EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000018493 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 5971 bases
Position: chrPEQF01098177.1:27355-33325
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	1	12
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	2	12
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	3	12
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	4	12
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	5	12
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	6	12
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	7	12
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	8	12
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	9	12
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	10	12
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	11	12
ENSSLDP00000023821	zf-C2H2	PF00096.26	5.4e-61	12	12
ENSSLDP00000023821	zf-met	PF12874.7	4e-19	1	2
ENSSLDP00000023821	zf-met	PF12874.7	4e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000024584	-	1260	-	ENSSLDP00000023821	419 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000018493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018493's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000018493	-	79	49.554	ENSSLDG00000020432	-	90	49.554
ENSSLDG00000018493	-	96	42.471	ENSSLDG00000000203	-	91	57.143
ENSSLDG00000018493	-	84	42.544	ENSSLDG00000000457	-	76	42.544
ENSSLDG00000018493	-	96	51.515	ENSSLDG00000020990	-	79	51.515
ENSSLDG00000018493	-	82	50.633	ENSSLDG00000007568	-	85	50.633
ENSSLDG00000018493	-	82	62.162	ENSSLDG00000004756	-	91	59.259
ENSSLDG00000018493	-	85	45.503	ENSSLDG00000015116	-	83	44.162
ENSSLDG00000018493	-	81	44.898	ENSSLDG00000013170	zbtb17	79	44.898
ENSSLDG00000018493	-	96	66.379	ENSSLDG00000005850	-	97	69.816
ENSSLDG00000018493	-	89	61.429	ENSSLDG00000010190	-	80	61.429
ENSSLDG00000018493	-	87	43.312	ENSSLDG00000013823	gfi1b	65	43.312
ENSSLDG00000018493	-	78	59.821	ENSSLDG00000004098	-	98	59.821
ENSSLDG00000018493	-	85	48.879	ENSSLDG00000000352	-	72	48.879
ENSSLDG00000018493	-	97	56.522	ENSSLDG00000020655	-	75	56.522
ENSSLDG00000018493	-	96	55.501	ENSSLDG00000007756	-	98	60.181
ENSSLDG00000018493	-	78	48.684	ENSSLDG00000001787	zbtb24	86	48.684
ENSSLDG00000018493	-	79	46.667	ENSSLDG00000001860	-	92	46.789
ENSSLDG00000018493	-	80	39.223	ENSSLDG00000013353	prdm5	84	39.223
ENSSLDG00000018493	-	96	48.824	ENSSLDG00000025676	-	76	48.824
ENSSLDG00000018493	-	83	39.516	ENSSLDG00000002776	-	70	39.595
ENSSLDG00000018493	-	82	37.313	ENSSLDG00000019660	znf341	50	35.294
ENSSLDG00000018493	-	78	65.517	ENSSLDG00000009582	-	98	65.517
ENSSLDG00000018493	-	84	43.796	ENSSLDG00000004005	-	96	43.796
ENSSLDG00000018493	-	96	52.778	ENSSLDG00000012320	-	97	55.914
ENSSLDG00000018493	-	81	40.698	ENSSLDG00000012821	znf236	66	42.105
ENSSLDG00000018493	-	96	34.186	ENSSLDG00000005839	-	87	34.186
ENSSLDG00000018493	-	90	34.627	ENSSLDG00000021177	zbtb41	50	34.627
ENSSLDG00000018493	-	86	46.591	ENSSLDG00000006994	-	94	46.591
ENSSLDG00000018493	-	84	51.402	ENSSLDG00000009821	-	93	51.402
ENSSLDG00000018493	-	78	42.857	ENSSLDG00000004485	-	66	42.544
ENSSLDG00000018493	-	83	46.857	ENSSLDG00000006724	-	93	46.857
ENSSLDG00000018493	-	89	47.682	ENSSLDG00000021278	-	59	44.681
ENSSLDG00000018493	-	79	39.394	ENSSLDG00000017166	scrt1b	51	39.394
ENSSLDG00000018493	-	97	59.836	ENSSLDG00000018273	-	92	59.836
