EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000019060 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 7931 bases
Position: chrPEQF01099201.1:374836-382766
Accession: 111668190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000024447	TRM13	PF05206.14	1.7e-81	1	1
ENSSLDP00000024447	zf-U11-48K	PF05253.12	1.3e-08	1	1
ENSSLDP00000024447	zf-TRM13_CCCH	PF11722.8	9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025224	-	5298	XM_023424176	ENSSLDP00000024447	483 (aa)	XP_023279944	UPI000C6FA359

Gene Model

Click here to download ENSSLDG00000019060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019060	trmt13	98	50.308	ENSG00000122435	TRMT13	99	55.046	Homo_sapiens
ENSSLDG00000019060	trmt13	96	74.542	ENSAPOG00000015131	trmt13	99	75.153	Acanthochromis_polyacanthus
ENSSLDG00000019060	trmt13	96	51.153	ENSAMEG00000008917	TRMT13	95	51.153	Ailuropoda_melanoleuca
ENSSLDG00000019060	trmt13	98	75.262	ENSACIG00000005804	trmt13	95	75.262	Amphilophus_citrinellus
ENSSLDG00000019060	trmt13	96	73.790	ENSAOCG00000023585	trmt13	99	73.790	Amphiprion_ocellaris
ENSSLDG00000019060	trmt13	96	73.790	ENSAPEG00000004025	trmt13	99	73.790	Amphiprion_percula
ENSSLDG00000019060	trmt13	97	76.231	ENSATEG00000006597	trmt13	97	76.231	Anabas_testudineus
ENSSLDG00000019060	trmt13	87	51.606	ENSAPLG00000014924	TRMT13	98	51.606	Anas_platyrhynchos
ENSSLDG00000019060	trmt13	96	52.321	ENSACAG00000003498	TRMT13	97	52.321	Anolis_carolinensis
ENSSLDG00000019060	trmt13	98	50.513	ENSANAG00000019525	TRMT13	98	55.556	Aotus_nancymaae
ENSSLDG00000019060	trmt13	97	74.255	ENSACLG00000020018	trmt13	100	74.255	Astatotilapia_calliptera
ENSSLDG00000019060	trmt13	98	53.673	ENSAMXG00000017963	trmt13	99	54.082	Astyanax_mexicanus
ENSSLDG00000019060	trmt13	96	50.734	ENSBTAG00000015781	TRMT13	95	50.734	Bos_taurus
ENSSLDG00000019060	trmt13	98	50.206	ENSCJAG00000000200	TRMT13	97	55.556	Callithrix_jacchus
ENSSLDG00000019060	trmt13	64	49.074	ENSCAFG00000020021	TRMT13	97	49.074	Canis_familiaris
ENSSLDG00000019060	trmt13	58	54.839	ENSCAFG00020011572	TRMT13	94	54.839	Canis_lupus_dingo
ENSSLDG00000019060	trmt13	97	50.308	ENSCHIG00000015395	TRMT13	98	50.308	Capra_hircus
ENSSLDG00000019060	trmt13	97	50.412	ENSTSYG00000010811	TRMT13	99	51.235	Carlito_syrichta
ENSSLDG00000019060	trmt13	73	39.276	ENSCAPG00000009085	TRMT13	94	40.947	Cavia_aperea
ENSSLDG00000019060	trmt13	98	50.924	ENSCPOG00000000694	TRMT13	96	51.046	Cavia_porcellus
ENSSLDG00000019060	trmt13	98	50.513	ENSCCAG00000023772	TRMT13	98	55.556	Cebus_capucinus
ENSSLDG00000019060	trmt13	98	50.719	ENSCATG00000033556	TRMT13	98	57.407	Cercocebus_atys
