EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000019146 (Gene tree)
Gene ID
-
Gene Symbol
patl1
Alias
fa11d04|wu:fa11d04|zgc:158239
Full Name
protein PAT1 homolog 1-like
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
16047 bases
Position
chrPEQF01099399.1:1273276-1289322
Accession
111673583
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000024650PAT1PF09770.91.4e-1311
ENSSLDP00000024613PAT1PF09770.91.7e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000025390-3068XM_023431391ENSSLDP00000024613840 (aa)XP_023287159UPI000C6F9F30
ENSSLDT00000025429-2966-ENSSLDP00000024650806 (aa)--
Gene Model
Click here to download ENSSLDG00000019146's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019146's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000019146patl15035.867ENSSLDG00000017922patl26035.766
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000019146patl17958.333ENSG00000166889PATL19266.667Homo_sapiens
ENSSLDG00000019146patl15036.425ENSG00000229474PATL29938.292Homo_sapiens
ENSSLDG00000019146patl15434.979ENSAPOG00000022988patl26135.167Acanthochromis_polyacanthus
ENSSLDG00000019146patl18290.514ENSAPOG00000021290patl19984.795Acanthochromis_polyacanthus
ENSSLDG00000019146patl17958.333ENSAMEG00000014215PATL19266.667Ailuropoda_melanoleuca
ENSSLDG00000019146patl19978.495ENSACIG00000005182patl19691.892Amphilophus_citrinellus
ENSSLDG00000019146patl15034.824ENSAOCG00000023738patl25534.123Amphiprion_ocellaris
ENSSLDG00000019146patl19581.108ENSAOCG00000021993patl19580.803Amphiprion_ocellaris
ENSSLDG00000019146patl15034.515ENSAPEG00000011299patl26534.293Amphiprion_percula
ENSSLDG00000019146patl110086.667ENSAPEG00000021391patl110086.833Amphiprion_percula
ENSSLDG00000019146patl15434.934ENSATEG00000019567patl26235.539Anabas_testudineus
ENSSLDG00000019146patl110084.423ENSATEG00000002230patl110082.901Anabas_testudineus
ENSSLDG00000019146patl16236.822ENSAPLG00000003980PATL26439.651Anas_platyrhynchos
ENSSLDG00000019146patl15048.491ENSAPLG00000013394PATL19346.652Anas_platyrhynchos
ENSSLDG00000019146patl17562.712ENSACAG00000006607PATL18962.712Anolis_carolinensis
ENSSLDG00000019146patl17958.333ENSANAG00000023078PATL19266.667Aotus_nancymaae
ENSSLDG00000019146patl15035.492ENSACLG00000010326patl25634.532Astatotilapia_calliptera
ENSSLDG00000019146patl110085.476ENSACLG00000005144patl110085.476Astatotilapia_calliptera
ENSSLDG00000019146patl19587.688ENSAMXG00000010731patl19987.500Astyanax_mexicanus
ENSSLDG00000019146patl16134.893ENSAMXG00000020293patl26136.300Astyanax_mexicanus
ENSSLDG00000019146patl17958.333ENSBTAG00000005913PATL19266.667Bos_taurus
ENSSLDG00000019146patl17958.333ENSCJAG00000016192PATL19266.667Callithrix_jacchus
ENSSLDG00000019146patl15335.491ENSCJAG00000002379PATL27736.552Callithrix_jacchus
ENSSLDG00000019146patl17958.333ENSCAFG00000007581PATL19266.667Canis_familiaris
