EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000018483 (Gene tree)
Gene ID: -
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 5791 bases
Position: chrPEQF01098998.1:3392910-3398700
Accession: 111660537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000023719	ResIII	PF04851.15	9.7e-06	1	1
ENSSLDP00000023719	DEAD	PF00270.29	2.1e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000024482	-	2685	XM_023413870	ENSSLDP00000023719	894 (aa)	XP_023269638	-

Gene Model

Click here to download ENSSLDG00000018483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000018483	ddx42	51	35.329	ENSSLDG00000018297	-	75	35.329
ENSSLDG00000018483	ddx42	63	40.484	ENSSLDG00000016854	ddx46	59	39.828
ENSSLDG00000018483	ddx42	50	36.017	ENSSLDG00000002762	-	72	35.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018483	ddx42	99	70.886	ENSG00000198231	DDX42	100	78.095	Homo_sapiens
ENSSLDG00000018483	ddx42	91	93.357	ENSAPOG00000017675	ddx42	97	93.023	Acanthochromis_polyacanthus
ENSSLDG00000018483	ddx42	100	71.822	ENSAMEG00000003200	DDX42	99	71.053	Ailuropoda_melanoleuca
ENSSLDG00000018483	ddx42	84	89.295	ENSACIG00000007376	ddx42	99	90.862	Amphilophus_citrinellus
ENSSLDG00000018483	ddx42	100	87.892	ENSAOCG00000003520	ddx42	100	91.948	Amphiprion_ocellaris
ENSSLDG00000018483	ddx42	100	90.076	ENSAPEG00000000984	ddx42	100	92.131	Amphiprion_percula
ENSSLDG00000018483	ddx42	100	90.471	ENSATEG00000022920	ddx42	100	90.909	Anabas_testudineus
ENSSLDG00000018483	ddx42	99	70.758	ENSAPLG00000010544	DDX42	99	70.563	Anas_platyrhynchos
ENSSLDG00000018483	ddx42	99	71.798	ENSACAG00000003994	DDX42	99	71.383	Anolis_carolinensis
ENSSLDG00000018483	ddx42	99	71.945	ENSANAG00000035693	DDX42	99	76.305	Aotus_nancymaae
ENSSLDG00000018483	ddx42	100	90.649	ENSACLG00000025113	ddx42	100	91.199	Astatotilapia_calliptera
ENSSLDG00000018483	ddx42	88	81.387	ENSAMXG00000011435	ddx42	100	77.581	Astyanax_mexicanus
ENSSLDG00000018483	ddx42	99	71.413	ENSBTAG00000021058	DDX42	92	80.945	Bos_taurus
ENSSLDG00000018483	ddx42	66	52.119	WBGene00008119	C46F11.4	79	52.167	Caenorhabditis_elegans
ENSSLDG00000018483	ddx42	99	71.915	ENSCJAG00000019649	DDX42	99	80.440	Callithrix_jacchus
ENSSLDG00000018483	ddx42	99	71.489	ENSCAFG00000012818	DDX42	99	71.429	Canis_familiaris
ENSSLDG00000018483	ddx42	99	71.489	ENSCAFG00020026631	DDX42	99	71.429	Canis_lupus_dingo
ENSSLDG00000018483	ddx42	100	72.000	ENSCHIG00000014431	DDX42	100	71.459	Capra_hircus
ENSSLDG00000018483	ddx42	100	70.719	ENSTSYG00000001380	DDX42	99	71.002	Carlito_syrichta
ENSSLDG00000018483	ddx42	73	60.207	ENSCAPG00000013621	DDX42	94	60.207	Cavia_aperea
ENSSLDG00000018483	ddx42	99	71.581	ENSCPOG00000005633	DDX42	99	71.720	Cavia_porcellus
