREG00000015142	ddx56	100	84.164	Poecilia_reticulata
ENSSLDG00000018369	ddx56	98	64.991	ENSPPYG00000017591	DDX56	98	63.734	Pongo_abelii
ENSSLDG00000018369	ddx56	95	65.804	ENSPCAG00000011499	DDX56	99	64.325	Procavia_capensis
ENSSLDG00000018369	ddx56	99	64.937	ENSPCOG00000024864	DDX56	99	64.222	Propithecus_coquereli
ENSSLDG00000018369	ddx56	89	70.233	ENSPVAG00000000791	DDX56	88	70.233	Pteropus_vampyrus
ENSSLDG00000018369	ddx56	100	85.943	ENSPNYG00000019212	ddx56	100	85.587	Pundamilia_nyererei
ENSSLDG00000018369	ddx56	99	80.610	ENSPNAG00000025446	ddx56	99	80.610	Pygocentrus_nattereri
ENSSLDG00000018369	ddx56	98	63.604	ENSRNOG00000004670	Ddx56	98	62.883	Rattus_norvegicus
ENSSLDG00000018369	ddx56	98	64.171	ENSRBIG00000030140	DDX56	98	63.555	Rhinopithecus_bieti
ENSSLDG00000018369	ddx56	98	63.993	ENSRROG00000044428	DDX56	98	63.375	Rhinopithecus_roxellana
ENSSLDG00000018369	ddx56	97	42.929	YLR276C	-	91	45.588	Saccharomyces_cerevisiae
ENSSLDG00000018369	ddx56	99	64.528	ENSSBOG00000034339	DDX56	99	63.280	Saimiri_boliviensis_boliviensis
ENSSLDG00000018369	ddx56	85	66.667	ENSSHAG00000016615	DDX56	99	64.066	Sarcophilus_harrisii
ENSSLDG00000018369	ddx56	100	78.014	ENSSFOG00015012795	ddx56	100	77.660	Scleropages_formosus
ENSSLDG00000018369	ddx56	100	90.053	ENSSMAG00000011280	ddx56	99	91.604	Scophthalmus_maximus
ENSSLDG00000018369	ddx56	100	99.466	ENSSDUG00000023597	ddx56	100	99.466	Seriola_dumerili
ENSSLDG00000018369	ddx56	69	77.966	ENSSARG00000014363	DDX56	78	72.857	Sorex_araneus
ENSSLDG00000018369	ddx56	99	69.573	ENSSPUG00000000784	DDX56	96	69.217	Sphenodon_punctatus
ENSSLDG00000018369	ddx56	95	91.963	ENSSPAG00000009392	ddx56	99	91.776	Stegastes_partitus
ENSSLDG00000018369	ddx56	98	64.324	ENSSSCG00000016745	DDX56	99	64.505	Sus_scrofa
ENSSLDG00000018369	ddx56	100	86.372	ENSTRUG00000018623	ddx56	100	85.512	Takifugu_rubripes
ENSSLDG00000018369	ddx56	99	85.512	ENSTNIG00000013593	ddx56	100	85.512	Tetraodon_nigroviridis
ENSSLDG00000018369	ddx56	98	64.324	ENSTBEG00000007119	DDX56	98	63.784	Tupaia_belangeri
ENSSLDG00000018369	ddx56	84	63.291	ENSTTRG00000010552	DDX56	96	63.291	Tursiops_truncatus
ENSSLDG00000018369	ddx56	99	64.222	ENSUAMG00000014194	DDX56	99	63.506	Ursus_americanus
ENSSLDG00000018369	ddx56	99	64.222	ENSUMAG00000009666	DDX56	99	63.506	Ursus_maritimus
ENSSLDG00000018369	ddx56	99	63.327	ENSVVUG00000011905	DDX56	99	62.970	Vulpes_vulpes
ENSSLDG00000018369	ddx56	98	71.841	ENSXETG00000019000	ddx56	99	71.892	Xenopus_tropicalis
ENSSLDG00000018369	ddx56	100	78.648	ENSXCOG00000017413	ddx56	99	78.648	Xiphophorus_couchianus
ENSSLDG00000018369	ddx56	100	84.342	ENSXMAG00000018749	ddx56	100	84.342	Xiphophorus_maculatus