EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000018985 (Gene tree)
Gene ID: -
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 5726 bases
Position: chrPEQF01099201.1:360756-366481
Accession: ZDB-GENE-030131-9687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000024370	RTC	PF01137.21	3.5e-86	1	1
ENSSLDP00000024370	RTC_insert	PF05189.13	3.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025144	-	1107	-	ENSSLDP00000024370	368 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000018985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000018985's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000018985	rtca	95	71.795	ENSG00000137996	RTCA	96	71.795	Homo_sapiens
ENSSLDG00000018985	rtca	95	92.550	ENSAPOG00000001345	rtca	95	92.550	Acanthochromis_polyacanthus
ENSSLDG00000018985	rtca	73	72.862	ENSAMEG00000008855	RTCA	100	72.862	Ailuropoda_melanoleuca
ENSSLDG00000018985	rtca	95	91.691	ENSACIG00000019643	rtca	96	91.691	Amphilophus_citrinellus
ENSSLDG00000018985	rtca	95	92.837	ENSAOCG00000014979	rtca	95	92.837	Amphiprion_ocellaris
ENSSLDG00000018985	rtca	95	92.550	ENSAPEG00000006945	rtca	95	92.550	Amphiprion_percula
ENSSLDG00000018985	rtca	96	93.785	ENSATEG00000006315	rtca	98	93.785	Anabas_testudineus
ENSSLDG00000018985	rtca	95	67.139	ENSAPLG00000015430	RTCA	100	67.139	Anas_platyrhynchos
ENSSLDG00000018985	rtca	95	71.795	ENSANAG00000025446	RTCA	96	71.795	Aotus_nancymaae
ENSSLDG00000018985	rtca	95	91.404	ENSACLG00000020770	rtca	95	91.404	Astatotilapia_calliptera
ENSSLDG00000018985	rtca	95	81.662	ENSAMXG00000043271	rtca	96	81.662	Astyanax_mexicanus
ENSSLDG00000018985	rtca	95	72.365	ENSBTAG00000006321	RTCA	96	72.365	Bos_taurus
ENSSLDG00000018985	rtca	95	72.080	ENSCJAG00000003398	RTCA	96	72.080	Callithrix_jacchus
ENSSLDG00000018985	rtca	95	72.080	ENSCAFG00000020010	RTCA	65	72.080	Canis_familiaris
ENSSLDG00000018985	rtca	95	72.080	ENSCAFG00020011528	RTCA	55	72.080	Canis_lupus_dingo
ENSSLDG00000018985	rtca	99	70.300	ENSCHIG00000018937	RTCA	98	70.300	Capra_hircus
ENSSLDG00000018985	rtca	95	71.510	ENSTSYG00000011305	RTCA	96	71.510	Carlito_syrichta
ENSSLDG00000018985	rtca	95	71.795	ENSCCAG00000021844	RTCA	95	73.270	Cebus_capucinus
ENSSLDG00000018985	rtca	95	69.505	ENSCATG00000019364	RTCA	100	71.521	Cercocebus_atys
ENSSLDG00000018985	rtca	86	72.468	ENSCLAG00000006125	RTCA	100	72.468	Chinchilla_lanigera
ENSSLDG00000018985	rtca	95	71.795	ENSCSAG00000001509	RTCA	96	71.795	Chlorocebus_sabaeus
ENSSLDG00000018985	rtca	95	70.655	ENSCHOG00000005211	RTCA	96	70.655	Choloepus_hoffmanni