ENSSLDG00000019146patl15037.440ENSCAFG00000013629PATL27437.621Canis_familiaris
ENSSLDG00000019146patl17958.333ENSCAFG00020001648PATL19266.667Canis_lupus_dingo
ENSSLDG00000019146patl15037.440ENSCAFG00020022169PATL27437.621Canis_lupus_dingo
ENSSLDG00000019146patl17958.333ENSCHIG00000025913PATL19266.667Capra_hircus
ENSSLDG00000019146patl15437.029ENSCHIG00000026665PATL27737.650Capra_hircus
ENSSLDG00000019146patl18059.722ENSTSYG00000012748PATL18866.667Carlito_syrichta
ENSSLDG00000019146patl15236.117ENSTSYG00000032456PATL27336.765Carlito_syrichta
ENSSLDG00000019146patl17662.500ENSCAPG00000013668PATL19168.333Cavia_aperea
ENSSLDG00000019146patl17662.500ENSCPOG00000006827PATL19268.333Cavia_porcellus
ENSSLDG00000019146patl15336.117ENSCCAG00000025261PATL27337.592Cebus_capucinus
ENSSLDG00000019146patl17958.333ENSCCAG00000023759PATL19266.667Cebus_capucinus
ENSSLDG00000019146patl15036.652ENSCATG00000034794PATL29938.292Cercocebus_atys
ENSSLDG00000019146patl17958.333ENSCATG00000009629PATL19266.667Cercocebus_atys
ENSSLDG00000019146patl15035.731ENSCLAG00000014407PATL27337.270Chinchilla_lanigera
ENSSLDG00000019146patl17862.500ENSCLAG00000003427PATL19169.231Chinchilla_lanigera
ENSSLDG00000019146patl17148.550ENSCSAG00000006095PATL19347.939Chlorocebus_sabaeus
ENSSLDG00000019146patl15954.667ENSCHOG00000001611PATL18354.000Choloepus_hoffmanni
ENSSLDG00000019146patl15337.528ENSCPBG00000006150PATL26238.554Chrysemys_picta_bellii
ENSSLDG00000019146patl17957.746ENSCANG00000039197PATL19166.102Colobus_angolensis_palliatus
ENSSLDG00000019146patl15336.425ENSCANG00000013856PATL27437.805Colobus_angolensis_palliatus
ENSSLDG00000019146patl17866.667ENSCGRG00001024927Patl19266.667Cricetulus_griseus_chok1gshd
ENSSLDG00000019146patl15435.412ENSCGRG00001010801Patl27637.150Cricetulus_griseus_chok1gshd
ENSSLDG00000019146patl15435.412ENSCGRG00000013007Patl27637.150Cricetulus_griseus_crigri
ENSSLDG00000019146patl17767.308ENSCGRG00000000461Patl19167.308Cricetulus_griseus_crigri
ENSSLDG00000019146patl15134.033ENSCSEG00000009438patl25733.249Cynoglossus_semilaevis
ENSSLDG00000019146patl110085.172ENSCSEG00000008261patl110085.154Cynoglossus_semilaevis
ENSSLDG00000019146patl15433.036ENSCVAG00000016203patl26033.503Cyprinodon_variegatus
ENSSLDG00000019146patl19383.420ENSCVAG00000006664patl19292.500Cyprinodon_variegatus
ENSSLDG00000019146patl110070.190ENSDARG00000017423patl110070.190Danio_rerio
ENSSLDG00000019146patl16956.250ENSDNOG00000038865PATL19946.337Dasypus_novemcinctus
ENSSLDG00000019146patl15036.957ENSDNOG00000036837PATL26936.930Dasypus_novemcinctus
ENSSLDG00000019146patl17959.722ENSDORG00000000237Patl19268.333Dipodomys_ordii
ENSSLDG00000019146patl17958.333ENSEASG00005007963PATL19266.667Equus_asinus_asinus
ENSSLDG00000019146patl15335.388ENSEASG00005017984PATL27336.430Equus_asinus_asinus