ENSSLDG00000018483	ddx42	99	67.631	ENSCCAG00000020612	DDX42	92	79.818	Cebus_capucinus
ENSSLDG00000018483	ddx42	99	71.338	ENSCATG00000030490	DDX42	99	71.737	Cercocebus_atys
ENSSLDG00000018483	ddx42	99	72.805	ENSCLAG00000003497	DDX42	99	72.532	Chinchilla_lanigera
ENSSLDG00000018483	ddx42	99	67.786	ENSCSAG00000003914	DDX42	99	67.048	Chlorocebus_sabaeus
ENSSLDG00000018483	ddx42	64	87.273	ENSCHOG00000006241	DDX42	61	87.273	Choloepus_hoffmanni
ENSSLDG00000018483	ddx42	99	71.593	ENSCPBG00000026682	DDX42	99	70.601	Chrysemys_picta_bellii
ENSSLDG00000018483	ddx42	99	71.338	ENSCANG00000034663	DDX42	94	80.241	Colobus_angolensis_palliatus
ENSSLDG00000018483	ddx42	99	71.718	ENSCGRG00001009775	Ddx42	99	71.230	Cricetulus_griseus_chok1gshd
ENSSLDG00000018483	ddx42	99	71.718	ENSCGRG00000011718	Ddx42	99	71.230	Cricetulus_griseus_crigri
ENSSLDG00000018483	ddx42	100	86.608	ENSCSEG00000021574	ddx42	100	87.157	Cynoglossus_semilaevis
ENSSLDG00000018483	ddx42	100	85.841	ENSCVAG00000011404	ddx42	100	87.832	Cyprinodon_variegatus
ENSSLDG00000018483	ddx42	100	78.840	ENSDARG00000037928	ddx42	100	78.671	Danio_rerio
ENSSLDG00000018483	ddx42	99	69.504	ENSDNOG00000007961	DDX42	99	69.903	Dasypus_novemcinctus
ENSSLDG00000018483	ddx42	99	65.458	ENSDORG00000004199	Ddx42	99	65.773	Dipodomys_ordii
ENSSLDG00000018483	ddx42	67	58.900	FBgn0036104	CG6418	84	56.801	Drosophila_melanogaster
ENSSLDG00000018483	ddx42	85	71.117	ENSEBUG00000001155	ddx42	93	70.988	Eptatretus_burgeri
ENSSLDG00000018483	ddx42	100	71.070	ENSEASG00005013089	DDX42	94	79.580	Equus_asinus_asinus
ENSSLDG00000018483	ddx42	99	71.322	ENSECAG00000022684	DDX42	99	70.763	Equus_caballus
ENSSLDG00000018483	ddx42	60	94.286	ENSEEUG00000009144	DDX42	73	94.286	Erinaceus_europaeus
ENSSLDG00000018483	ddx42	100	79.979	ENSELUG00000020593	ddx42	100	79.233	Esox_lucius
ENSSLDG00000018483	ddx42	99	70.896	ENSFCAG00000003499	DDX42	99	71.642	Felis_catus
ENSSLDG00000018483	ddx42	98	70.640	ENSFALG00000004675	DDX42	79	71.205	Ficedula_albicollis
ENSSLDG00000018483	ddx42	99	72.359	ENSFDAG00000020516	DDX42	99	71.520	Fukomys_damarensis
ENSSLDG00000018483	ddx42	100	84.895	ENSFHEG00000023290	ddx42	100	86.880	Fundulus_heteroclitus
ENSSLDG00000018483	ddx42	88	82.553	ENSGMOG00000004595	ddx42	88	82.553	Gadus_morhua
ENSSLDG00000018483	ddx42	99	69.758	ENSGALG00000000581	DDX42	99	69.863	Gallus_gallus
ENSSLDG00000018483	ddx42	95	85.648	ENSGAFG00000011846	ddx42	94	87.734	Gambusia_affinis
ENSSLDG00000018483	ddx42	100	82.857	ENSGACG00000009782	ddx42	100	82.857	Gasterosteus_aculeatus
ENSSLDG00000018483	ddx42	99	70.903	ENSGAGG00000024411	DDX42	99	70.433	Gopherus_agassizii
ENSSLDG00000018483	ddx42	99	71.716	ENSGGOG00000006779	DDX42	92	80.000	Gorilla_gorilla
ENSSLDG00000018483	ddx42	100	90.539	ENSHBUG00000008705	ddx42	100	91.089	Haplochromis_burtoni