ENSSLDG00000018985	rtca	95	68.000	ENSCPBG00000026658	RTCA	96	68.000	Chrysemys_picta_bellii
ENSSLDG00000018985	rtca	95	56.000	ENSCING00000007875	-	96	56.000	Ciona_intestinalis
ENSSLDG00000018985	rtca	94	55.908	ENSCSAVG00000007269	-	95	55.908	Ciona_savignyi
ENSSLDG00000018985	rtca	95	71.510	ENSCANG00000040106	RTCA	96	71.510	Colobus_angolensis_palliatus
ENSSLDG00000018985	rtca	73	70.632	ENSCGRG00001013163	Rtca	85	70.632	Cricetulus_griseus_chok1gshd
ENSSLDG00000018985	rtca	95	86.246	ENSCSEG00000000530	rtca	94	86.246	Cynoglossus_semilaevis
ENSSLDG00000018985	rtca	95	72.650	ENSCVAG00000021809	rtca	96	72.650	Cyprinodon_variegatus
ENSSLDG00000018985	rtca	95	81.662	ENSDARG00000002215	rtca	96	81.662	Danio_rerio
ENSSLDG00000018985	rtca	95	72.443	ENSDNOG00000000456	RTCA	96	72.365	Dasypus_novemcinctus
ENSSLDG00000018985	rtca	95	71.225	ENSDORG00000005448	Rtca	96	71.225	Dipodomys_ordii
ENSSLDG00000018985	rtca	94	38.329	FBgn0025630	Rtca	95	38.329	Drosophila_melanogaster
ENSSLDG00000018985	rtca	90	52.994	ENSEBUG00000008556	rtca	92	52.994	Eptatretus_burgeri
ENSSLDG00000018985	rtca	95	72.080	ENSEASG00005015926	RTCA	96	72.080	Equus_asinus_asinus
ENSSLDG00000018985	rtca	95	72.080	ENSECAG00000019831	RTCA	96	72.080	Equus_caballus
ENSSLDG00000018985	rtca	86	64.955	ENSEEUG00000001165	RTCA	96	64.955	Erinaceus_europaeus
ENSSLDG00000018985	rtca	97	77.222	ENSELUG00000003741	rtca	99	77.222	Esox_lucius
ENSSLDG00000018985	rtca	95	72.365	ENSFCAG00000024460	RTCA	96	72.365	Felis_catus
ENSSLDG00000018985	rtca	88	68.923	ENSFALG00000002443	RTCA	87	68.923	Ficedula_albicollis
ENSSLDG00000018985	rtca	95	71.510	ENSFDAG00000012070	-	96	71.510	Fukomys_damarensis
ENSSLDG00000018985	rtca	93	59.366	ENSFDAG00000016084	-	95	59.366	Fukomys_damarensis
ENSSLDG00000018985	rtca	70	77.821	ENSFHEG00000002868	rtca	97	83.628	Fundulus_heteroclitus
ENSSLDG00000018985	rtca	95	81.375	ENSGMOG00000013264	rtca	96	81.375	Gadus_morhua
ENSSLDG00000018985	rtca	95	68.286	ENSGALG00000005277	RTCA	96	68.286	Gallus_gallus
ENSSLDG00000018985	rtca	95	91.404	ENSGAFG00000011853	rtca	95	91.404	Gambusia_affinis
ENSSLDG00000018985	rtca	98	87.569	ENSGACG00000013497	rtca	99	87.569	Gasterosteus_aculeatus
ENSSLDG00000018985	rtca	76	68.459	ENSGAGG00000023306	RTCA	95	68.705	Gopherus_agassizii
ENSSLDG00000018985	rtca	95	70.655	ENSGGOG00000044018	-	96	70.655	Gorilla_gorilla
ENSSLDG00000018985	rtca	95	71.225	ENSGGOG00000009546	-	100	70.550	Gorilla_gorilla
ENSSLDG00000018985	rtca	95	91.117	ENSHBUG00000002114	rtca	95	91.117	Haplochromis_burtoni
ENSSLDG00000018985	rtca	95	71.510	ENSHGLG00000002617	RTCA	96	71.510	Heterocephalus_glaber_female