ENSSLDG00000019060	trmt13	87	50.939	ENSCLAG00000008220	TRMT13	98	50.939	Chinchilla_lanigera
ENSSLDG00000019060	trmt13	98	50.513	ENSCSAG00000001506	TRMT13	98	50.513	Chlorocebus_sabaeus
ENSSLDG00000019060	trmt13	98	49.388	ENSCPBG00000026671	TRMT13	99	49.388	Chrysemys_picta_bellii
ENSSLDG00000019060	trmt13	98	50.513	ENSCANG00000034659	TRMT13	98	56.481	Colobus_angolensis_palliatus
ENSSLDG00000019060	trmt13	98	50.204	ENSCGRG00001021601	Trmt13	98	50.204	Cricetulus_griseus_chok1gshd
ENSSLDG00000019060	trmt13	51	47.308	ENSCGRG00000000093	-	96	47.308	Cricetulus_griseus_crigri
ENSSLDG00000019060	trmt13	99	66.736	ENSCSEG00000000591	trmt13	100	66.736	Cynoglossus_semilaevis
ENSSLDG00000019060	trmt13	97	71.429	ENSCVAG00000017342	trmt13	94	71.429	Cyprinodon_variegatus
ENSSLDG00000019060	trmt13	97	55.414	ENSDARG00000102846	trmt13	97	55.414	Danio_rerio
ENSSLDG00000019060	trmt13	55	55.762	ENSDNOG00000001710	TRMT13	80	55.762	Dasypus_novemcinctus
ENSSLDG00000019060	trmt13	96	50.207	ENSDORG00000015808	Trmt13	96	50.207	Dipodomys_ordii
ENSSLDG00000019060	trmt13	98	33.538	FBgn0037435	CG18048	97	33.742	Drosophila_melanogaster
ENSSLDG00000019060	trmt13	96	45.322	ENSETEG00000005819	TRMT13	96	45.322	Echinops_telfairi
ENSSLDG00000019060	trmt13	80	59.259	ENSEBUG00000014444	trmt13	96	43.290	Eptatretus_burgeri
ENSSLDG00000019060	trmt13	95	50.844	ENSEASG00005015918	TRMT13	95	50.844	Equus_asinus_asinus
ENSSLDG00000019060	trmt13	95	50.633	ENSECAG00000022626	TRMT13	95	50.633	Equus_caballus
ENSSLDG00000019060	trmt13	72	52.727	ENSEEUG00000000294	TRMT13	73	52.727	Erinaceus_europaeus
ENSSLDG00000019060	trmt13	97	55.115	ENSELUG00000003803	trmt13	99	56.458	Esox_lucius
ENSSLDG00000019060	trmt13	98	48.671	ENSFCAG00000030618	TRMT13	98	50.000	Felis_catus
ENSSLDG00000019060	trmt13	95	52.008	ENSFALG00000002424	TRMT13	95	52.008	Ficedula_albicollis
ENSSLDG00000019060	trmt13	98	50.000	ENSFDAG00000006342	TRMT13	97	50.000	Fukomys_damarensis
ENSSLDG00000019060	trmt13	81	74.046	ENSFHEG00000022954	trmt13	100	73.913	Fundulus_heteroclitus
ENSSLDG00000019060	trmt13	95	53.696	ENSGMOG00000013223	trmt13	100	54.803	Gadus_morhua
ENSSLDG00000019060	trmt13	95	51.392	ENSGALG00000005290	TRMT13	99	50.719	Gallus_gallus
ENSSLDG00000019060	trmt13	78	67.717	ENSGAFG00000001577	trmt13	82	67.717	Gambusia_affinis
ENSSLDG00000019060	trmt13	98	76.321	ENSGACG00000013428	trmt13	99	77.590	Gasterosteus_aculeatus
ENSSLDG00000019060	trmt13	97	49.794	ENSGAGG00000023303	TRMT13	97	57.818	Gopherus_agassizii
ENSSLDG00000019060	trmt13	98	50.103	ENSGGOG00000005616	TRMT13	99	55.046	Gorilla_gorilla
ENSSLDG00000019060	trmt13	97	74.468	ENSHBUG00000007754	trmt13	100	74.468	Haplochromis_burtoni
