EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000019031 (Gene tree)
Gene ID: -
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 8625 bases
Position: chrPEQF01099343.1:2880570-2889194
Accession: 111670929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000024417	R3H	PF01424.22	1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025189	-	4687	XM_023427882	ENSSLDP00000024417	430 (aa)	XP_023283650	UPI000C6F8A28

Gene Model

Click here to download ENSSLDG00000019031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019031's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019031	r3hcc1	97	32.037	ENSG00000104679	R3HCC1	98	42.857	Homo_sapiens
ENSSLDG00000019031	r3hcc1	98	64.133	ENSAPOG00000003616	r3hcc1	93	64.371	Acanthochromis_polyacanthus
ENSSLDG00000019031	r3hcc1	97	34.014	ENSAMEG00000002963	R3HCC1	64	46.853	Ailuropoda_melanoleuca
ENSSLDG00000019031	r3hcc1	99	63.858	ENSACIG00000017144	r3hcc1	100	63.858	Amphilophus_citrinellus
ENSSLDG00000019031	r3hcc1	97	70.644	ENSAOCG00000003945	r3hcc1	100	68.974	Amphiprion_ocellaris
ENSSLDG00000019031	r3hcc1	97	68.258	ENSAPEG00000003613	r3hcc1	100	68.258	Amphiprion_percula
ENSSLDG00000019031	r3hcc1	91	77.863	ENSATEG00000023860	r3hcc1	100	77.506	Anabas_testudineus
ENSSLDG00000019031	r3hcc1	98	35.857	ENSACAG00000016627	R3HCC1	96	35.730	Anolis_carolinensis
ENSSLDG00000019031	r3hcc1	97	33.259	ENSANAG00000036169	R3HCC1	90	30.995	Aotus_nancymaae
ENSSLDG00000019031	r3hcc1	97	33.043	ENSBTAG00000025830	R3HCC1	93	32.244	Bos_taurus
ENSSLDG00000019031	r3hcc1	97	32.000	ENSCHIG00000009107	R3HCC1	96	32.599	Capra_hircus
ENSSLDG00000019031	r3hcc1	97	32.517	ENSTSYG00000000511	R3HCC1	75	31.849	Carlito_syrichta
ENSSLDG00000019031	r3hcc1	97	32.059	ENSCPOG00000009696	R3HCC1	65	45.775	Cavia_porcellus
ENSSLDG00000019031	r3hcc1	97	30.870	ENSCCAG00000037811	R3HCC1	89	32.143	Cebus_capucinus
ENSSLDG00000019031	r3hcc1	55	51.807	ENSCATG00000032971	R3HCC1	85	33.333	Cercocebus_atys
ENSSLDG00000019031	r3hcc1	97	36.530	ENSCLAG00000015556	R3HCC1	81	36.073	Chinchilla_lanigera
ENSSLDG00000019031	r3hcc1	73	45.578	ENSCHOG00000000396	R3HCC1	93	33.621	Choloepus_hoffmanni
ENSSLDG00000019031	r3hcc1	98	32.159	ENSCANG00000029441	R3HCC1	89	32.743	Colobus_angolensis_palliatus
ENSSLDG00000019031	r3hcc1	97	67.221	ENSCSEG00000005748	r3hcc1	99	66.983	Cynoglossus_semilaevis
ENSSLDG00000019031	r3hcc1	84	55.163	ENSCVAG00000002640	r3hcc1	96	53.825	Cyprinodon_variegatus
ENSSLDG00000019031	r3hcc1	98	43.560	ENSDARG00000099593	r3hcc1	99	42.791	Danio_rerio
ENSSLDG00000019031	r3hcc1	97	31.223	ENSDNOG00000007168	R3HCC1	60	46.154	Dasypus_novemcinctus
ENSSLDG00000019031	r3hcc1	97	33.480	ENSEEUG00000011918	R3HCC1	93	33.407	Erinaceus_europaeus
ENSSLDG00000019031	r3hcc1	95	48.585	ENSELUG00000023650	r3hcc1	98	51.463	Esox_lucius
ENSSLDG00000019031	r3hcc1	97	32.751	ENSFCAG00000012395	R3HCC1	65	46.154	Felis_catus
ENSSLDG00000019031	r3hcc1	70	36.424	ENSFALG00000001646	R3HCC1	51	37.063	Ficedula_albicollis
ENSSLDG00000019031	r3hcc1	82	48.023	ENSGMOG00000017590	-	96	48.171	Gadus_morhua
ENSSLDG00000019031	r3hcc1	99	66.512	ENSGAFG00000008747	-	93	64.631	Gambusia_affinis