ENSSLDG00000018985	rtca	95	71.510	ENSHGLG00100006056	RTCA	96	71.510	Heterocephalus_glaber_male
ENSSLDG00000018985	rtca	95	77.077	ENSHCOG00000020628	rtca	86	77.077	Hippocampus_comes
ENSSLDG00000018985	rtca	95	80.229	ENSIPUG00000024803	rtca	96	80.229	Ictalurus_punctatus
ENSSLDG00000018985	rtca	96	61.798	ENSSTOG00000033099	-	97	61.798	Ictidomys_tridecemlineatus
ENSSLDG00000018985	rtca	86	72.013	ENSSTOG00000013528	-	93	72.013	Ictidomys_tridecemlineatus
ENSSLDG00000018985	rtca	95	51.143	ENSJJAG00000016178	Rtca	95	51.143	Jaculus_jaculus
ENSSLDG00000018985	rtca	95	90.544	ENSKMAG00000006651	rtca	95	90.544	Kryptolebias_marmoratus
ENSSLDG00000018985	rtca	87	89.655	ENSLBEG00000002448	-	99	89.655	Labrus_bergylta
ENSSLDG00000018985	rtca	95	91.117	ENSLBEG00000028971	rtca	96	91.117	Labrus_bergylta
ENSSLDG00000018985	rtca	95	68.571	ENSLACG00000013666	RTCA	96	68.571	Latimeria_chalumnae
ENSSLDG00000018985	rtca	98	75.549	ENSLOCG00000000093	rtca	99	75.549	Lepisosteus_oculatus
ENSSLDG00000018985	rtca	95	70.655	ENSLAFG00000001473	RTCA	96	70.655	Loxodonta_africana
ENSSLDG00000018985	rtca	95	71.795	ENSMFAG00000034132	RTCA	96	71.795	Macaca_fascicularis
ENSSLDG00000018985	rtca	95	71.795	ENSMMUG00000019105	RTCA	96	71.795	Macaca_mulatta
ENSSLDG00000018985	rtca	83	71.197	ENSMNEG00000037163	RTCA	100	71.197	Macaca_nemestrina
ENSSLDG00000018985	rtca	95	58.689	ENSMLEG00000042151	RTCA	95	58.689	Mandrillus_leucophaeus
ENSSLDG00000018985	rtca	95	95.129	ENSMAMG00000016536	rtca	96	95.129	Mastacembelus_armatus
ENSSLDG00000018985	rtca	95	91.404	ENSMZEG00005017945	rtca	95	91.404	Maylandia_zebra
ENSSLDG00000018985	rtca	86	68.553	ENSMGAG00000006892	RTCA	99	68.553	Meleagris_gallopavo
ENSSLDG00000018985	rtca	95	70.940	ENSMAUG00000008488	Rtca	96	70.940	Mesocricetus_auratus
ENSSLDG00000018985	rtca	83	71.521	ENSMICG00000008643	RTCA	100	71.521	Microcebus_murinus
ENSSLDG00000018985	rtca	95	70.370	ENSMOCG00000016660	Rtca	96	70.370	Microtus_ochrogaster
ENSSLDG00000018985	rtca	83	90.879	ENSMMOG00000007750	rtca	100	90.879	Mola_mola
ENSSLDG00000018985	rtca	94	72.126	ENSMODG00000003557	RTCA	95	72.126	Monodelphis_domestica
ENSSLDG00000018985	rtca	95	93.123	ENSMALG00000020844	rtca	96	93.123	Monopterus_albus
ENSSLDG00000018985	rtca	95	69.516	MGP_CAROLIEiJ_G0025565	Rtca	100	69.014	Mus_caroli
ENSSLDG00000018985	rtca	95	69.231	ENSMUSG00000000339	Rtca	100	69.014	Mus_musculus
ENSSLDG00000018985	rtca	95	69.516	MGP_PahariEiJ_G0027011	Rtca	100	69.014	Mus_pahari
ENSSLDG00000018985	rtca	95	69.801	MGP_SPRETEiJ_G0026515	Rtca	100	69.718	Mus_spretus