ENSSLDG00000019146patl15335.909ENSECAG00000013462PATL27336.983Equus_caballus
ENSSLDG00000019146patl17958.333ENSECAG00000011411PATL19266.667Equus_caballus
ENSSLDG00000019146patl15834.394ENSELUG00000023244patl25735.577Esox_lucius
ENSSLDG00000019146patl110072.792ENSELUG00000024249patl110073.059Esox_lucius
ENSSLDG00000019146patl15337.188ENSFCAG00000027170PATL27537.923Felis_catus
ENSSLDG00000019146patl17958.333ENSFCAG00000015573PATL19266.667Felis_catus
ENSSLDG00000019146patl17959.155ENSFALG00000012150PATL19166.071Ficedula_albicollis
ENSSLDG00000019146patl16234.875ENSFALG00000009768PATL26934.455Ficedula_albicollis
ENSSLDG00000019146patl17859.375ENSFDAG00000016128PATL19167.308Fukomys_damarensis
ENSSLDG00000019146patl19981.078ENSFHEG00000017790patl110080.000Fundulus_heteroclitus
ENSSLDG00000019146patl15036.730ENSGMOG00000005666patl210035.961Gadus_morhua
ENSSLDG00000019146patl15536.306ENSGALG00000002167PATL25038.366Gallus_gallus
ENSSLDG00000019146patl17966.667ENSGALG00000042641PATL19466.667Gallus_gallus
ENSSLDG00000019146patl110081.310ENSGAFG00000006508patl110079.167Gambusia_affinis
ENSSLDG00000019146patl15036.170ENSGAFG00000019344patl25536.203Gambusia_affinis
ENSSLDG00000019146patl18087.931ENSGACG00000016448patl19973.095Gasterosteus_aculeatus
ENSSLDG00000019146patl19250.751ENSGAGG00000004461PATL19368.333Gopherus_agassizii
ENSSLDG00000019146patl17958.333ENSGGOG00000004335PATL19266.667Gorilla_gorilla
ENSSLDG00000019146patl15336.425ENSGGOG00000025923PATL27337.805Gorilla_gorilla
ENSSLDG00000019146patl110085.357ENSHBUG00000005365patl110085.357Haplochromis_burtoni
ENSSLDG00000019146patl17961.111ENSHGLG00000018173PATL19268.333Heterocephalus_glaber_female
ENSSLDG00000019146patl17856.452ENSHGLG00100003453PATL19264.583Heterocephalus_glaber_male
ENSSLDG00000019146patl15036.235ENSHCOG00000016754patl25835.142Hippocampus_comes
ENSSLDG00000019146patl110079.786ENSHCOG00000001898patl110079.548Hippocampus_comes
ENSSLDG00000019146patl15237.529ENSIPUG00000020692patl25637.531Ictalurus_punctatus
ENSSLDG00000019146patl17857.377ENSSTOG00000013764PATL19167.347Ictidomys_tridecemlineatus
ENSSLDG00000019146patl15335.973ENSSTOG00000033848PATL27437.681Ictidomys_tridecemlineatus
ENSSLDG00000019146patl17559.375ENSJJAG00000010135Patl18969.231Jaculus_jaculus
ENSSLDG00000019146patl15034.709ENSKMAG00000021275patl25533.820Kryptolebias_marmoratus
ENSSLDG00000019146patl110084.561ENSKMAG00000020848patl110083.729Kryptolebias_marmoratus
ENSSLDG00000019146patl15135.731ENSLBEG00000022344patl25336.272Labrus_bergylta
ENSSLDG00000019146patl110088.452ENSLBEG00000023617patl110088.571Labrus_bergylta
ENSSLDG00000019146patl17368.750ENSLACG00000004640PATL18968.750Latimeria_chalumnae
ENSSLDG00000019146patl19268.210ENSLOCG00000000717patl19867.445Lepisosteus_oculatus
ENSSLDG00000019146patl18058.333ENSLAFG00000015161PATL19266.667Loxodonta_africana
