EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000018908 (Gene tree)
Gene ID: -
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 5609 bases
Position: chrPEQF01098182.1:73688-79296
Accession: 111651599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000024264	B3_4	PF03483.17	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025035	-	2233	XM_023401590	ENSSLDP00000024264	559 (aa)	XP_023257358	UPI000C6FB586

Gene Model

Click here to download ENSSLDG00000018908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018908's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018908	lrrc47	99	53.646	ENSG00000130764	LRRC47	99	53.541	Homo_sapiens
ENSSLDG00000018908	lrrc47	100	86.583	ENSAPOG00000019553	lrrc47	100	86.583	Acanthochromis_polyacanthus
ENSSLDG00000018908	lrrc47	76	57.763	ENSAMEG00000009152	LRRC47	94	57.339	Ailuropoda_melanoleuca
ENSSLDG00000018908	lrrc47	67	62.141	ENSAPLG00000003167	LRRC47	99	61.273	Anas_platyrhynchos
ENSSLDG00000018908	lrrc47	65	61.853	ENSACAG00000008267	LRRC47	97	61.853	Anolis_carolinensis
ENSSLDG00000018908	lrrc47	99	53.299	ENSANAG00000025576	LRRC47	99	53.436	Aotus_nancymaae
ENSSLDG00000018908	lrrc47	99	53.391	ENSBTAG00000004738	LRRC47	98	53.380	Bos_taurus
ENSSLDG00000018908	lrrc47	99	54.261	ENSCAFG00000019492	LRRC47	97	54.435	Canis_familiaris
ENSSLDG00000018908	lrrc47	99	54.450	ENSCAFG00020009667	LRRC47	99	54.625	Canis_lupus_dingo
ENSSLDG00000018908	lrrc47	99	54.101	ENSCHIG00000022607	LRRC47	98	54.087	Capra_hircus
ENSSLDG00000018908	lrrc47	96	52.793	ENSTSYG00000009326	LRRC47	97	53.427	Carlito_syrichta
ENSSLDG00000018908	lrrc47	66	59.574	ENSCAPG00000016517	LRRC47	97	60.598	Cavia_aperea
ENSSLDG00000018908	lrrc47	99	53.391	ENSCPOG00000014931	LRRC47	95	53.391	Cavia_porcellus
ENSSLDG00000018908	lrrc47	99	52.696	ENSCCAG00000024895	LRRC47	99	52.677	Cebus_capucinus
ENSSLDG00000018908	lrrc47	99	53.993	ENSCATG00000029337	LRRC47	99	54.374	Cercocebus_atys
ENSSLDG00000018908	lrrc47	97	54.885	ENSCLAG00000006093	LRRC47	97	54.885	Chinchilla_lanigera
ENSSLDG00000018908	lrrc47	99	54.340	ENSCSAG00000000727	LRRC47	99	54.889	Chlorocebus_sabaeus
ENSSLDG00000018908	lrrc47	99	51.672	ENSCPBG00000019404	LRRC47	98	52.277	Chrysemys_picta_bellii
ENSSLDG00000018908	lrrc47	79	55.991	ENSCANG00000030701	LRRC47	96	56.344	Colobus_angolensis_palliatus
ENSSLDG00000018908	lrrc47	99	54.007	ENSCGRG00001015159	Lrrc47	88	54.610	Cricetulus_griseus_chok1gshd
ENSSLDG00000018908	lrrc47	66	59.631	ENSCGRG00000017336	Lrrc47	97	60.929	Cricetulus_griseus_crigri
ENSSLDG00000018908	lrrc47	100	80.501	ENSCSEG00000006217	lrrc47	96	80.501	Cynoglossus_semilaevis
ENSSLDG00000018908	lrrc47	66	59.947	ENSDORG00000016594	Lrrc47	97	61.685	Dipodomys_ordii
ENSSLDG00000018908	lrrc47	97	55.752	ENSEASG00005021788	LRRC47	97	55.830	Equus_asinus_asinus
ENSSLDG00000018908	lrrc47	97	55.575	ENSECAG00000022472	LRRC47	88	55.263	Equus_caballus
ENSSLDG00000018908	lrrc47	100	71.958	ENSELUG00000017544	lrrc47	98	72.840	Esox_lucius
ENSSLDG00000018908	lrrc47	94	52.564	ENSFCAG00000011632	LRRC47	96	52.930	Felis_catus
ENSSLDG00000018908	lrrc47	70	60.957	ENSFALG00000009631	LRRC47	98	57.303	Ficedula_albicollis
