EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000019145 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: uncharacterized LOC111657702
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 6254 bases
Position: chrPEQF01098890.1:83846-90099
Accession: 111657702
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000024579	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025356	-	2620	XM_023409990	ENSSLDP00000024579	451 (aa)	XP_023265758	UPI000C6F9C58

Gene Model

Click here to download ENSSLDG00000019145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019145's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000019145	si:ch211-11k18.4	98	59.101	ENSSLDG00000025395	si:dkey-98f17.5	99	59.101

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019145	si:ch211-11k18.4	100	93.126	ENSAPOG00000018833	si:ch211-11k18.4	100	93.126	Acanthochromis_polyacanthus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.333	ENSAPOG00000010378	si:dkey-98f17.5	100	59.333	Acanthochromis_polyacanthus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.333	ENSACIG00000017719	si:dkey-98f17.5	100	59.333	Amphilophus_citrinellus
ENSSLDG00000019145	si:ch211-11k18.4	99	87.333	ENSACIG00000006696	si:ch211-11k18.4	99	87.333	Amphilophus_citrinellus
ENSSLDG00000019145	si:ch211-11k18.4	100	94.013	ENSAOCG00000014284	si:ch211-11k18.4	100	94.013	Amphiprion_ocellaris
ENSSLDG00000019145	si:ch211-11k18.4	99	59.556	ENSAOCG00000008661	si:dkey-98f17.5	100	59.556	Amphiprion_ocellaris
ENSSLDG00000019145	si:ch211-11k18.4	100	93.792	ENSAPEG00000014910	si:ch211-11k18.4	100	93.792	Amphiprion_percula
ENSSLDG00000019145	si:ch211-11k18.4	99	59.556	ENSAPEG00000022447	si:dkey-98f17.5	100	59.556	Amphiprion_percula
ENSSLDG00000019145	si:ch211-11k18.4	99	60.222	ENSATEG00000007188	si:dkey-98f17.5	100	60.222	Anabas_testudineus
ENSSLDG00000019145	si:ch211-11k18.4	100	90.909	ENSATEG00000004775	si:ch211-11k18.4	100	90.909	Anabas_testudineus
ENSSLDG00000019145	si:ch211-11k18.4	98	64.574	ENSACAG00000028632	-	98	64.430	Anolis_carolinensis
ENSSLDG00000019145	si:ch211-11k18.4	99	59.556	ENSACLG00000001308	si:dkey-98f17.5	100	59.556	Astatotilapia_calliptera
ENSSLDG00000019145	si:ch211-11k18.4	100	90.244	ENSACLG00000007907	si:ch211-11k18.4	100	90.244	Astatotilapia_calliptera
ENSSLDG00000019145	si:ch211-11k18.4	99	59.111	ENSAMXG00000001190	si:dkey-98f17.5	100	59.111	Astyanax_mexicanus
ENSSLDG00000019145	si:ch211-11k18.4	99	82.667	ENSAMXG00000017817	si:ch211-11k18.4	100	82.667	Astyanax_mexicanus
ENSSLDG00000019145	si:ch211-11k18.4	83	62.434	ENSCING00000020807	-	99	62.434	Ciona_intestinalis
ENSSLDG00000019145	si:ch211-11k18.4	99	58.222	ENSCSAVG00000009987	-	100	58.222	Ciona_savignyi
ENSSLDG00000019145	si:ch211-11k18.4	99	59.778	ENSCSEG00000017512	si:dkey-98f17.5	95	61.220	Cynoglossus_semilaevis
ENSSLDG00000019145	si:ch211-11k18.4	100	85.366	ENSCSEG00000017661	si:ch211-11k18.4	100	85.366	Cynoglossus_semilaevis