ENSSLDG00000019146patl17958.333ENSMFAG00000040851PATL19266.667Macaca_fascicularis
ENSSLDG00000019146patl17958.333ENSMMUG00000017287PATL19266.667Macaca_mulatta
ENSSLDG00000019146patl17958.333ENSMNEG00000038692PATL19266.667Macaca_nemestrina
ENSSLDG00000019146patl15336.652ENSMNEG00000034510PATL27438.049Macaca_nemestrina
ENSSLDG00000019146patl15336.652ENSMLEG00000042248PATL27338.049Mandrillus_leucophaeus
ENSSLDG00000019146patl17958.333ENSMLEG00000030044PATL19266.667Mandrillus_leucophaeus
ENSSLDG00000019146patl15034.963ENSMAMG00000013327patl26334.719Mastacembelus_armatus
ENSSLDG00000019146patl110086.002ENSMAMG00000003950patl19990.563Mastacembelus_armatus
ENSSLDG00000019146patl110085.476ENSMZEG00005013404patl110085.476Maylandia_zebra
ENSSLDG00000019146patl15035.492ENSMZEG00005014292patl25634.532Maylandia_zebra
ENSSLDG00000019146patl17267.857ENSMGAG00000003406PATL19267.857Meleagris_gallopavo
ENSSLDG00000019146patl17143.364ENSMAUG00000012059Patl18543.458Mesocricetus_auratus
ENSSLDG00000019146patl15634.043ENSMAUG00000001008Patl27736.341Mesocricetus_auratus
ENSSLDG00000019146patl17958.333ENSMICG00000004172PATL18966.667Microcebus_murinus
ENSSLDG00000019146patl17959.155ENSMOCG00000010087Patl19266.667Microtus_ochrogaster
ENSSLDG00000019146patl17983.972ENSMMOG00000013711patl19884.000Mola_mola
ENSSLDG00000019146patl15237.307ENSMODG00000017690PATL27337.176Monodelphis_domestica
ENSSLDG00000019146patl17852.381ENSMODG00000020201PATL18966.667Monodelphis_domestica
ENSSLDG00000019146patl18880.547ENSMALG00000018706patl110074.279Monopterus_albus
ENSSLDG00000019146patl17959.722MGP_CAROLIEiJ_G0022739Patl19266.667Mus_caroli
ENSSLDG00000019146patl17959.722ENSMUSG00000046139Patl19266.667Mus_musculus
ENSSLDG00000019146patl17959.722MGP_PahariEiJ_G0014233Patl19266.667Mus_pahari
ENSSLDG00000019146patl17959.722MGP_SPRETEiJ_G0023652Patl19266.667Mus_spretus
ENSSLDG00000019146patl17958.333ENSMPUG00000014607PATL19266.667Mustela_putorius_furo
ENSSLDG00000019146patl17958.333ENSMLUG00000011169PATL19166.667Myotis_lucifugus
ENSSLDG00000019146patl17958.333ENSNGAG00000003682Patl19166.667Nannospalax_galili
ENSSLDG00000019146patl15035.613ENSNBRG00000011745patl25935.872Neolamprologus_brichardi
ENSSLDG00000019146patl17181.218ENSNBRG00000015372patl19353.369Neolamprologus_brichardi
ENSSLDG00000019146patl15336.425ENSNLEG00000005673PATL27437.805Nomascus_leucogenys
ENSSLDG00000019146patl17958.333ENSNLEG00000013081PATL19266.667Nomascus_leucogenys
ENSSLDG00000019146patl15653.896ENSMEUG00000009391PATL17353.754Notamacropus_eugenii
ENSSLDG00000019146patl15654.455ENSOPRG00000007963PATL17154.743Ochotona_princeps
ENSSLDG00000019146patl110084.167ENSONIG00000004170patl110085.952Oreochromis_niloticus
ENSSLDG00000019146patl17658.333ENSOCUG00000002156PATL18966.667Oryctolagus_cuniculus