ENSSLDG00000018908	lrrc47	100	68.917	ENSGMOG00000015674	lrrc47	99	70.160	Gadus_morhua
ENSSLDG00000018908	lrrc47	99	51.053	ENSGALG00000050995	LRRC47	99	51.228	Gallus_gallus
ENSSLDG00000018908	lrrc47	100	78.750	ENSGACG00000005550	lrrc47	99	78.571	Gasterosteus_aculeatus
ENSSLDG00000018908	lrrc47	99	51.010	ENSGAGG00000022584	LRRC47	98	52.462	Gopherus_agassizii
ENSSLDG00000018908	lrrc47	99	53.819	ENSGGOG00000015571	LRRC47	99	53.713	Gorilla_gorilla
ENSSLDG00000018908	lrrc47	99	53.043	ENSHGLG00000018278	LRRC47	95	53.391	Heterocephalus_glaber_female
ENSSLDG00000018908	lrrc47	70	59.305	ENSHGLG00100008507	LRRC47	99	59.305	Heterocephalus_glaber_male
ENSSLDG00000018908	lrrc47	100	77.996	ENSHCOG00000006348	lrrc47	98	78.712	Hippocampus_comes
ENSSLDG00000018908	lrrc47	99	54.167	ENSSTOG00000027559	LRRC47	99	54.498	Ictidomys_tridecemlineatus
ENSSLDG00000018908	lrrc47	99	54.783	ENSJJAG00000017474	Lrrc47	96	54.783	Jaculus_jaculus
ENSSLDG00000018908	lrrc47	100	84.079	ENSKMAG00000003414	lrrc47	100	84.079	Kryptolebias_marmoratus
ENSSLDG00000018908	lrrc47	99	54.261	ENSLAFG00000011657	LRRC47	98	55.208	Loxodonta_africana
ENSSLDG00000018908	lrrc47	99	42.660	ENSMFAG00000045730	LRRC47	88	55.230	Macaca_fascicularis
ENSSLDG00000018908	lrrc47	99	53.162	ENSMNEG00000042488	LRRC47	98	53.886	Macaca_nemestrina
ENSSLDG00000018908	lrrc47	77	55.804	ENSMLEG00000043735	LRRC47	90	56.250	Mandrillus_leucophaeus
ENSSLDG00000018908	lrrc47	97	55.516	ENSMAUG00000021337	Lrrc47	96	55.338	Mesocricetus_auratus
ENSSLDG00000018908	lrrc47	99	52.870	ENSMICG00000026816	LRRC47	99	54.059	Microcebus_murinus
ENSSLDG00000018908	lrrc47	99	54.850	ENSMOCG00000021279	Lrrc47	97	55.476	Microtus_ochrogaster
ENSSLDG00000018908	lrrc47	100	82.826	ENSMMOG00000017007	lrrc47	100	82.826	Mola_mola
ENSSLDG00000018908	lrrc47	99	43.633	ENSMODG00000006554	LRRC47	98	52.870	Monodelphis_domestica
ENSSLDG00000018908	lrrc47	97	54.787	MGP_CAROLIEiJ_G0026864	Lrrc47	97	54.787	Mus_caroli
ENSSLDG00000018908	lrrc47	97	55.142	ENSMUSG00000029028	Lrrc47	97	55.142	Mus_musculus
ENSSLDG00000018908	lrrc47	97	54.610	MGP_PahariEiJ_G0029212	Lrrc47	97	54.401	Mus_pahari
ENSSLDG00000018908	lrrc47	97	54.965	MGP_SPRETEiJ_G0027857	Lrrc47	96	54.965	Mus_spretus
ENSSLDG00000018908	lrrc47	66	58.730	ENSMPUG00000007321	LRRC47	75	58.995	Mustela_putorius_furo
ENSSLDG00000018908	lrrc47	99	53.240	ENSNGAG00000022153	Lrrc47	98	53.927	Nannospalax_galili
ENSSLDG00000018908	lrrc47	99	52.787	ENSNLEG00000008131	LRRC47	99	52.931	Nomascus_leucogenys
ENSSLDG00000018908	lrrc47	84	54.508	ENSODEG00000010882	LRRC47	93	54.508	Octodon_degus
ENSSLDG00000018908	lrrc47	97	82.222	ENSORLG00000002532	lrrc47	100	82.222	Oryzias_latipes
ENSSLDG00000018908	lrrc47	100	81.395	ENSORLG00020019601	lrrc47	100	81.395	Oryzias_latipes_hni
ENSSLDG00000018908	lrrc47	100	81.216	ENSORLG00015014040	lrrc47	100	81.216	Oryzias_latipes_hsok
ENSSLDG00000018908	lrrc47	100	81.216	ENSOMEG00000008989	lrrc47	100	81.216	Oryzias_melastigma
ENSSLDG00000018908	lrrc47	99	53.368	ENSOGAG00000001553	LRRC47	99	53.541	Otolemur_garnettii
ENSSLDG00000018908	lrrc47	99	51.478	ENSOARG00000015290	LRRC47	98	51.473	Ovis_aries