ENSSLDG00000018985	rtca	95	72.365	ENSMPUG00000012119	RTCA	96	72.365	Mustela_putorius_furo
ENSSLDG00000018985	rtca	95	69.034	ENSMLUG00000009922	RTCA	96	69.034	Myotis_lucifugus
ENSSLDG00000018985	rtca	95	69.801	ENSNGAG00000011540	Rtca	96	69.801	Nannospalax_galili
ENSSLDG00000018985	rtca	95	91.117	ENSNBRG00000003062	rtca	95	91.117	Neolamprologus_brichardi
ENSSLDG00000018985	rtca	95	71.510	ENSNLEG00000031426	RTCA	96	71.510	Nomascus_leucogenys
ENSSLDG00000018985	rtca	73	67.658	ENSOPRG00000012092	RTCA	71	67.658	Ochotona_princeps
ENSSLDG00000018985	rtca	94	71.264	ENSODEG00000006990	RTCA	98	71.268	Octodon_degus
ENSSLDG00000018985	rtca	95	91.404	ENSONIG00000007753	rtca	95	91.404	Oreochromis_niloticus
ENSSLDG00000018985	rtca	86	71.609	ENSOANG00000012055	RTCA	98	71.609	Ornithorhynchus_anatinus
ENSSLDG00000018985	rtca	95	71.795	ENSOCUG00000014247	RTCA	96	71.795	Oryctolagus_cuniculus
ENSSLDG00000018985	rtca	95	91.404	ENSORLG00000013605	rtca	96	91.404	Oryzias_latipes
ENSSLDG00000018985	rtca	95	91.691	ENSORLG00020001904	rtca	96	91.691	Oryzias_latipes_hni
ENSSLDG00000018985	rtca	95	91.691	ENSORLG00015021064	rtca	96	91.691	Oryzias_latipes_hsok
ENSSLDG00000018985	rtca	95	90.258	ENSOMEG00000000756	rtca	96	90.258	Oryzias_melastigma
ENSSLDG00000018985	rtca	95	65.812	ENSOGAG00000005627	RTCA	96	65.812	Otolemur_garnettii
ENSSLDG00000018985	rtca	86	71.698	ENSOARG00000018122	RTCA	100	71.698	Ovis_aries
ENSSLDG00000018985	rtca	95	68.407	ENSPPAG00000035119	RTCA	100	70.227	Pan_paniscus
ENSSLDG00000018985	rtca	95	72.650	ENSPPRG00000000350	RTCA	96	72.650	Panthera_pardus
ENSSLDG00000018985	rtca	95	72.080	ENSPTIG00000012816	RTCA	96	72.080	Panthera_tigris_altaica
ENSSLDG00000018985	rtca	95	68.407	ENSPTRG00000001004	RTCA	100	70.227	Pan_troglodytes
ENSSLDG00000018985	rtca	95	71.510	ENSPANG00000000346	RTCA	96	71.510	Papio_anubis
ENSSLDG00000018985	rtca	95	83.381	ENSPKIG00000001653	rtca	96	83.381	Paramormyrops_kingsleyae
ENSSLDG00000018985	rtca	95	67.714	ENSPSIG00000011408	RTCA	96	67.714	Pelodiscus_sinensis
ENSSLDG00000018985	rtca	95	70.370	ENSPEMG00000018582	Rtca	96	70.370	Peromyscus_maniculatus_bairdii
ENSSLDG00000018985	rtca	95	56.410	ENSPMAG00000009110	rtca	96	56.410	Petromyzon_marinus
ENSSLDG00000018985	rtca	95	71.795	ENSPCIG00000007684	RTCA	96	71.795	Phascolarctos_cinereus
ENSSLDG00000018985	rtca	95	91.714	ENSPFOG00000004824	rtca	96	91.714	Poecilia_formosa
ENSSLDG00000018985	rtca	95	91.977	ENSPLAG00000011753	rtca	95	91.977	Poecilia_latipinna
ENSSLDG00000018985	rtca	95	91.977	ENSPMEG00000020469	rtca	95	91.977	Poecilia_mexicana