ENSSLDG00000019146patl15334.183ENSOCUG00000006339PATL27736.275Oryctolagus_cuniculus
ENSSLDG00000019146patl15035.597ENSORLG00000005780patl25535.539Oryzias_latipes
ENSSLDG00000019146patl15035.597ENSORLG00020016506patl25435.539Oryzias_latipes_hni
ENSSLDG00000019146patl15035.597ENSORLG00015014500patl25535.539Oryzias_latipes_hsok
ENSSLDG00000019146patl18287.931ENSORLG00015022240patl19080.033Oryzias_latipes_hsok
ENSSLDG00000019146patl15336.446ENSOGAG00000004709PATL27436.946Otolemur_garnettii
ENSSLDG00000019146patl17958.333ENSOGAG00000004351PATL19266.667Otolemur_garnettii
ENSSLDG00000019146patl15236.156ENSOARG00000003762PATL27436.855Ovis_aries
ENSSLDG00000019146patl17857.812ENSOARG00000012005PATL18767.308Ovis_aries
ENSSLDG00000019146patl17958.333ENSPPAG00000034275PATL19266.667Pan_paniscus
ENSSLDG00000019146patl15336.569ENSPPAG00000007221PATL27337.956Pan_paniscus
ENSSLDG00000019146patl15336.652ENSPPRG00000004279PATL27537.530Panthera_pardus
ENSSLDG00000019146patl17857.812ENSPPRG00000020639PATL19167.308Panthera_pardus
ENSSLDG00000019146patl17958.333ENSPTIG00000019298PATL19266.667Panthera_tigris_altaica
ENSSLDG00000019146patl15336.735ENSPTIG00000018964PATL27537.621Panthera_tigris_altaica
ENSSLDG00000019146patl15336.425ENSPTRG00000041536PATL27337.805Pan_troglodytes
ENSSLDG00000019146patl17958.333ENSPTRG00000003697PATL19266.667Pan_troglodytes
ENSSLDG00000019146patl17958.333ENSPANG00000035620PATL19266.667Papio_anubis
ENSSLDG00000019146patl15336.652ENSPANG00000018026PATL27438.049Papio_anubis
ENSSLDG00000019146patl110070.749ENSPKIG00000016224patl110070.868Paramormyrops_kingsleyae
ENSSLDG00000019146patl18166.667ENSPSIG00000016206PATL18966.667Pelodiscus_sinensis
ENSSLDG00000019146patl110077.078ENSPMGG00000002644patl110077.170Periophthalmus_magnuspinnatus
ENSSLDG00000019146patl15034.204ENSPMGG00000014550patl26234.596Periophthalmus_magnuspinnatus
ENSSLDG00000019146patl17866.667ENSPEMG00000014215Patl19266.667Peromyscus_maniculatus_bairdii
ENSSLDG00000019146patl15135.698ENSPEMG00000016509Patl27637.037Peromyscus_maniculatus_bairdii
ENSSLDG00000019146patl15136.364ENSPCIG00000018256PATL28036.585Phascolarctos_cinereus
ENSSLDG00000019146patl18153.571ENSPCIG00000010852PATL19266.667Phascolarctos_cinereus
ENSSLDG00000019146patl15335.828ENSPFOG00000007305patl25435.949Poecilia_formosa
ENSSLDG00000019146patl110079.429ENSPFOG00000007768patl110078.756Poecilia_formosa
ENSSLDG00000019146patl110081.094ENSPLAG00000018465patl110079.191Poecilia_latipinna
ENSSLDG00000019146patl15335.828ENSPLAG00000020713patl25435.949Poecilia_latipinna
ENSSLDG00000019146patl15335.828ENSPMEG00000018942patl25435.949Poecilia_mexicana
ENSSLDG00000019146patl110080.975ENSPMEG00000006555patl110078.954Poecilia_mexicana
ENSSLDG00000019146patl19078.968ENSPREG00000003874patl19576.720Poecilia_reticulata
