EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000018917 (Gene tree)
Gene ID: -
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 19208 bases
Position: chrPEQF01099431.1:2072734-2091941
Accession: 111645607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000024267	RRM_1	PF00076.22	4.8e-30	1	2
ENSSLDP00000024267	RRM_1	PF00076.22	4.8e-30	2	2
ENSSLDP00000024278	RRM_1	PF00076.22	5.4e-30	1	2
ENSSLDP00000024278	RRM_1	PF00076.22	5.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025039	-	2051	XM_023394861	ENSSLDP00000024267	615 (aa)	XP_023250629	UPI000C6FC227
ENSSLDT00000025049	-	6981	XM_023394860	ENSSLDP00000024278	643 (aa)	XP_023250628	UPI000C6FC2B9

Gene Model

Click here to download ENSSLDG00000018917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000018917	sfpq	63	59.184	ENSSLDG00000012392	nono	92	55.765
ENSSLDG00000018917	sfpq	64	52.315	ENSSLDG00000004284	pspc1	85	50.998

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018917	sfpq	65	78.291	ENSG00000116560	SFPQ	97	70.833	Homo_sapiens
ENSSLDG00000018917	sfpq	73	85.867	ENSAPOG00000024257	sfpq	100	79.365	Acanthochromis_polyacanthus
ENSSLDG00000018917	sfpq	65	78.291	ENSAMEG00000000815	SFPQ	98	76.389	Ailuropoda_melanoleuca
ENSSLDG00000018917	sfpq	100	79.109	ENSACIG00000000905	sfpq	100	78.615	Amphilophus_citrinellus
ENSSLDG00000018917	sfpq	74	85.053	ENSAOCG00000002889	sfpq	100	76.446	Amphiprion_ocellaris
ENSSLDG00000018917	sfpq	74	85.053	ENSAPEG00000016556	sfpq	100	76.446	Amphiprion_percula
ENSSLDG00000018917	sfpq	100	85.605	ENSATEG00000002981	sfpq	100	86.595	Anabas_testudineus
ENSSLDG00000018917	sfpq	61	69.853	ENSANAG00000027438	-	61	66.271	Aotus_nancymaae
ENSSLDG00000018917	sfpq	52	59.143	ENSANAG00000037798	-	99	56.734	Aotus_nancymaae
ENSSLDG00000018917	sfpq	52	56.056	ENSANAG00000021268	-	100	51.558	Aotus_nancymaae
ENSSLDG00000018917	sfpq	100	79.381	ENSACLG00000022332	sfpq	100	78.645	Astatotilapia_calliptera
ENSSLDG00000018917	sfpq	69	79.510	ENSAMXG00000011538	sfpq	94	64.780	Astyanax_mexicanus
ENSSLDG00000018917	sfpq	65	78.291	ENSBTAG00000016328	SFPQ	98	56.440	Bos_taurus
ENSSLDG00000018917	sfpq	65	73.380	ENSCAFG00000017608	-	77	63.148	Canis_familiaris
ENSSLDG00000018917	sfpq	66	74.545	ENSCAFG00000018271	-	77	66.082	Canis_familiaris
ENSSLDG00000018917	sfpq	65	78.291	ENSCAFG00000003595	-	84	63.509	Canis_familiaris
ENSSLDG00000018917	sfpq	52	70.000	ENSCAFG00020010702	-	100	70.286	Canis_lupus_dingo