ENSSLDG00000018483	ddx42	99	68.483	ENSHGLG00000010024	DDX42	99	67.991	Heterocephalus_glaber_female
ENSSLDG00000018483	ddx42	99	71.383	ENSHGLG00100004479	-	99	71.429	Heterocephalus_glaber_male
ENSSLDG00000018483	ddx42	90	55.663	ENSHGLG00100007138	-	88	55.231	Heterocephalus_glaber_male
ENSSLDG00000018483	ddx42	100	79.047	ENSHCOG00000003357	ddx42	100	78.405	Hippocampus_comes
ENSSLDG00000018483	ddx42	100	77.049	ENSIPUG00000013327	ddx42	100	76.667	Ictalurus_punctatus
ENSSLDG00000018483	ddx42	99	71.825	ENSSTOG00000008922	DDX42	99	71.842	Ictidomys_tridecemlineatus
ENSSLDG00000018483	ddx42	100	72.103	ENSJJAG00000011727	Ddx42	99	72.541	Jaculus_jaculus
ENSSLDG00000018483	ddx42	100	85.870	ENSKMAG00000009914	ddx42	100	88.293	Kryptolebias_marmoratus
ENSSLDG00000018483	ddx42	100	79.694	ENSLBEG00000004687	ddx42	100	81.878	Labrus_bergylta
ENSSLDG00000018483	ddx42	99	72.492	ENSLACG00000013476	DDX42	97	74.508	Latimeria_chalumnae
ENSSLDG00000018483	ddx42	100	80.807	ENSLOCG00000011764	ddx42	100	80.153	Lepisosteus_oculatus
ENSSLDG00000018483	ddx42	100	72.359	ENSLAFG00000003249	DDX42	99	72.347	Loxodonta_africana
ENSSLDG00000018483	ddx42	99	71.444	ENSMFAG00000031356	DDX42	99	70.855	Macaca_fascicularis
ENSSLDG00000018483	ddx42	99	72.021	ENSMMUG00000016762	DDX42	91	80.152	Macaca_mulatta
ENSSLDG00000018483	ddx42	99	71.444	ENSMNEG00000038250	DDX42	99	70.855	Macaca_nemestrina
ENSSLDG00000018483	ddx42	99	70.992	ENSMLEG00000043080	DDX42	99	70.219	Mandrillus_leucophaeus
ENSSLDG00000018483	ddx42	91	91.758	ENSMAMG00000021888	ddx42	98	89.588	Mastacembelus_armatus
ENSSLDG00000018483	ddx42	100	90.649	ENSMZEG00005023103	ddx42	100	91.199	Maylandia_zebra
ENSSLDG00000018483	ddx42	99	69.968	ENSMGAG00000001822	DDX42	99	69.863	Meleagris_gallopavo
ENSSLDG00000018483	ddx42	72	80.090	ENSMAUG00000020774	-	88	80.090	Mesocricetus_auratus
ENSSLDG00000018483	ddx42	100	71.067	ENSMICG00000009952	DDX42	99	71.398	Microcebus_murinus
ENSSLDG00000018483	ddx42	99	71.996	ENSMOCG00000015504	Ddx42	99	71.321	Microtus_ochrogaster
ENSSLDG00000018483	ddx42	92	84.717	ENSMMOG00000016963	ddx42	87	84.434	Mola_mola
ENSSLDG00000018483	ddx42	51	82.516	ENSMODG00000009917	-	98	83.156	Monodelphis_domestica
ENSSLDG00000018483	ddx42	100	90.576	ENSMALG00000007800	ddx42	100	90.576	Monopterus_albus
ENSSLDG00000018483	ddx42	99	71.627	MGP_CAROLIEiJ_G0017314	Ddx42	99	71.674	Mus_caroli
ENSSLDG00000018483	ddx42	99	71.627	ENSMUSG00000020705	Ddx42	99	71.674	Mus_musculus
ENSSLDG00000018483	ddx42	74	84.650	MGP_PahariEiJ_G0018444	-	98	82.779	Mus_pahari
ENSSLDG00000018483	ddx42	99	71.734	MGP_SPRETEiJ_G0018158	Ddx42	99	71.781	Mus_spretus
ENSSLDG00000018483	ddx42	99	70.514	ENSMPUG00000014921	DDX42	99	70.632	Mustela_putorius_furo