ENSSLDG00000019060	trmt13	98	49.795	ENSHGLG00000002164	TRMT13	97	49.795	Heterocephalus_glaber_female
ENSSLDG00000019060	trmt13	98	49.795	ENSHGLG00100001618	TRMT13	97	49.795	Heterocephalus_glaber_male
ENSSLDG00000019060	trmt13	97	55.368	ENSHCOG00000020553	trmt13	99	55.368	Hippocampus_comes
ENSSLDG00000019060	trmt13	98	55.021	ENSIPUG00000024787	trmt13	99	55.649	Ictalurus_punctatus
ENSSLDG00000019060	trmt13	95	50.000	ENSSTOG00000013483	TRMT13	95	50.000	Ictidomys_tridecemlineatus
ENSSLDG00000019060	trmt13	98	49.284	ENSJJAG00000018012	Trmt13	98	49.489	Jaculus_jaculus
ENSSLDG00000019060	trmt13	65	70.607	ENSKMAG00000007639	trmt13	89	70.470	Kryptolebias_marmoratus
ENSSLDG00000019060	trmt13	97	74.207	ENSLBEG00000020238	trmt13	99	75.316	Labrus_bergylta
ENSSLDG00000019060	trmt13	96	53.474	ENSLACG00000013153	TRMT13	99	51.707	Latimeria_chalumnae
ENSSLDG00000019060	trmt13	98	53.512	ENSLOCG00000000418	trmt13	99	54.132	Lepisosteus_oculatus
ENSSLDG00000019060	trmt13	76	50.928	ENSLAFG00000002383	TRMT13	98	50.928	Loxodonta_africana
ENSSLDG00000019060	trmt13	98	50.513	ENSMFAG00000034681	TRMT13	98	56.481	Macaca_fascicularis
ENSSLDG00000019060	trmt13	98	50.513	ENSMMUG00000004243	TRMT13	98	56.481	Macaca_mulatta
ENSSLDG00000019060	trmt13	98	50.513	ENSMNEG00000036102	TRMT13	98	56.481	Macaca_nemestrina
ENSSLDG00000019060	trmt13	98	50.308	ENSMLEG00000034258	TRMT13	98	55.556	Mandrillus_leucophaeus
ENSSLDG00000019060	trmt13	95	79.221	ENSMAMG00000016597	trmt13	96	79.221	Mastacembelus_armatus
ENSSLDG00000019060	trmt13	97	74.255	ENSMZEG00005020959	trmt13	100	74.255	Maylandia_zebra
ENSSLDG00000019060	trmt13	87	53.613	ENSMGAG00000006970	TRMT13	98	53.613	Meleagris_gallopavo
ENSSLDG00000019060	trmt13	97	50.104	ENSMAUG00000010448	Trmt13	96	50.104	Mesocricetus_auratus
ENSSLDG00000019060	trmt13	96	51.782	ENSMICG00000005283	TRMT13	95	51.782	Microcebus_murinus
ENSSLDG00000019060	trmt13	97	50.518	ENSMOCG00000019914	Trmt13	97	50.518	Microtus_ochrogaster
ENSSLDG00000019060	trmt13	55	66.791	ENSMMOG00000007762	trmt13	90	66.791	Mola_mola
ENSSLDG00000019060	trmt13	99	48.497	ENSMODG00000003646	TRMT13	99	48.497	Monodelphis_domestica
ENSSLDG00000019060	trmt13	98	74.098	ENSMALG00000020965	trmt13	98	74.098	Monopterus_albus
ENSSLDG00000019060	trmt13	98	49.797	MGP_CAROLIEiJ_G0025568	Trmt13	99	52.174	Mus_caroli
ENSSLDG00000019060	trmt13	99	49.798	ENSMUSG00000033439	Trmt13	98	52.198	Mus_musculus
ENSSLDG00000019060	trmt13	98	50.102	MGP_PahariEiJ_G0027014	Trmt13	99	51.087	Mus_pahari
ENSSLDG00000019060	trmt13	97	50.513	MGP_SPRETEiJ_G0026518	Trmt13	98	52.198	Mus_spretus