ENSSLDG00000018917	sfpq	66	74.545	ENSCAFG00020004881	-	82	62.909	Canis_lupus_dingo
ENSSLDG00000018917	sfpq	65	78.291	ENSCHIG00000023097	SFPQ	97	54.462	Capra_hircus
ENSSLDG00000018917	sfpq	52	66.379	ENSTSYG00000035106	-	98	63.401	Carlito_syrichta
ENSSLDG00000018917	sfpq	52	76.705	ENSTSYG00000037120	-	100	74.359	Carlito_syrichta
ENSSLDG00000018917	sfpq	52	68.661	ENSCPOG00000015018	-	100	64.641	Cavia_porcellus
ENSSLDG00000018917	sfpq	65	52.955	ENSCATG00000032664	-	78	41.880	Cercocebus_atys
ENSSLDG00000018917	sfpq	58	81.285	ENSCATG00000036179	-	67	65.801	Cercocebus_atys
ENSSLDG00000018917	sfpq	52	76.705	ENSCLAG00000009583	-	100	74.359	Chinchilla_lanigera
ENSSLDG00000018917	sfpq	65	78.291	ENSCSAG00000001082	SFPQ	79	63.700	Chlorocebus_sabaeus
ENSSLDG00000018917	sfpq	57	76.378	ENSCHOG00000009131	SFPQ	100	74.211	Choloepus_hoffmanni
ENSSLDG00000018917	sfpq	66	76.351	ENSCPBG00000018674	SFPQ	76	68.155	Chrysemys_picta_bellii
ENSSLDG00000018917	sfpq	52	76.705	ENSCANG00000028087	-	100	74.359	Colobus_angolensis_palliatus
ENSSLDG00000018917	sfpq	65	78.291	ENSCGRG00001011698	Sfpq	61	76.620	Cricetulus_griseus_chok1gshd
ENSSLDG00000018917	sfpq	64	78.140	ENSCGRG00000010128	Sfpq	95	76.566	Cricetulus_griseus_crigri
ENSSLDG00000018917	sfpq	100	70.882	ENSCSEG00000007852	sfpq	100	70.338	Cynoglossus_semilaevis
ENSSLDG00000018917	sfpq	100	69.192	ENSCVAG00000019538	sfpq	94	76.000	Cyprinodon_variegatus
ENSSLDG00000018917	sfpq	95	64.490	ENSDARG00000011564	sfpq	100	87.826	Danio_rerio
ENSSLDG00000018917	sfpq	65	78.291	ENSDNOG00000049454	SFPQ	74	67.433	Dasypus_novemcinctus
ENSSLDG00000018917	sfpq	65	78.291	ENSDORG00000008109	Sfpq	87	59.360	Dipodomys_ordii
ENSSLDG00000018917	sfpq	65	71.759	ENSETEG00000001095	SFPQ	61	65.055	Echinops_telfairi
ENSSLDG00000018917	sfpq	65	78.291	ENSEASG00005012012	SFPQ	74	67.433	Equus_asinus_asinus
ENSSLDG00000018917	sfpq	65	78.291	ENSECAG00000000642	SFPQ	74	67.433	Equus_caballus
ENSSLDG00000018917	sfpq	69	81.250	ENSELUG00000023145	sfpq	96	67.778	Esox_lucius
ENSSLDG00000018917	sfpq	65	78.291	ENSFCAG00000042862	SFPQ	98	56.642	Felis_catus
ENSSLDG00000018917	sfpq	52	75.568	ENSFALG00000000731	SFPQ	100	74.074	Ficedula_albicollis
ENSSLDG00000018917	sfpq	52	67.705	ENSFDAG00000017723	-	100	65.909	Fukomys_damarensis
ENSSLDG00000018917	sfpq	76	72.070	ENSFHEG00000015200	sfpq	94	74.000	Fundulus_heteroclitus
ENSSLDG00000018917	sfpq	95	70.440	ENSGMOG00000011957	sfpq	99	70.183	Gadus_morhua
ENSSLDG00000018917	sfpq	84	88.278	ENSGMOG00000011950	SFPQ	99	69.538	Gadus_morhua