ENSSLDG00000019146patl17958.333ENSPPYG00000003230PATL19266.667Pongo_abelii
ENSSLDG00000019146patl15338.359ENSPCOG00000000295PATL29940.270Propithecus_coquereli
ENSSLDG00000019146patl17958.333ENSPCOG00000020770PATL19266.667Propithecus_coquereli
ENSSLDG00000019146patl16848.077ENSPVAG00000015239PATL19946.401Pteropus_vampyrus
ENSSLDG00000019146patl17993.168ENSPNYG00000018936patl110093.189Pundamilia_nyererei
ENSSLDG00000019146patl15035.337ENSPNYG00000017381patl26435.096Pundamilia_nyererei
ENSSLDG00000019146patl15236.807ENSPNAG00000002315patl26136.682Pygocentrus_nattereri
ENSSLDG00000019146patl110073.254ENSPNAG00000017907patl110073.665Pygocentrus_nattereri
ENSSLDG00000019146patl17959.722ENSRNOG00000021052Patl19266.667Rattus_norvegicus
ENSSLDG00000019146patl17958.333ENSRBIG00000032263PATL19266.667Rhinopithecus_bieti
ENSSLDG00000019146patl17958.333ENSRROG00000032861PATL19266.667Rhinopithecus_roxellana
ENSSLDG00000019146patl17958.333ENSSBOG00000025195PATL19266.667Saimiri_boliviensis_boliviensis
ENSSLDG00000019146patl18152.381ENSSHAG00000004309PATL19166.667Sarcophilus_harrisii
ENSSLDG00000019146patl110071.310ENSSFOG00015009614patl110071.429Scleropages_formosus
ENSSLDG00000019146patl110087.634ENSSMAG00000009482patl110089.536Scophthalmus_maximus
ENSSLDG00000019146patl15035.407ENSSMAG00000017262patl26634.541Scophthalmus_maximus
ENSSLDG00000019146patl110099.287ENSSDUG00000005362patl110099.287Seriola_dumerili
ENSSLDG00000019146patl15035.225ENSSDUG00000022927patl25434.937Seriola_dumerili
ENSSLDG00000019146patl15849.905ENSSARG00000009600PATL16848.767Sorex_araneus
ENSSLDG00000019146patl17853.772ENSSPUG00000009453PATL18970.000Sphenodon_punctatus
ENSSLDG00000019146patl19291.332ENSSPAG00000003187patl19489.744Stegastes_partitus
ENSSLDG00000019146patl15034.762ENSSPAG00000004784patl26135.013Stegastes_partitus
ENSSLDG00000019146patl17658.333ENSSSCG00000013124PATL18966.667Sus_scrofa
ENSSLDG00000019146patl17957.746ENSTGUG00000006222PATL19266.071Taeniopygia_guttata
ENSSLDG00000019146patl15035.194ENSTRUG00000005647patl25635.385Takifugu_rubripes
ENSSLDG00000019146patl110072.835ENSTRUG00000000709patl110071.770Takifugu_rubripes
ENSSLDG00000019146patl16261.538ENSTBEG00000000796PATL18261.538Tupaia_belangeri
ENSSLDG00000019146patl16253.368ENSTTRG00000009389PATL17954.472Tursiops_truncatus
ENSSLDG00000019146patl17762.500ENSUMAG00000018634PATL19177.778Ursus_maritimus
ENSSLDG00000019146patl17956.944ENSVVUG00000016668PATL19165.000Vulpes_vulpes
ENSSLDG00000019146patl15037.440ENSVVUG00000011576PATL27437.621Vulpes_vulpes
ENSSLDG00000019146patl16793.220ENSXCOG00000010808patl19992.727Xiphophorus_couchianus
ENSSLDG00000019146patl110080.476ENSXMAG00000013834patl110079.286Xiphophorus_maculatus
ENSSLDG00000019146patl15335.828ENSXMAG00000018464patl25435.949Xiphophorus_maculatus

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