ENSSLDG00000019060	trmt13	76	50.538	ENSMPUG00000002078	-	96	50.538	Mustela_putorius_furo
ENSSLDG00000019060	trmt13	97	51.139	ENSMLUG00000002124	TRMT13	96	51.139	Myotis_lucifugus
ENSSLDG00000019060	trmt13	98	69.345	ENSNBRG00000006783	trmt13	99	69.345	Neolamprologus_brichardi
ENSSLDG00000019060	trmt13	98	50.103	ENSNLEG00000035917	TRMT13	98	55.556	Nomascus_leucogenys
ENSSLDG00000019060	trmt13	52	45.850	ENSMEUG00000013346	-	99	45.850	Notamacropus_eugenii
ENSSLDG00000019060	trmt13	55	56.716	ENSOPRG00000012048	TRMT13	54	56.716	Ochotona_princeps
ENSSLDG00000019060	trmt13	97	74.630	ENSONIG00000004574	trmt13	100	74.630	Oreochromis_niloticus
ENSSLDG00000019060	trmt13	88	51.364	ENSOANG00000012057	TRMT13	97	51.364	Ornithorhynchus_anatinus
ENSSLDG00000019060	trmt13	96	50.210	ENSOCUG00000023095	TRMT13	96	50.210	Oryctolagus_cuniculus
ENSSLDG00000019060	trmt13	98	64.570	ENSORLG00000003320	trmt13	99	64.449	Oryzias_latipes
ENSSLDG00000019060	trmt13	96	66.738	ENSORLG00020005972	trmt13	98	66.738	Oryzias_latipes_hni
ENSSLDG00000019060	trmt13	98	70.613	ENSORLG00015002270	trmt13	99	70.613	Oryzias_latipes_hsok
ENSSLDG00000019060	trmt13	98	70.402	ENSOMEG00000006724	trmt13	96	69.958	Oryzias_melastigma
ENSSLDG00000019060	trmt13	96	50.104	ENSOGAG00000005618	TRMT13	93	50.104	Otolemur_garnettii
ENSSLDG00000019060	trmt13	97	50.308	ENSOARG00000017983	TRMT13	98	50.308	Ovis_aries
ENSSLDG00000019060	trmt13	98	49.898	ENSPPAG00000043736	TRMT13	99	55.046	Pan_paniscus
ENSSLDG00000019060	trmt13	98	48.671	ENSPPRG00000003424	TRMT13	98	50.000	Panthera_pardus
ENSSLDG00000019060	trmt13	98	48.671	ENSPTIG00000018598	TRMT13	98	50.000	Panthera_tigris_altaica
ENSSLDG00000019060	trmt13	98	49.898	ENSPTRG00000001001	TRMT13	99	55.046	Pan_troglodytes
ENSSLDG00000019060	trmt13	98	50.513	ENSPANG00000007598	TRMT13	98	56.481	Papio_anubis
ENSSLDG00000019060	trmt13	97	54.757	ENSPKIG00000001514	trmt13	99	54.757	Paramormyrops_kingsleyae
ENSSLDG00000019060	trmt13	87	49.188	ENSPSIG00000012703	TRMT13	99	49.188	Pelodiscus_sinensis
ENSSLDG00000019060	trmt13	98	62.633	ENSPMGG00000013298	trmt13	95	62.633	Periophthalmus_magnuspinnatus
ENSSLDG00000019060	trmt13	96	50.734	ENSPEMG00000000275	Trmt13	95	50.734	Peromyscus_maniculatus_bairdii
ENSSLDG00000019060	trmt13	96	47.465	ENSPMAG00000000823	trmt13	99	46.813	Petromyzon_marinus
ENSSLDG00000019060	trmt13	96	50.312	ENSPCIG00000007699	TRMT13	97	50.620	Phascolarctos_cinereus
ENSSLDG00000019060	trmt13	95	65.801	ENSPFOG00000008675	trmt13	95	65.801	Poecilia_formosa
ENSSLDG00000019060	trmt13	96	65.745	ENSPLAG00000009709	trmt13	99	65.745	Poecilia_latipinna