ENSSLDG00000018917	sfpq	66	76.244	ENSGALG00000002514	SFPQ	80	68.522	Gallus_gallus
ENSSLDG00000018917	sfpq	99	68.013	ENSGAFG00000014571	sfpq	100	66.111	Gambusia_affinis
ENSSLDG00000018917	sfpq	100	80.183	ENSGACG00000002034	sfpq	100	80.154	Gasterosteus_aculeatus
ENSSLDG00000018917	sfpq	65	78.241	ENSGGOG00000026354	SFPQ	100	74.359	Gorilla_gorilla
ENSSLDG00000018917	sfpq	100	79.381	ENSHBUG00000016818	sfpq	100	78.645	Haplochromis_burtoni
ENSSLDG00000018917	sfpq	52	76.705	ENSHGLG00100004136	-	100	74.359	Heterocephalus_glaber_male
ENSSLDG00000018917	sfpq	100	80.328	ENSHCOG00000008612	sfpq	94	81.148	Hippocampus_comes
ENSSLDG00000018917	sfpq	67	78.733	ENSIPUG00000013076	SFPQ	79	75.914	Ictalurus_punctatus
ENSSLDG00000018917	sfpq	52	76.705	ENSSTOG00000014004	-	100	74.359	Ictidomys_tridecemlineatus
ENSSLDG00000018917	sfpq	65	78.291	ENSJJAG00000015633	Sfpq	61	76.389	Jaculus_jaculus
ENSSLDG00000018917	sfpq	100	77.980	ENSKMAG00000000238	sfpq	90	77.980	Kryptolebias_marmoratus
ENSSLDG00000018917	sfpq	100	72.150	ENSLBEG00000003163	sfpq	98	73.429	Labrus_bergylta
ENSSLDG00000018917	sfpq	68	74.172	ENSLACG00000014728	SFPQ	84	68.593	Latimeria_chalumnae
ENSSLDG00000018917	sfpq	91	65.961	ENSLOCG00000001067	sfpq	94	65.705	Lepisosteus_oculatus
ENSSLDG00000018917	sfpq	65	78.060	ENSLAFG00000015951	SFPQ	86	63.830	Loxodonta_africana
ENSSLDG00000018917	sfpq	65	78.291	ENSMFAG00000000797	SFPQ	79	63.700	Macaca_fascicularis
ENSSLDG00000018917	sfpq	65	78.291	ENSMNEG00000038895	SFPQ	79	63.700	Macaca_nemestrina
ENSSLDG00000018917	sfpq	52	73.864	ENSMLEG00000010643	-	100	71.510	Mandrillus_leucophaeus
ENSSLDG00000018917	sfpq	100	87.827	ENSMAMG00000007875	sfpq	100	87.519	Mastacembelus_armatus
ENSSLDG00000018917	sfpq	100	80.179	ENSMZEG00005026091	sfpq	100	79.434	Maylandia_zebra
ENSSLDG00000018917	sfpq	53	79.762	ENSMGAG00000004237	SFPQ	100	71.355	Meleagris_gallopavo
ENSSLDG00000018917	sfpq	65	78.291	ENSMAUG00000006402	Sfpq	61	76.620	Mesocricetus_auratus
ENSSLDG00000018917	sfpq	65	78.291	ENSMICG00000027265	SFPQ	61	76.389	Microcebus_murinus
ENSSLDG00000018917	sfpq	65	75.520	ENSMOCG00000019075	Sfpq	89	73.843	Microtus_ochrogaster
ENSSLDG00000018917	sfpq	100	82.181	ENSMMOG00000001074	sfpq	100	81.385	Mola_mola
ENSSLDG00000018917	sfpq	65	78.009	ENSMODG00000017937	SFPQ	64	76.566	Monodelphis_domestica
ENSSLDG00000018917	sfpq	100	82.615	ENSMALG00000010381	sfpq	100	82.462	Monopterus_albus