ENSSLDG00000018493	-	83	40.122	ENSSLDG00000000376	-	77	40.122
ENSSLDG00000018493	-	86	39.552	ENSSLDG00000012852	snai2	67	39.286
ENSSLDG00000018493	-	96	47.651	ENSSLDG00000021127	-	66	47.651
ENSSLDG00000018493	-	86	40.000	ENSSLDG00000016301	-	91	40.000
ENSSLDG00000018493	-	80	45.548	ENSSLDG00000006288	-	93	44.444
ENSSLDG00000018493	-	82	62.338	ENSSLDG00000005868	-	98	62.338
ENSSLDG00000018493	-	86	40.952	ENSSLDG00000002956	zbtb16a	55	40.952
ENSSLDG00000018493	-	97	68.085	ENSSLDG00000020675	-	99	68.085
ENSSLDG00000018493	-	79	34.194	ENSSLDG00000003269	znf710b	50	34.194
ENSSLDG00000018493	-	80	45.570	ENSSLDG00000002756	-	76	42.857
ENSSLDG00000018493	-	80	44.590	ENSSLDG00000000859	-	98	45.570
ENSSLDG00000018493	-	92	63.265	ENSSLDG00000012036	-	94	63.265
ENSSLDG00000018493	-	77	37.168	ENSSLDG00000025359	-	54	37.168
ENSSLDG00000018493	-	91	42.771	ENSSLDG00000011849	-	61	42.771
ENSSLDG00000018493	-	79	32.432	ENSSLDG00000012415	si:dkey-89b17.4	54	33.591
ENSSLDG00000018493	-	96	50.000	ENSSLDG00000007524	-	93	49.333
ENSSLDG00000018493	-	76	46.667	ENSSLDG00000014465	-	83	46.667
ENSSLDG00000018493	-	96	63.983	ENSSLDG00000018598	-	96	62.651
ENSSLDG00000018493	-	82	35.040	ENSSLDG00000014166	znf319b	80	36.471
ENSSLDG00000018493	-	82	51.515	ENSSLDG00000020455	-	84	51.515
ENSSLDG00000018493	-	82	38.247	ENSSLDG00000005670	-	91	37.634
ENSSLDG00000018493	-	97	51.471	ENSSLDG00000005999	-	73	51.471
ENSSLDG00000018493	-	86	32.484	ENSSLDG00000000464	-	64	32.484
ENSSLDG00000018493	-	84	54.688	ENSSLDG00000020727	-	98	54.688
ENSSLDG00000018493	-	82	37.386	ENSSLDG00000024295	ZNF319	87	37.386
ENSSLDG00000018493	-	78	52.482	ENSSLDG00000018033	-	58	52.482
ENSSLDG00000018493	-	86	62.338	ENSSLDG00000006217	-	100	62.338
ENSSLDG00000018493	-	82	47.253	ENSSLDG00000014177	zbtb47b	69	47.253
ENSSLDG00000018493	-	79	41.964	ENSSLDG00000017614	-	96	41.964
ENSSLDG00000018493	-	78	53.398	ENSSLDG00000000432	-	93	53.398
ENSSLDG00000018493	-	86	38.378	ENSSLDG00000014436	-	77	38.378
ENSSLDG00000018493	-	86	31.078	ENSSLDG00000004428	PRDM15	52	31.653
ENSSLDG00000018493	-	97	56.395	ENSSLDG00000013760	-	98	56.725
ENSSLDG00000018493	-	80	44.898	ENSSLDG00000017718	zbtb48	55	44.898
ENSSLDG00000018493	-	78	54.321	ENSSLDG00000000202	-	77	54.321
ENSSLDG00000018493	-	81	49.123	ENSSLDG00000009061	-	93	40.465
ENSSLDG00000018493	-	96	45.366	ENSSLDG00000001850	-	80	45.366
ENSSLDG00000018493	-	96	61.633	ENSSLDG00000017937	-	98	62.460
ENSSLDG00000018493	-	85	36.011	ENSSLDG00000025265	znf526	65	35.714
ENSSLDG00000018493	-	82	70.632	ENSSLDG00000010390	-	84	70.632
ENSSLDG00000018493	-	89	41.776	ENSSLDG00000023661	-	95	42.633
ENSSLDG00000018493	-	79	63.514	ENSSLDG00000015049	-	94	63.514
ENSSLDG00000018493	-	96	57.246	ENSSLDG00000008645	-	99	55.495
ENSSLDG00000018493	-	81	45.570	ENSSLDG00000023060	-	70	45.570
ENSSLDG00000018493	-	80	39.167	ENSSLDG00000018521	znf646	98	39.167
ENSSLDG00000018493	-	90	68.579	ENSSLDG00000016317	-	95	68.579
ENSSLDG00000018493	-	83	41.667	ENSSLDG00000002515	-	82	41.667
ENSSLDG00000018493	-	96	58.952	ENSSLDG00000012133	-	98	54.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018493	-	86	50.153	ENSECAG00000009130	-	99	50.153	Equus_caballus
ENSSLDG00000018493	-	85	52.893	ENSOARG00000016159	-	98	52.893	Ovis_aries
ENSSLDG00000018493	-	96	55.042	ENSSPAG00000000384	-	99	59.091	Stegastes_partitus