EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000019167 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: intracellular hyaluronan-binding protein 4-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2720 bases
Position: chrPEQF01099423.1:708127-710846
Accession: 111645159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000024600	HABP4_PAI-RBP1	PF04774.15	4.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025377	-	899	XM_023394244	ENSSLDP00000024600	264 (aa)	XP_023250012	-

Gene Model

Click here to download ENSSLDG00000019167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019167's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000019167	-	78	40.088	ENSSLDG00000005983	serbp1a	57	39.496
ENSSLDG00000019167	-	60	36.612	ENSSLDG00000020011	serbp1b	57	37.131

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019167	-	96	75.494	ENSAPOG00000018926	-	72	72.453	Acanthochromis_polyacanthus
ENSSLDG00000019167	-	96	77.470	ENSAOCG00000011621	-	73	76.779	Amphiprion_ocellaris
ENSSLDG00000019167	-	96	77.470	ENSAPEG00000006355	-	72	77.358	Amphiprion_percula
ENSSLDG00000019167	-	80	50.000	ENSAMXG00000000297	-	55	50.691	Astyanax_mexicanus
ENSSLDG00000019167	-	100	69.630	ENSCSEG00000017753	-	72	68.148	Cynoglossus_semilaevis
ENSSLDG00000019167	-	76	62.500	ENSGAFG00000012163	-	57	62.673	Gambusia_affinis
ENSSLDG00000019167	-	100	78.788	ENSMAMG00000020735	-	70	77.273	Mastacembelus_armatus
ENSSLDG00000019167	-	79	43.304	ENSMODG00000000514	-	51	43.304	Monodelphis_domestica
ENSSLDG00000019167	-	74	54.822	ENSPMGG00000017136	-	54	55.838	Periophthalmus_magnuspinnatus
ENSSLDG00000019167	-	96	85.039	ENSSMAG00000003212	-	72	84.644	Scophthalmus_maximus
ENSSLDG00000019167	-	100	100.000	ENSSDUG00000002625	-	70	100.000	Seriola_dumerili
ENSSLDG00000019167	-	96	79.842	ENSSPAG00000009182	-	71	79.310	Stegastes_partitus
ENSSLDG00000019167	-	99	70.455	ENSTRUG00000015277	IHABP	71	69.697	Takifugu_rubripes
ENSSLDG00000019167	-	78	42.654	ENSTTRG00000005786	-	50	41.395	Tursiops_truncatus