ENSSLDG00000018917	sfpq	65	78.291	MGP_CAROLIEiJ_G0026487	Sfpq	62	76.620	Mus_caroli
ENSSLDG00000018917	sfpq	65	78.291	ENSMUSG00000028820	Sfpq	62	76.620	Mus_musculus
ENSSLDG00000018917	sfpq	65	78.291	MGP_PahariEiJ_G0028818	Sfpq	92	58.696	Mus_pahari
ENSSLDG00000018917	sfpq	65	78.291	MGP_SPRETEiJ_G0027466	Sfpq	62	76.620	Mus_spretus
ENSSLDG00000018917	sfpq	65	77.880	ENSMLUG00000027090	SFPQ	97	75.982	Myotis_lucifugus
ENSSLDG00000018917	sfpq	100	79.732	ENSNBRG00000017479	sfpq	100	79.583	Neolamprologus_brichardi
ENSSLDG00000018917	sfpq	52	76.705	ENSNLEG00000035521	-	100	74.359	Nomascus_leucogenys
ENSSLDG00000018917	sfpq	65	78.422	ENSMEUG00000014082	SFPQ	62	76.977	Notamacropus_eugenii
ENSSLDG00000018917	sfpq	66	77.500	ENSOPRG00000013696	SFPQ	62	75.626	Ochotona_princeps
ENSSLDG00000018917	sfpq	62	69.430	ENSODEG00000005485	SFPQ	76	66.826	Octodon_degus
ENSSLDG00000018917	sfpq	100	79.377	ENSONIG00000017737	sfpq	100	78.947	Oreochromis_niloticus
ENSSLDG00000018917	sfpq	52	76.638	ENSOANG00000008789	-	100	74.286	Ornithorhynchus_anatinus
ENSSLDG00000018917	sfpq	65	78.291	ENSOCUG00000001877	SFPQ	85	76.389	Oryctolagus_cuniculus
ENSSLDG00000018917	sfpq	100	67.813	ENSORLG00000007459	sfpq	100	68.975	Oryzias_latipes
ENSSLDG00000018917	sfpq	100	68.313	ENSORLG00020011818	sfpq	100	68.450	Oryzias_latipes_hni
ENSSLDG00000018917	sfpq	100	66.576	ENSORLG00015002131	sfpq	99	78.125	Oryzias_latipes_hsok
ENSSLDG00000018917	sfpq	100	65.499	ENSOMEG00000018020	sfpq	100	76.834	Oryzias_melastigma
ENSSLDG00000018917	sfpq	65	78.522	ENSOGAG00000027710	SFPQ	82	76.157	Otolemur_garnettii
ENSSLDG00000018917	sfpq	65	78.060	ENSOARG00000019439	SFPQ	66	75.000	Ovis_aries
ENSSLDG00000018917	sfpq	65	78.291	ENSPPAG00000030078	SFPQ	61	76.389	Pan_paniscus
ENSSLDG00000018917	sfpq	52	76.487	ENSPPRG00000015478	-	100	74.148	Panthera_pardus
ENSSLDG00000018917	sfpq	52	76.705	ENSPTIG00000007710	-	100	74.359	Panthera_tigris_altaica
ENSSLDG00000018917	sfpq	65	72.517	ENSPTRG00000000518	SFPQ	78	59.337	Pan_troglodytes
ENSSLDG00000018917	sfpq	65	78.291	ENSPANG00000005380	SFPQ	64	76.389	Papio_anubis
ENSSLDG00000018917	sfpq	95	66.290	ENSPKIG00000023035	sfpq	96	66.453	Paramormyrops_kingsleyae
ENSSLDG00000018917	sfpq	65	78.241	ENSPSIG00000011494	SFPQ	100	75.174	Pelodiscus_sinensis
ENSSLDG00000018917	sfpq	100	65.868	ENSPMGG00000023883	sfpq	100	66.564	Periophthalmus_magnuspinnatus
ENSSLDG00000018917	sfpq	65	78.291	ENSPEMG00000009794	Sfpq	89	76.620	Peromyscus_maniculatus_bairdii