ENSSLDG00000019145	si:ch211-11k18.4	99	59.778	ENSCVAG00000011351	si:dkey-98f17.5	100	59.556	Cyprinodon_variegatus
ENSSLDG00000019145	si:ch211-11k18.4	100	89.579	ENSCVAG00000015346	si:ch211-11k18.4	100	89.579	Cyprinodon_variegatus
ENSSLDG00000019145	si:ch211-11k18.4	99	84.667	ENSDARG00000087869	si:ch211-11k18.4	100	90.816	Danio_rerio
ENSSLDG00000019145	si:ch211-11k18.4	98	59.864	ENSDARG00000068863	si:dkey-98f17.5	100	59.637	Danio_rerio
ENSSLDG00000019145	si:ch211-11k18.4	79	59.384	ENSEBUG00000007620	si:dkey-98f17.5	95	59.384	Eptatretus_burgeri
ENSSLDG00000019145	si:ch211-11k18.4	99	58.980	ENSELUG00000003365	si:dkey-98f17.5	100	58.980	Esox_lucius
ENSSLDG00000019145	si:ch211-11k18.4	100	87.805	ENSFHEG00000019820	si:ch211-11k18.4	100	87.805	Fundulus_heteroclitus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.556	ENSFHEG00000012744	si:dkey-98f17.5	100	59.556	Fundulus_heteroclitus
ENSSLDG00000019145	si:ch211-11k18.4	90	80.446	ENSGMOG00000003492	si:ch211-11k18.4	100	80.446	Gadus_morhua
ENSSLDG00000019145	si:ch211-11k18.4	99	58.889	ENSGAFG00000012362	si:dkey-98f17.5	89	58.889	Gambusia_affinis
ENSSLDG00000019145	si:ch211-11k18.4	100	87.140	ENSGAFG00000005677	si:ch211-11k18.4	100	87.140	Gambusia_affinis
ENSSLDG00000019145	si:ch211-11k18.4	58	73.846	ENSGACG00000009399	si:dkey-98f17.5	100	73.846	Gasterosteus_aculeatus
ENSSLDG00000019145	si:ch211-11k18.4	90	89.356	ENSGACG00000013134	si:ch211-11k18.4	100	89.356	Gasterosteus_aculeatus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.778	ENSHBUG00000008331	si:dkey-98f17.5	100	59.778	Haplochromis_burtoni
ENSSLDG00000019145	si:ch211-11k18.4	100	90.466	ENSHBUG00000020638	si:ch211-11k18.4	100	90.466	Haplochromis_burtoni
ENSSLDG00000019145	si:ch211-11k18.4	99	57.399	ENSHCOG00000016505	si:dkey-98f17.5	98	57.175	Hippocampus_comes
ENSSLDG00000019145	si:ch211-11k18.4	99	88.222	ENSHCOG00000014773	si:ch211-11k18.4	100	88.222	Hippocampus_comes
ENSSLDG00000019145	si:ch211-11k18.4	96	78.472	ENSIPUG00000016678	si:ch211-11k18.4	99	78.935	Ictalurus_punctatus
ENSSLDG00000019145	si:ch211-11k18.4	99	57.522	ENSIPUG00000019981	si:dkey-98f17.5	100	57.080	Ictalurus_punctatus
ENSSLDG00000019145	si:ch211-11k18.4	90	68.564	ENSIPUG00000016694	si:ch211-11k18.4	89	68.564	Ictalurus_punctatus
ENSSLDG00000019145	si:ch211-11k18.4	99	89.111	ENSKMAG00000009327	si:ch211-11k18.4	99	89.111	Kryptolebias_marmoratus
ENSSLDG00000019145	si:ch211-11k18.4	99	58.222	ENSKMAG00000014997	si:dkey-98f17.5	100	58.222	Kryptolebias_marmoratus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.333	ENSLBEG00000012756	si:dkey-98f17.5	100	59.333	Labrus_bergylta
ENSSLDG00000019145	si:ch211-11k18.4	99	71.175	ENSLACG00000006280	si:ch211-11k18.4	100	71.175	Latimeria_chalumnae
ENSSLDG00000019145	si:ch211-11k18.4	98	59.819	ENSLACG00000017433	si:dkey-98f17.5	97	59.819	Latimeria_chalumnae
ENSSLDG00000019145	si:ch211-11k18.4	99	62.222	ENSLACG00000004899	-	99	62.222	Latimeria_chalumnae