ENSSLDG00000018985	rtca	95	91.404	ENSPREG00000001365	rtca	95	91.404	Poecilia_reticulata
ENSSLDG00000018985	rtca	95	71.795	ENSPPYG00000001115	RTCA	96	71.795	Pongo_abelii
ENSSLDG00000018985	rtca	95	68.661	ENSPCAG00000005076	RTCA	96	68.661	Procavia_capensis
ENSSLDG00000018985	rtca	95	72.365	ENSPCOG00000005603	RTCA	96	72.365	Propithecus_coquereli
ENSSLDG00000018985	rtca	95	67.582	ENSPVAG00000009478	RTCA	96	67.582	Pteropus_vampyrus
ENSSLDG00000018985	rtca	95	91.404	ENSPNYG00000004722	rtca	95	91.404	Pundamilia_nyererei
ENSSLDG00000018985	rtca	95	82.808	ENSPNAG00000022270	rtca	96	82.808	Pygocentrus_nattereri
ENSSLDG00000018985	rtca	95	69.231	ENSRNOG00000014575	Rtca	96	69.231	Rattus_norvegicus
ENSSLDG00000018985	rtca	95	68.681	ENSRBIG00000041180	RTCA	100	70.550	Rhinopithecus_bieti
ENSSLDG00000018985	rtca	95	71.225	ENSRROG00000024929	RTCA	96	71.225	Rhinopithecus_roxellana
ENSSLDG00000018985	rtca	95	71.510	ENSSBOG00000028626	RTCA	96	71.510	Saimiri_boliviensis_boliviensis
ENSSLDG00000018985	rtca	95	71.225	ENSSHAG00000001758	RTCA	96	71.225	Sarcophilus_harrisii
ENSSLDG00000018985	rtca	95	88.252	ENSSMAG00000014680	rtca	94	88.252	Scophthalmus_maximus
ENSSLDG00000018985	rtca	95	99.140	ENSSDUG00000015585	rtca	94	99.140	Seriola_dumerili
ENSSLDG00000018985	rtca	86	66.877	ENSSARG00000013993	RTCA	100	66.877	Sorex_araneus
ENSSLDG00000018985	rtca	95	93.123	ENSSPAG00000011938	rtca	95	93.123	Stegastes_partitus
ENSSLDG00000018985	rtca	95	72.080	ENSSSCG00000006865	RTCA	96	72.080	Sus_scrofa
ENSSLDG00000018985	rtca	95	68.857	ENSTGUG00000005154	RTCA	96	68.857	Taeniopygia_guttata
ENSSLDG00000018985	rtca	95	91.404	ENSTRUG00000008799	rtca	96	91.404	Takifugu_rubripes
ENSSLDG00000018985	rtca	95	87.966	ENSTNIG00000004725	rtca	96	87.966	Tetraodon_nigroviridis
ENSSLDG00000018985	rtca	54	57.895	ENSTBEG00000000943	RTCA	57	57.895	Tupaia_belangeri
ENSSLDG00000018985	rtca	95	69.231	ENSTTRG00000015327	RTCA	96	69.231	Tursiops_truncatus
ENSSLDG00000018985	rtca	89	71.646	ENSUAMG00000017265	RTCA	92	71.646	Ursus_americanus
ENSSLDG00000018985	rtca	95	72.080	ENSUMAG00000007881	RTCA	96	72.080	Ursus_maritimus
ENSSLDG00000018985	rtca	86	63.407	ENSVPAG00000001039	RTCA	84	63.407	Vicugna_pacos
ENSSLDG00000018985	rtca	95	72.080	ENSVVUG00000022041	RTCA	65	72.080	Vulpes_vulpes
ENSSLDG00000018985	rtca	95	58.640	ENSXETG00000031661	RTCA	99	57.020	Xenopus_tropicalis
ENSSLDG00000018985	rtca	95	79.370	ENSXCOG00000008002	rtca	96	79.370	Xiphophorus_couchianus
ENSSLDG00000018985	rtca	95	91.691	ENSXMAG00000005482	rtca	95	91.691	Xiphophorus_maculatus