ENSSLDG00000018917	sfpq	65	78.241	ENSPCIG00000000923	SFPQ	62	76.798	Phascolarctos_cinereus
ENSSLDG00000018917	sfpq	100	68.350	ENSPFOG00000003127	sfpq	94	75.319	Poecilia_formosa
ENSSLDG00000018917	sfpq	100	65.097	ENSPREG00000008060	sfpq	98	74.167	Poecilia_reticulata
ENSSLDG00000018917	sfpq	65	78.291	ENSPPYG00000001560	SFPQ	79	63.700	Pongo_abelii
ENSSLDG00000018917	sfpq	64	77.907	ENSPCAG00000006164	SFPQ	60	75.991	Procavia_capensis
ENSSLDG00000018917	sfpq	65	78.291	ENSPCOG00000027127	SFPQ	79	63.222	Propithecus_coquereli
ENSSLDG00000018917	sfpq	100	78.457	ENSPNYG00000007494	sfpq	100	77.584	Pundamilia_nyererei
ENSSLDG00000018917	sfpq	65	83.135	ENSPNAG00000002128	sfpq	95	65.183	Pygocentrus_nattereri
ENSSLDG00000018917	sfpq	65	78.291	ENSRNOG00000058461	Sfpq	62	76.620	Rattus_norvegicus
ENSSLDG00000018917	sfpq	64	72.558	ENSRBIG00000035286	SFPQ	100	74.359	Rhinopithecus_bieti
ENSSLDG00000018917	sfpq	65	78.291	ENSRROG00000040992	SFPQ	100	74.359	Rhinopithecus_roxellana
ENSSLDG00000018917	sfpq	52	76.705	ENSSBOG00000024972	-	100	74.359	Saimiri_boliviensis_boliviensis
ENSSLDG00000018917	sfpq	51	57.018	ENSSBOG00000033925	-	99	53.061	Saimiri_boliviensis_boliviensis
ENSSLDG00000018917	sfpq	52	74.571	ENSSHAG00000012312	-	100	71.347	Sarcophilus_harrisii
ENSSLDG00000018917	sfpq	63	78.841	ENSSHAG00000016107	-	99	70.806	Sarcophilus_harrisii
ENSSLDG00000018917	sfpq	83	72.778	ENSSFOG00015009289	sfpq	96	73.585	Scleropages_formosus
ENSSLDG00000018917	sfpq	100	82.371	ENSSMAG00000018201	sfpq	100	81.543	Scophthalmus_maximus
ENSSLDG00000018917	sfpq	100	99.378	ENSSDUG00000008402	sfpq	100	99.378	Seriola_dumerili
ENSSLDG00000018917	sfpq	55	77.778	ENSSARG00000006409	SFPQ	100	75.543	Sorex_araneus
ENSSLDG00000018917	sfpq	100	81.129	ENSSPAG00000016550	sfpq	100	84.547	Stegastes_partitus
ENSSLDG00000018917	sfpq	65	77.315	ENSTGUG00000001722	SFPQ	100	74.942	Taeniopygia_guttata
ENSSLDG00000018917	sfpq	100	76.696	ENSTRUG00000003783	sfpq	100	76.696	Takifugu_rubripes
ENSSLDG00000018917	sfpq	86	78.609	ENSTNIG00000011331	sfpq	99	77.205	Tetraodon_nigroviridis
ENSSLDG00000018917	sfpq	65	75.463	ENSTTRG00000013930	SFPQ	86	59.900	Tursiops_truncatus
ENSSLDG00000018917	sfpq	52	74.432	ENSUMAG00000008056	-	100	72.080	Ursus_maritimus
ENSSLDG00000018917	sfpq	52	69.714	ENSVVUG00000000874	-	100	67.335	Vulpes_vulpes
ENSSLDG00000018917	sfpq	65	75.123	ENSXETG00000009682	sfpq	100	78.882	Xenopus_tropicalis
ENSSLDG00000018917	sfpq	100	66.570	ENSXMAG00000016391	sfpq	100	75.745	Xiphophorus_maculatus