ENSSLDG00000019031	r3hcc1	98	68.322	ENSGACG00000008447	r3hcc1	96	66.667	Gasterosteus_aculeatus
ENSSLDG00000019031	r3hcc1	97	33.410	ENSGGOG00000013817	R3HCC1	56	51.807	Gorilla_gorilla
ENSSLDG00000019031	r3hcc1	76	71.861	ENSHBUG00000022250	-	100	71.861	Haplochromis_burtoni
ENSSLDG00000019031	r3hcc1	97	33.638	ENSHGLG00000010517	R3HCC1	89	33.638	Heterocephalus_glaber_female
ENSSLDG00000019031	r3hcc1	97	33.638	ENSHGLG00100006388	R3HCC1	89	33.638	Heterocephalus_glaber_male
ENSSLDG00000019031	r3hcc1	98	56.643	ENSHCOG00000011745	r3hcc1	94	57.611	Hippocampus_comes
ENSSLDG00000019031	r3hcc1	99	50.472	ENSIPUG00000024504	r3hcc1	87	50.943	Ictalurus_punctatus
ENSSLDG00000019031	r3hcc1	72	46.980	ENSSTOG00000027130	R3HCC1	63	49.618	Ictidomys_tridecemlineatus
ENSSLDG00000019031	r3hcc1	94	66.420	ENSKMAG00000000286	r3hcc1	100	64.951	Kryptolebias_marmoratus
ENSSLDG00000019031	r3hcc1	98	38.137	ENSLACG00000011894	R3HCC1	68	50.340	Latimeria_chalumnae
ENSSLDG00000019031	r3hcc1	98	47.465	ENSLOCG00000015442	r3hcc1	99	46.062	Lepisosteus_oculatus
ENSSLDG00000019031	r3hcc1	76	42.771	ENSLAFG00000016137	R3HCC1	58	48.062	Loxodonta_africana
ENSSLDG00000019031	r3hcc1	97	32.962	ENSMFAG00000032894	R3HCC1	86	33.111	Macaca_fascicularis
ENSSLDG00000019031	r3hcc1	97	33.333	ENSMMUG00000016655	R3HCC1	87	33.333	Macaca_mulatta
ENSSLDG00000019031	r3hcc1	97	34.000	ENSMNEG00000043283	R3HCC1	81	34.642	Macaca_nemestrina
ENSSLDG00000019031	r3hcc1	55	51.807	ENSMLEG00000030147	R3HCC1	89	32.962	Mandrillus_leucophaeus
ENSSLDG00000019031	r3hcc1	94	77.284	ENSMAMG00000018146	r3hcc1	100	77.284	Mastacembelus_armatus
ENSSLDG00000019031	r3hcc1	65	46.099	ENSMAUG00000016096	R3hcc1	61	46.154	Mesocricetus_auratus
ENSSLDG00000019031	r3hcc1	72	44.966	ENSMICG00000011146	R3HCC1	65	46.154	Microcebus_murinus
ENSSLDG00000019031	r3hcc1	67	45.205	ENSMOCG00000018508	R3hcc1	60	46.154	Microtus_ochrogaster
ENSSLDG00000019031	r3hcc1	94	72.346	ENSMALG00000000731	r3hcc1	100	72.346	Monopterus_albus
ENSSLDG00000019031	r3hcc1	72	45.205	MGP_CAROLIEiJ_G0019467	R3hcc1	59	46.154	Mus_caroli
ENSSLDG00000019031	r3hcc1	73	44.966	ENSMUSG00000034194	R3hcc1	63	46.154	Mus_musculus
ENSSLDG00000019031	r3hcc1	73	44.966	MGP_PahariEiJ_G0030484	R3hcc1	62	46.154	Mus_pahari
ENSSLDG00000019031	r3hcc1	73	44.966	MGP_SPRETEiJ_G0020359	R3hcc1	63	46.154	Mus_spretus
ENSSLDG00000019031	r3hcc1	97	33.551	ENSMLUG00000000266	R3HCC1	89	32.762	Myotis_lucifugus
ENSSLDG00000019031	r3hcc1	90	92.857	ENSNBRG00000016975	-	84	77.143	Neolamprologus_brichardi
ENSSLDG00000019031	r3hcc1	99	33.562	ENSMEUG00000010587	R3HCC1	97	34.240	Notamacropus_eugenii
ENSSLDG00000019031	r3hcc1	98	33.110	ENSOCUG00000023554	R3HCC1	83	33.185	Oryctolagus_cuniculus
ENSSLDG00000019031	r3hcc1	94	54.433	ENSORLG00000016816	r3hcc1	100	53.941	Oryzias_latipes
ENSSLDG00000019031	r3hcc1	94	54.680	ENSORLG00020012005	r3hcc1	100	53.941	Oryzias_latipes_hni
ENSSLDG00000019031	r3hcc1	94	54.680	ENSORLG00015007018	r3hcc1	100	53.941	Oryzias_latipes_hsok
ENSSLDG00000019031	r3hcc1	94	55.172	ENSOMEG00000000816	r3hcc1	100	53.941	Oryzias_melastigma