ENSSLDG00000018483	ddx42	99	69.278	ENSMLUG00000011645	DDX42	99	69.033	Myotis_lucifugus
ENSSLDG00000018483	ddx42	99	72.874	ENSNGAG00000021897	Ddx42	99	72.678	Nannospalax_galili
ENSSLDG00000018483	ddx42	100	88.999	ENSNBRG00000004466	ddx42	100	89.769	Neolamprologus_brichardi
ENSSLDG00000018483	ddx42	99	72.543	ENSNLEG00000004248	DDX42	94	80.152	Nomascus_leucogenys
ENSSLDG00000018483	ddx42	76	69.640	ENSMEUG00000013227	-	71	69.640	Notamacropus_eugenii
ENSSLDG00000018483	ddx42	100	70.807	ENSOPRG00000014960	DDX42	99	70.501	Ochotona_princeps
ENSSLDG00000018483	ddx42	99	69.173	ENSODEG00000007810	DDX42	99	69.040	Octodon_degus
ENSSLDG00000018483	ddx42	100	90.539	ENSONIG00000000734	ddx42	100	91.419	Oreochromis_niloticus
ENSSLDG00000018483	ddx42	60	81.296	ENSOANG00000000265	DDX42	100	81.296	Ornithorhynchus_anatinus
ENSSLDG00000018483	ddx42	95	72.982	ENSOCUG00000004304	DDX42	86	73.439	Oryctolagus_cuniculus
ENSSLDG00000018483	ddx42	100	85.304	ENSORLG00000002395	ddx42	100	86.000	Oryzias_latipes
ENSSLDG00000018483	ddx42	100	87.417	ENSORLG00020011621	ddx42	100	87.638	Oryzias_latipes_hni
ENSSLDG00000018483	ddx42	100	87.528	ENSORLG00015004487	ddx42	100	87.748	Oryzias_latipes_hsok
ENSSLDG00000018483	ddx42	100	86.770	ENSOMEG00000020093	ddx42	100	88.534	Oryzias_melastigma
ENSSLDG00000018483	ddx42	99	71.489	ENSOGAG00000006872	DDX42	99	71.277	Otolemur_garnettii
ENSSLDG00000018483	ddx42	100	70.177	ENSOARG00000013540	DDX42	99	70.890	Ovis_aries
ENSSLDG00000018483	ddx42	99	71.822	ENSPPAG00000007496	DDX42	92	80.305	Pan_paniscus
ENSSLDG00000018483	ddx42	99	70.896	ENSPPRG00000002740	DDX42	99	71.535	Panthera_pardus
ENSSLDG00000018483	ddx42	99	70.957	ENSPTIG00000009932	DDX42	99	71.642	Panthera_tigris_altaica
ENSSLDG00000018483	ddx42	99	71.822	ENSPTRG00000009523	DDX42	92	80.305	Pan_troglodytes
ENSSLDG00000018483	ddx42	99	71.444	ENSPANG00000020990	DDX42	99	71.845	Papio_anubis
ENSSLDG00000018483	ddx42	100	77.753	ENSPKIG00000002901	ddx42	100	77.031	Paramormyrops_kingsleyae
ENSSLDG00000018483	ddx42	85	78.880	ENSPSIG00000010289	DDX42	95	78.880	Pelodiscus_sinensis
ENSSLDG00000018483	ddx42	91	83.051	ENSPMGG00000009323	ddx42	100	80.044	Periophthalmus_magnuspinnatus
ENSSLDG00000018483	ddx42	99	71.642	ENSPEMG00000006755	Ddx42	99	71.047	Peromyscus_maniculatus_bairdii
ENSSLDG00000018483	ddx42	85	70.528	ENSPMAG00000005580	ddx42	99	71.560	Petromyzon_marinus
ENSSLDG00000018483	ddx42	100	71.579	ENSPCIG00000009093	DDX42	99	71.233	Phascolarctos_cinereus
ENSSLDG00000018483	ddx42	100	83.548	ENSPFOG00000014104	ddx42	100	86.099	Poecilia_formosa
ENSSLDG00000018483	ddx42	100	83.226	ENSPLAG00000010522	ddx42	100	85.884	Poecilia_latipinna
ENSSLDG00000018483	ddx42	100	83.868	ENSPMEG00000010744	ddx42	100	85.470	Poecilia_mexicana