ENSSLDG00000019060	trmt13	96	65.605	ENSPMEG00000022954	trmt13	99	65.605	Poecilia_mexicana
ENSSLDG00000019060	trmt13	78	69.372	ENSPREG00000005645	trmt13	96	64.846	Poecilia_reticulata
ENSSLDG00000019060	trmt13	98	50.513	ENSPPYG00000001120	TRMT13	98	50.103	Pongo_abelii
ENSSLDG00000019060	trmt13	96	50.844	ENSPCAG00000002340	TRMT13	95	50.844	Procavia_capensis
ENSSLDG00000019060	trmt13	96	50.524	ENSPCOG00000017984	TRMT13	95	50.524	Propithecus_coquereli
ENSSLDG00000019060	trmt13	96	50.104	ENSPVAG00000017430	TRMT13	95	50.104	Pteropus_vampyrus
ENSSLDG00000019060	trmt13	97	71.702	ENSPNYG00000013690	trmt13	100	71.702	Pundamilia_nyererei
ENSSLDG00000019060	trmt13	98	55.717	ENSPNAG00000022130	trmt13	99	55.717	Pygocentrus_nattereri
ENSSLDG00000019060	trmt13	96	50.208	ENSRNOG00000015140	Trmt13	93	50.208	Rattus_norvegicus
ENSSLDG00000019060	trmt13	98	50.513	ENSRBIG00000037686	TRMT13	98	56.481	Rhinopithecus_bieti
ENSSLDG00000019060	trmt13	98	50.513	ENSRROG00000044057	TRMT13	98	56.481	Rhinopithecus_roxellana
ENSSLDG00000019060	trmt13	98	50.102	ENSSBOG00000026541	TRMT13	98	55.556	Saimiri_boliviensis_boliviensis
ENSSLDG00000019060	trmt13	90	50.333	ENSSHAG00000005213	TRMT13	96	50.333	Sarcophilus_harrisii
ENSSLDG00000019060	trmt13	98	55.975	ENSSFOG00015017560	trmt13	99	55.975	Scleropages_formosus
ENSSLDG00000019060	trmt13	99	77.662	ENSSMAG00000014592	trmt13	99	77.662	Scophthalmus_maximus
ENSSLDG00000019060	trmt13	100	97.723	ENSSDUG00000015508	trmt13	99	97.723	Seriola_dumerili
ENSSLDG00000019060	trmt13	96	45.868	ENSSARG00000010344	TRMT13	98	45.868	Sorex_araneus
ENSSLDG00000019060	trmt13	95	50.426	ENSSPUG00000016339	TRMT13	98	50.426	Sphenodon_punctatus
ENSSLDG00000019060	trmt13	96	76.344	ENSSPAG00000011922	trmt13	99	76.008	Stegastes_partitus
ENSSLDG00000019060	trmt13	96	51.050	ENSSSCG00000006869	TRMT13	96	51.050	Sus_scrofa
ENSSLDG00000019060	trmt13	96	53.376	ENSTGUG00000005253	TRMT13	98	53.165	Taeniopygia_guttata
ENSSLDG00000019060	trmt13	96	65.190	ENSTRUG00000008400	trmt13	99	64.990	Takifugu_rubripes
ENSSLDG00000019060	trmt13	85	38.902	ENSTBEG00000008911	TRMT13	98	38.902	Tupaia_belangeri
ENSSLDG00000019060	trmt13	96	49.156	ENSUAMG00000017251	TRMT13	95	49.156	Ursus_americanus
ENSSLDG00000019060	trmt13	96	51.368	ENSUMAG00000007901	TRMT13	98	51.131	Ursus_maritimus
ENSSLDG00000019060	trmt13	89	39.729	ENSVPAG00000001034	TRMT13	85	54.839	Vicugna_pacos
ENSSLDG00000019060	trmt13	98	49.695	ENSVVUG00000021996	TRMT13	98	49.695	Vulpes_vulpes
ENSSLDG00000019060	trmt13	96	51.188	ENSXETG00000013204	trmt13	98	50.964	Xenopus_tropicalis
ENSSLDG00000019060	trmt13	96	65.180	ENSXMAG00000010765	trmt13	99	65.180	Xiphophorus_maculatus