ENSSLDG00000019145	si:ch211-11k18.4	99	58.980	ENSLOCG00000003824	si:dkey-98f17.5	99	58.980	Lepisosteus_oculatus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.333	ENSMAMG00000014528	si:dkey-98f17.5	100	59.333	Mastacembelus_armatus
ENSSLDG00000019145	si:ch211-11k18.4	96	92.130	ENSMAMG00000002536	si:ch211-11k18.4	99	92.130	Mastacembelus_armatus
ENSSLDG00000019145	si:ch211-11k18.4	100	90.022	ENSMZEG00005008941	si:ch211-11k18.4	100	90.022	Maylandia_zebra
ENSSLDG00000019145	si:ch211-11k18.4	99	59.778	ENSMZEG00005016572	si:dkey-98f17.5	100	59.778	Maylandia_zebra
ENSSLDG00000019145	si:ch211-11k18.4	100	82.705	ENSMMOG00000012485	si:ch211-11k18.4	100	82.705	Mola_mola
ENSSLDG00000019145	si:ch211-11k18.4	100	89.800	ENSMALG00000019735	si:ch211-11k18.4	100	89.800	Monopterus_albus
ENSSLDG00000019145	si:ch211-11k18.4	98	59.545	ENSMALG00000012761	si:dkey-98f17.5	100	60.000	Monopterus_albus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.688	ENSNBRG00000006068	si:dkey-98f17.5	100	59.688	Neolamprologus_brichardi
ENSSLDG00000019145	si:ch211-11k18.4	96	90.046	ENSNBRG00000002220	si:ch211-11k18.4	98	90.046	Neolamprologus_brichardi
ENSSLDG00000019145	si:ch211-11k18.4	100	90.244	ENSONIG00000019412	si:ch211-11k18.4	100	90.244	Oreochromis_niloticus
ENSSLDG00000019145	si:ch211-11k18.4	99	60.000	ENSONIG00000013568	si:dkey-98f17.5	100	60.000	Oreochromis_niloticus
ENSSLDG00000019145	si:ch211-11k18.4	100	86.696	ENSORLG00000012015	si:ch211-11k18.4	100	86.696	Oryzias_latipes
ENSSLDG00000019145	si:ch211-11k18.4	91	60.000	ENSORLG00000007958	si:dkey-98f17.5	95	60.000	Oryzias_latipes
ENSSLDG00000019145	si:ch211-11k18.4	100	86.253	ENSORLG00020012386	si:ch211-11k18.4	100	86.253	Oryzias_latipes_hni
ENSSLDG00000019145	si:ch211-11k18.4	99	58.667	ENSORLG00020013350	si:dkey-98f17.5	100	58.667	Oryzias_latipes_hni
ENSSLDG00000019145	si:ch211-11k18.4	100	87.140	ENSORLG00015022862	si:ch211-11k18.4	100	87.140	Oryzias_latipes_hsok
ENSSLDG00000019145	si:ch211-11k18.4	99	58.667	ENSORLG00015002000	si:dkey-98f17.5	100	58.667	Oryzias_latipes_hsok
ENSSLDG00000019145	si:ch211-11k18.4	99	58.667	ENSOMEG00000003154	si:dkey-98f17.5	100	58.716	Oryzias_melastigma
ENSSLDG00000019145	si:ch211-11k18.4	100	88.248	ENSOMEG00000018686	si:ch211-11k18.4	100	88.248	Oryzias_melastigma
ENSSLDG00000019145	si:ch211-11k18.4	99	80.889	ENSPKIG00000018807	si:ch211-11k18.4	100	80.889	Paramormyrops_kingsleyae
ENSSLDG00000019145	si:ch211-11k18.4	99	60.000	ENSPKIG00000024621	si:dkey-98f17.5	100	60.000	Paramormyrops_kingsleyae
ENSSLDG00000019145	si:ch211-11k18.4	99	76.667	ENSPKIG00000023918	-	98	76.667	Paramormyrops_kingsleyae
ENSSLDG00000019145	si:ch211-11k18.4	100	88.027	ENSPMGG00000016507	si:ch211-11k18.4	100	88.027	Periophthalmus_magnuspinnatus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.556	ENSPMGG00000019065	si:dkey-98f17.5	100	59.556	Periophthalmus_magnuspinnatus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.161	ENSPFOG00000015142	si:dkey-98f17.5	100	59.161	Poecilia_formosa
ENSSLDG00000019145	si:ch211-11k18.4	100	88.914	ENSPFOG00000007976	si:ch211-11k18.4	100	88.914	Poecilia_formosa