ENSSLDG00000018483	ddx42	100	82.664	ENSPREG00000009926	ddx42	100	84.534	Poecilia_reticulata
ENSSLDG00000018483	ddx42	99	68.875	ENSPPYG00000008531	DDX42	99	68.980	Pongo_abelii
ENSSLDG00000018483	ddx42	92	66.667	ENSPCAG00000002474	DDX42	100	66.437	Procavia_capensis
ENSSLDG00000018483	ddx42	99	61.416	ENSPCOG00000001559	DDX42	91	73.239	Propithecus_coquereli
ENSSLDG00000018483	ddx42	100	68.896	ENSPVAG00000000160	DDX42	99	68.239	Pteropus_vampyrus
ENSSLDG00000018483	ddx42	84	89.764	ENSPNYG00000013954	ddx42	97	90.289	Pundamilia_nyererei
ENSSLDG00000018483	ddx42	97	75.858	ENSPNAG00000017352	ddx42	100	79.347	Pygocentrus_nattereri
ENSSLDG00000018483	ddx42	99	71.734	ENSRNOG00000009474	Ddx42	99	71.674	Rattus_norvegicus
ENSSLDG00000018483	ddx42	99	71.792	ENSRBIG00000004781	DDX42	94	80.363	Rhinopithecus_bieti
ENSSLDG00000018483	ddx42	99	71.792	ENSRROG00000029794	DDX42	99	71.737	Rhinopithecus_roxellana
ENSSLDG00000018483	ddx42	99	71.565	ENSSBOG00000029624	DDX42	92	79.818	Saimiri_boliviensis_boliviensis
ENSSLDG00000018483	ddx42	100	71.203	ENSSHAG00000012896	-	99	70.755	Sarcophilus_harrisii
ENSSLDG00000018483	ddx42	70	49.321	ENSSHAG00000007919	-	99	49.319	Sarcophilus_harrisii
ENSSLDG00000018483	ddx42	82	87.433	ENSSFOG00015014064	ddx42	80	87.433	Scleropages_formosus
ENSSLDG00000018483	ddx42	100	88.487	ENSSMAG00000009077	ddx42	100	90.120	Scophthalmus_maximus
ENSSLDG00000018483	ddx42	100	97.427	ENSSDUG00000022221	ddx42	100	97.427	Seriola_dumerili
ENSSLDG00000018483	ddx42	99	70.327	ENSSARG00000009847	DDX42	99	70.222	Sorex_araneus
ENSSLDG00000018483	ddx42	99	72.543	ENSSPUG00000018806	DDX42	99	71.368	Sphenodon_punctatus
ENSSLDG00000018483	ddx42	100	91.209	ENSSPAG00000013055	ddx42	100	92.527	Stegastes_partitus
ENSSLDG00000018483	ddx42	85	69.742	ENSSSCG00000017289	DDX42	97	70.494	Sus_scrofa
ENSSLDG00000018483	ddx42	99	71.353	ENSTGUG00000001931	DDX42	99	71.291	Taeniopygia_guttata
ENSSLDG00000018483	ddx42	100	83.518	ENSTRUG00000010711	ddx42	99	88.789	Takifugu_rubripes
ENSSLDG00000018483	ddx42	82	77.036	ENSTBEG00000010159	DDX42	98	77.036	Tupaia_belangeri
ENSSLDG00000018483	ddx42	100	70.934	ENSTTRG00000006962	DDX42	99	70.750	Tursiops_truncatus
ENSSLDG00000018483	ddx42	100	71.716	ENSUAMG00000007321	DDX42	99	72.417	Ursus_americanus
ENSSLDG00000018483	ddx42	100	72.086	ENSUMAG00000017438	DDX42	99	72.086	Ursus_maritimus
ENSSLDG00000018483	ddx42	99	62.619	ENSVPAG00000009633	DDX42	94	75.497	Vicugna_pacos
ENSSLDG00000018483	ddx42	99	71.383	ENSVVUG00000006095	DDX42	99	71.642	Vulpes_vulpes
ENSSLDG00000018483	ddx42	100	71.746	ENSXETG00000003245	ddx42	100	70.370	Xenopus_tropicalis
ENSSLDG00000018483	ddx42	84	86.991	ENSXCOG00000017560	ddx42	97	88.699	Xiphophorus_couchianus
ENSSLDG00000018483	ddx42	100	87.805	ENSXMAG00000008138	ddx42	100	89.135	Xiphophorus_maculatus