ENSSLDG00000019031	r3hcc1	97	33.042	ENSOGAG00000001291	R3HCC1	60	46.154	Otolemur_garnettii
ENSSLDG00000019031	r3hcc1	97	31.929	ENSOARG00000010146	R3HCC1	94	33.479	Ovis_aries
ENSSLDG00000019031	r3hcc1	97	32.037	ENSPPAG00000033165	R3HCC1	59	45.802	Pan_paniscus
ENSSLDG00000019031	r3hcc1	97	32.385	ENSPPRG00000002522	R3HCC1	57	51.807	Panthera_pardus
ENSSLDG00000019031	r3hcc1	97	31.808	ENSPTRG00000020076	R3HCC1	59	45.802	Pan_troglodytes
ENSSLDG00000019031	r3hcc1	55	51.807	ENSPANG00000000453	R3HCC1	89	33.333	Papio_anubis
ENSSLDG00000019031	r3hcc1	90	48.849	ENSPKIG00000014426	-	95	46.447	Paramormyrops_kingsleyae
ENSSLDG00000019031	r3hcc1	90	49.377	ENSPKIG00000020397	-	95	47.870	Paramormyrops_kingsleyae
ENSSLDG00000019031	r3hcc1	97	36.530	ENSPSIG00000017664	R3HCC1	96	36.406	Pelodiscus_sinensis
ENSSLDG00000019031	r3hcc1	53	62.651	ENSPMGG00000007792	r3hcc1	63	56.849	Periophthalmus_magnuspinnatus
ENSSLDG00000019031	r3hcc1	90	31.841	ENSPCIG00000022718	-	83	31.719	Phascolarctos_cinereus
ENSSLDG00000019031	r3hcc1	99	65.888	ENSPFOG00000022301	r3hcc1	92	64.720	Poecilia_formosa
ENSSLDG00000019031	r3hcc1	99	66.121	ENSPLAG00000010794	r3hcc1	92	64.953	Poecilia_latipinna
ENSSLDG00000019031	r3hcc1	99	65.888	ENSPMEG00000022515	r3hcc1	92	64.720	Poecilia_mexicana
ENSSLDG00000019031	r3hcc1	99	65.421	ENSPREG00000000713	r3hcc1	92	64.486	Poecilia_reticulata
ENSSLDG00000019031	r3hcc1	89	31.553	ENSPPYG00000018436	R3HCC1	59	45.802	Pongo_abelii
ENSSLDG00000019031	r3hcc1	69	46.512	ENSPCAG00000012229	R3HCC1	61	46.512	Procavia_capensis
ENSSLDG00000019031	r3hcc1	97	33.557	ENSPCOG00000027554	R3HCC1	69	45.455	Propithecus_coquereli
ENSSLDG00000019031	r3hcc1	99	34.056	ENSPVAG00000009829	R3HCC1	94	32.120	Pteropus_vampyrus
ENSSLDG00000019031	r3hcc1	95	48.529	ENSPNAG00000023875	r3hcc1	99	48.418	Pygocentrus_nattereri
ENSSLDG00000019031	r3hcc1	69	44.654	ENSRNOG00000016777	AABR07018321.1	53	41.618	Rattus_norvegicus
ENSSLDG00000019031	r3hcc1	97	32.373	ENSRBIG00000028045	R3HCC1	96	32.667	Rhinopithecus_bieti
ENSSLDG00000019031	r3hcc1	98	32.671	ENSRROG00000031126	R3HCC1	85	32.743	Rhinopithecus_roxellana
ENSSLDG00000019031	r3hcc1	97	31.767	ENSSBOG00000022590	R3HCC1	96	31.767	Saimiri_boliviensis_boliviensis
ENSSLDG00000019031	r3hcc1	93	48.642	ENSSFOG00015013507	r3hcc1	100	47.654	Scleropages_formosus
ENSSLDG00000019031	r3hcc1	94	81.235	ENSSMAG00000008647	r3hcc1	100	81.235	Scophthalmus_maximus
ENSSLDG00000019031	r3hcc1	100	98.372	ENSSDUG00000022786	r3hcc1	100	98.372	Seriola_dumerili
ENSSLDG00000019031	r3hcc1	97	70.883	ENSSPAG00000013497	r3hcc1	100	69.212	Stegastes_partitus
ENSSLDG00000019031	r3hcc1	64	43.939	ENSSSCG00000037347	-	56	43.182	Sus_scrofa
ENSSLDG00000019031	r3hcc1	71	45.890	ENSSSCG00000039915	-	65	46.853	Sus_scrofa
ENSSLDG00000019031	r3hcc1	97	54.545	ENSTRUG00000015880	r3hcc1	99	54.067	Takifugu_rubripes
ENSSLDG00000019031	r3hcc1	97	32.886	ENSVVUG00000005056	R3HCC1	90	32.889	Vulpes_vulpes
ENSSLDG00000019031	r3hcc1	96	59.367	ENSXCOG00000017626	r3hcc1	90	59.367	Xiphophorus_couchianus
ENSSLDG00000019031	r3hcc1	99	66.355	ENSXMAG00000018375	r3hcc1	92	66.355	Xiphophorus_maculatus