ENSSLDG00000019145	si:ch211-11k18.4	99	59.111	ENSPLAG00000003709	si:dkey-98f17.5	100	59.111	Poecilia_latipinna
ENSSLDG00000019145	si:ch211-11k18.4	100	88.914	ENSPLAG00000019794	si:ch211-11k18.4	100	88.914	Poecilia_latipinna
ENSSLDG00000019145	si:ch211-11k18.4	99	59.111	ENSPMEG00000018709	si:dkey-98f17.5	94	59.111	Poecilia_mexicana
ENSSLDG00000019145	si:ch211-11k18.4	100	88.692	ENSPMEG00000024198	si:ch211-11k18.4	100	88.692	Poecilia_mexicana
ENSSLDG00000019145	si:ch211-11k18.4	98	59.773	ENSPREG00000000708	si:dkey-98f17.5	100	59.773	Poecilia_reticulata
ENSSLDG00000019145	si:ch211-11k18.4	93	83.529	ENSPREG00000015319	si:ch211-11k18.4	97	83.529	Poecilia_reticulata
ENSSLDG00000019145	si:ch211-11k18.4	100	90.244	ENSPNYG00000017099	si:ch211-11k18.4	100	90.244	Pundamilia_nyererei
ENSSLDG00000019145	si:ch211-11k18.4	99	59.778	ENSPNYG00000017266	si:dkey-98f17.5	100	59.778	Pundamilia_nyererei
ENSSLDG00000019145	si:ch211-11k18.4	99	59.111	ENSPNAG00000021352	si:dkey-98f17.5	100	59.111	Pygocentrus_nattereri
ENSSLDG00000019145	si:ch211-11k18.4	99	84.410	ENSPNAG00000022138	si:ch211-11k18.4	99	84.410	Pygocentrus_nattereri
ENSSLDG00000019145	si:ch211-11k18.4	99	57.930	ENSSFOG00015017965	si:dkey-98f17.5	100	57.837	Scleropages_formosus
ENSSLDG00000019145	si:ch211-11k18.4	99	78.174	ENSSFOG00015000985	si:ch211-11k18.4	94	78.174	Scleropages_formosus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.111	ENSSMAG00000011905	si:dkey-98f17.5	100	59.111	Scophthalmus_maximus
ENSSLDG00000019145	si:ch211-11k18.4	100	92.461	ENSSMAG00000009651	si:ch211-11k18.4	100	92.461	Scophthalmus_maximus
ENSSLDG00000019145	si:ch211-11k18.4	100	99.557	ENSSDUG00000016411	si:ch211-11k18.4	100	99.557	Seriola_dumerili
ENSSLDG00000019145	si:ch211-11k18.4	98	59.326	ENSSDUG00000013457	si:dkey-98f17.5	99	59.326	Seriola_dumerili
ENSSLDG00000019145	si:ch211-11k18.4	87	65.228	ENSSPUG00000010096	-	99	65.228	Sphenodon_punctatus
ENSSLDG00000019145	si:ch211-11k18.4	100	92.461	ENSSPAG00000010697	si:ch211-11k18.4	100	92.461	Stegastes_partitus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.778	ENSSPAG00000018800	si:dkey-98f17.5	100	59.556	Stegastes_partitus
ENSSLDG00000019145	si:ch211-11k18.4	100	87.805	ENSTRUG00000020291	si:ch211-11k18.4	100	87.805	Takifugu_rubripes
ENSSLDG00000019145	si:ch211-11k18.4	99	58.667	ENSTRUG00000021287	si:dkey-98f17.5	100	58.667	Takifugu_rubripes
ENSSLDG00000019145	si:ch211-11k18.4	99	66.150	ENSXETG00000031783	-	99	66.150	Xenopus_tropicalis
ENSSLDG00000019145	si:ch211-11k18.4	100	83.592	ENSXCOG00000018094	si:ch211-11k18.4	100	83.186	Xiphophorus_couchianus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.465	ENSXCOG00000017002	si:dkey-98f17.5	100	59.465	Xiphophorus_couchianus
ENSSLDG00000019145	si:ch211-11k18.4	100	89.135	ENSXMAG00000021235	si:ch211-11k18.4	100	89.135	Xiphophorus_maculatus
ENSSLDG00000019145	si:ch211-11k18.4	99	59.111	ENSXMAG00000007688	si:dkey-98f17.5	95	58.889	Xiphophorus_maculatus