EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000019214 (Gene tree)
Gene ID: -
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3201 bases
Position: chrPEQF01099386.1:682816-686016
Accession: 111673030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000024658	MMR_HSR1	PF01926.23	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025437	-	1647	XM_023430650	ENSSLDP00000024658	234 (aa)	XP_023286418	UPI000C6FA1D9

Gene Model

Click here to download ENSSLDG00000019214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000019214	zgc:101559	69	42.236	ENSSLDG00000015289	-	76	42.236
ENSSLDG00000019214	zgc:101559	74	39.884	ENSSLDG00000020676	rab11bb	78	39.884
ENSSLDG00000019214	zgc:101559	68	40.625	ENSSLDG00000012091	rab25b	75	40.625
ENSSLDG00000019214	zgc:101559	95	56.054	ENSSLDG00000022004	rab33a	80	56.054
ENSSLDG00000019214	zgc:101559	53	46.400	ENSSLDG00000014812	rab34b	60	46.400
ENSSLDG00000019214	zgc:101559	66	40.260	ENSSLDG00000010880	rab25a	72	40.260
ENSSLDG00000019214	zgc:101559	67	41.667	ENSSLDG00000022555	rab2a	73	41.667
ENSSLDG00000019214	zgc:101559	80	49.761	ENSSLDG00000008070	-	86	49.761
ENSSLDG00000019214	zgc:101559	74	46.821	ENSSLDG00000018024	zgc:171927	78	46.821
ENSSLDG00000019214	zgc:101559	70	32.927	ENSSLDG00000000287	rab23	71	35.135
ENSSLDG00000019214	zgc:101559	74	38.150	ENSSLDG00000012116	rab11al	79	38.150
ENSSLDG00000019214	zgc:101559	65	34.641	ENSSLDG00000025169	rhebl1	82	34.641
ENSSLDG00000019214	zgc:101559	51	30.579	ENSSLDG00000015190	arl4aa	61	30.579
ENSSLDG00000019214	zgc:101559	73	38.596	ENSSLDG00000017771	rab5c	75	38.596
ENSSLDG00000019214	zgc:101559	67	45.283	ENSSLDG00000006360	RAB39B	74	45.283
ENSSLDG00000019214	zgc:101559	63	44.218	ENSSLDG00000021984	RAB15	68	44.218
ENSSLDG00000019214	zgc:101559	70	38.650	ENSSLDG00000009725	-	77	38.650
ENSSLDG00000019214	zgc:101559	73	40.351	ENSSLDG00000011069	rab5aa	77	40.351
ENSSLDG00000019214	zgc:101559	63	42.177	ENSSLDG00000023317	rab15	68	42.177
ENSSLDG00000019214	zgc:101559	71	39.521	ENSSLDG00000010503	rab14	75	39.521
ENSSLDG00000019214	zgc:101559	76	46.629	ENSSLDG00000022533	rab30	83	46.629
ENSSLDG00000019214	zgc:101559	65	33.974	ENSSLDG00000000773	rab9a	77	33.974
ENSSLDG00000019214	zgc:101559	71	35.465	ENSSLDG00000003489	rasl11a	66	35.465
ENSSLDG00000019214	zgc:101559	70	36.095	ENSSLDG00000024959	-	79	36.095
ENSSLDG00000019214	zgc:101559	70	36.310	ENSSLDG00000012391	RAB7A	79	36.310
ENSSLDG00000019214	zgc:101559	65	38.462	ENSSLDG00000009351	rab9b	76	38.462
ENSSLDG00000019214	zgc:101559	85	33.333	ENSSLDG00000012627	hrasb	97	33.333
ENSSLDG00000019214	zgc:101559	71	34.132	ENSSLDG00000022168	kras	90	34.637
