EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000018799 (Gene tree)
Gene ID: -
Gene Symbol: zgc:152968
Alias: -
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 7317 bases
Position: chrPEQF01099051.1:1911762-1919078
Accession: 111663078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000024133	RNase_T	PF00929.24	3.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000024900	-	3150	XM_023417130	ENSSLDP00000024133	1049 (aa)	XP_023272898	-

Gene Model

Click here to download ENSSLDG00000018799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018799's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018799	zgc:152968	75	79.319	ENSAPOG00000005095	zgc:152968	89	79.319	Acanthochromis_polyacanthus
ENSSLDG00000018799	zgc:152968	86	83.538	ENSACIG00000002527	zgc:152968	92	83.538	Amphilophus_citrinellus
ENSSLDG00000018799	zgc:152968	97	59.626	ENSAOCG00000018049	-	94	59.358	Amphiprion_ocellaris
ENSSLDG00000018799	zgc:152968	96	77.974	ENSAPEG00000012559	zgc:152968	93	77.974	Amphiprion_percula
ENSSLDG00000018799	zgc:152968	97	81.796	ENSACLG00000020524	-	93	80.562	Astatotilapia_calliptera
ENSSLDG00000018799	zgc:152968	86	80.402	ENSCVAG00000015400	zgc:152968	93	80.402	Cyprinodon_variegatus
ENSSLDG00000018799	zgc:152968	71	52.133	ENSDARG00000037002	zgc:152968	64	52.512	Danio_rerio
ENSSLDG00000018799	zgc:152968	97	65.639	ENSELUG00000014272	zgc:152968	91	65.639	Esox_lucius
ENSSLDG00000018799	zgc:152968	94	78.589	ENSFHEG00000003641	-	93	72.616	Fundulus_heteroclitus
ENSSLDG00000018799	zgc:152968	87	88.073	ENSGAFG00000016810	-	85	78.973	Gambusia_affinis
ENSSLDG00000018799	zgc:152968	94	81.675	ENSHBUG00000007524	-	85	81.675	Haplochromis_burtoni
ENSSLDG00000018799	zgc:152968	73	65.764	ENSIPUG00000004633	zgc:152968	84	65.764	Ictalurus_punctatus
ENSSLDG00000018799	zgc:152968	97	56.214	ENSLBEG00000026485	zgc:152968	99	56.011	Labrus_bergylta
ENSSLDG00000018799	zgc:152968	90	74.492	ENSMAMG00000005920	-	95	55.088	Mastacembelus_armatus
ENSSLDG00000018799	zgc:152968	97	81.553	ENSMZEG00005013783	-	93	79.669	Maylandia_zebra
ENSSLDG00000018799	zgc:152968	96	62.012	ENSMMOG00000018072	zgc:152968	88	84.119	Mola_mola
ENSSLDG00000018799	zgc:152968	97	62.679	ENSMALG00000003536	-	98	63.062	Monopterus_albus
ENSSLDG00000018799	zgc:152968	97	81.951	ENSONIG00000016897	-	87	81.951	Oreochromis_niloticus
ENSSLDG00000018799	zgc:152968	76	75.060	ENSORLG00020012504	-	76	75.060	Oryzias_latipes_hni
ENSSLDG00000018799	zgc:152968	71	68.421	ENSOMEG00000008840	-	77	68.885	Oryzias_melastigma
ENSSLDG00000018799	zgc:152968	95	79.707	ENSPFOG00000006104	-	85	79.707	Poecilia_formosa
ENSSLDG00000018799	zgc:152968	95	79.707	ENSPLAG00000005034	-	93	80.494	Poecilia_latipinna
ENSSLDG00000018799	zgc:152968	95	80.196	ENSPMEG00000018012	-	85	80.196	Poecilia_mexicana
ENSSLDG00000018799	zgc:152968	98	48.496	ENSPREG00000007481	-	87	58.043	Poecilia_reticulata
ENSSLDG00000018799	zgc:152968	53	51.901	ENSSFOG00015023869	zgc:152968	56	95.833	Scleropages_formosus
ENSSLDG00000018799	zgc:152968	97	85.366	ENSSMAG00000008149	-	88	85.158	Scophthalmus_maximus
ENSSLDG00000018799	zgc:152968	98	95.914	ENSSDUG00000022323	-	99	95.914	Seriola_dumerili
ENSSLDG00000018799	zgc:152968	98	57.689	ENSSPAG00000007632	-	99	57.409	Stegastes_partitus
ENSSLDG00000018799	zgc:152968	97	78.537	ENSTRUG00000025441	zgc:152968	88	78.537	Takifugu_rubripes
ENSSLDG00000018799	zgc:152968	95	78.986	ENSXMAG00000026483	-	60	78.986	Xiphophorus_maculatus