ENSSLDG00000018908	lrrc47	76	57.110	ENSPPAG00000036370	-	98	56.948	Pan_paniscus
ENSSLDG00000018908	lrrc47	99	52.696	ENSPPRG00000005261	LRRC47	98	53.043	Panthera_pardus
ENSSLDG00000018908	lrrc47	99	53.646	ENSPTRG00000000068	LRRC47	99	53.541	Pan_troglodytes
ENSSLDG00000018908	lrrc47	99	53.993	ENSPANG00000012437	LRRC47	99	54.545	Papio_anubis
ENSSLDG00000018908	lrrc47	66	62.599	ENSPSIG00000004196	LRRC47	97	63.710	Pelodiscus_sinensis
ENSSLDG00000018908	lrrc47	64	61.644	ENSPEMG00000021068	Lrrc47	97	61.475	Peromyscus_maniculatus_bairdii
ENSSLDG00000018908	lrrc47	99	56.195	ENSPCIG00000003638	LRRC47	98	56.348	Phascolarctos_cinereus
ENSSLDG00000018908	lrrc47	94	81.250	ENSPFOG00000000992	lrrc47	94	80.303	Poecilia_formosa
ENSSLDG00000018908	lrrc47	100	80.859	ENSPLAG00000008077	lrrc47	100	79.964	Poecilia_latipinna
ENSSLDG00000018908	lrrc47	100	80.680	ENSPMEG00000007367	lrrc47	100	79.785	Poecilia_mexicana
ENSSLDG00000018908	lrrc47	99	53.646	ENSPPYG00000001960	LRRC47	99	53.541	Pongo_abelii
ENSSLDG00000018908	lrrc47	99	53.217	ENSPCOG00000019161	LRRC47	98	54.152	Propithecus_coquereli
ENSSLDG00000018908	lrrc47	99	53.846	ENSPVAG00000009839	LRRC47	99	54.101	Pteropus_vampyrus
ENSSLDG00000018908	lrrc47	99	64.654	ENSPNAG00000017982	lrrc47	99	66.252	Pygocentrus_nattereri
ENSSLDG00000018908	lrrc47	97	54.787	ENSRNOG00000024796	Lrrc47	97	54.787	Rattus_norvegicus
ENSSLDG00000018908	lrrc47	99	54.167	ENSRBIG00000019437	LRRC47	99	54.545	Rhinopithecus_bieti
ENSSLDG00000018908	lrrc47	99	54.167	ENSRROG00000043182	LRRC47	99	54.545	Rhinopithecus_roxellana
ENSSLDG00000018908	lrrc47	79	56.071	ENSSBOG00000026334	LRRC47	92	56.512	Saimiri_boliviensis_boliviensis
ENSSLDG00000018908	lrrc47	99	48.671	ENSSHAG00000007360	LRRC47	98	50.345	Sarcophilus_harrisii
ENSSLDG00000018908	lrrc47	100	88.571	ENSSMAG00000009344	lrrc47	100	88.571	Scophthalmus_maximus
ENSSLDG00000018908	lrrc47	100	99.106	ENSSDUG00000014618	lrrc47	100	99.106	Seriola_dumerili
ENSSLDG00000018908	lrrc47	99	52.840	ENSSPUG00000010277	LRRC47	98	53.333	Sphenodon_punctatus
ENSSLDG00000018908	lrrc47	100	86.941	ENSSPAG00000005188	lrrc47	100	86.941	Stegastes_partitus
ENSSLDG00000018908	lrrc47	99	53.913	ENSSSCG00000039516	LRRC47	98	53.713	Sus_scrofa
ENSSLDG00000018908	lrrc47	72	60.149	ENSTGUG00000002737	LRRC47	96	61.266	Taeniopygia_guttata
ENSSLDG00000018908	lrrc47	100	79.606	ENSTRUG00000017696	lrrc47	100	79.606	Takifugu_rubripes
ENSSLDG00000018908	lrrc47	100	77.996	ENSTNIG00000010923	lrrc47	99	77.996	Tetraodon_nigroviridis
ENSSLDG00000018908	lrrc47	99	52.778	ENSTTRG00000011751	LRRC47	99	52.951	Tursiops_truncatus
ENSSLDG00000018908	lrrc47	89	54.143	ENSUAMG00000012080	LRRC47	98	54.111	Ursus_americanus
ENSSLDG00000018908	lrrc47	66	59.259	ENSUMAG00000010781	LRRC47	80	59.162	Ursus_maritimus
ENSSLDG00000018908	lrrc47	99	50.347	ENSVVUG00000027118	LRRC47	98	50.521	Vulpes_vulpes
ENSSLDG00000018908	lrrc47	97	58.514	ENSXETG00000006029	lrrc47	97	59.132	Xenopus_tropicalis
ENSSLDG00000018908	lrrc47	99	79.749	ENSXCOG00000002813	lrrc47	99	78.853	Xiphophorus_couchianus
ENSSLDG00000018908	lrrc47	99	80.576	ENSXMAG00000019386	lrrc47	100	79.496	Xiphophorus_maculatus