ENSSLDG00000019214	zgc:101559	64	44.295	ENSSLDG00000022282	rab41	70	44.295
ENSSLDG00000019214	zgc:101559	71	39.521	ENSSLDG00000005718	-	75	39.521
ENSSLDG00000019214	zgc:101559	74	39.306	ENSSLDG00000005275	-	78	39.306
ENSSLDG00000019214	zgc:101559	56	43.846	ENSSLDG00000009573	rab34a	52	43.846
ENSSLDG00000019214	zgc:101559	70	42.683	ENSSLDG00000015823	-	80	42.683
ENSSLDG00000019214	zgc:101559	64	34.868	ENSSLDG00000004352	-	71	34.868
ENSSLDG00000019214	zgc:101559	78	39.691	ENSSLDG00000020438	rab22a	96	39.691
ENSSLDG00000019214	zgc:101559	77	62.778	ENSSLDG00000008584	rab33ba	81	62.778
ENSSLDG00000019214	zgc:101559	79	36.559	ENSSLDG00000012474	rab6bb	87	36.559
ENSSLDG00000019214	zgc:101559	71	31.515	ENSSLDG00000020918	RAB17	70	31.515
ENSSLDG00000019214	zgc:101559	74	38.728	ENSSLDG00000005221	rab11ba	78	38.728
ENSSLDG00000019214	zgc:101559	73	44.118	ENSSLDG00000003631	si:dkey-16l2.16	85	42.778
ENSSLDG00000019214	zgc:101559	77	44.751	ENSSLDG00000018942	rab1ab	84	44.751
ENSSLDG00000019214	zgc:101559	51	30.252	ENSSLDG00000011226	arl8a	61	30.252
ENSSLDG00000019214	zgc:101559	81	32.524	ENSSLDG00000009464	rab36	75	32.524
ENSSLDG00000019214	zgc:101559	69	39.130	ENSSLDG00000003264	rab6ba	76	39.130
ENSSLDG00000019214	zgc:101559	84	35.204	ENSSLDG00000006014	rab18b	93	35.204
ENSSLDG00000019214	zgc:101559	74	32.948	ENSSLDG00000021833	si:ch73-116o1.2	81	32.948
ENSSLDG00000019214	zgc:101559	65	35.294	ENSSLDG00000018681	rheb	82	35.294
ENSSLDG00000019214	zgc:101559	80	36.702	ENSSLDG00000020354	rab42a	82	36.702
ENSSLDG00000019214	zgc:101559	66	45.161	ENSSLDG00000009068	-	72	45.161
ENSSLDG00000019214	zgc:101559	77	38.251	ENSSLDG00000022239	rab12	74	38.251
ENSSLDG00000019214	zgc:101559	50	32.203	ENSSLDG00000005628	arl4d	58	32.203
ENSSLDG00000019214	zgc:101559	63	42.000	ENSSLDG00000002646	si:dkey-34d22.5	67	42.000
ENSSLDG00000019214	zgc:101559	63	40.136	ENSSLDG00000006977	rab18a	71	40.136
ENSSLDG00000019214	zgc:101559	77	45.304	ENSSLDG00000011757	-	84	45.304
ENSSLDG00000019214	zgc:101559	77	44.199	ENSSLDG00000012251	rab1ba	85	44.199
ENSSLDG00000019214	zgc:101559	65	41.026	ENSSLDG00000011597	si:dkey-13a21.4	75	41.026
ENSSLDG00000019214	zgc:101559	78	38.462	ENSSLDG00000009438	rab11a	84	38.462
ENSSLDG00000019214	zgc:101559	53	35.772	ENSSLDG00000014472	-	92	36.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019214	zgc:101559	100	88.889	ENSAPOG00000007503	zgc:101559	100	88.889	Acanthochromis_polyacanthus
ENSSLDG00000019214	zgc:101559	87	94.118	ENSACIG00000021459	zgc:101559	89	94.118	Amphilophus_citrinellus
ENSSLDG00000019214	zgc:101559	100	89.316	ENSAOCG00000024675	zgc:101559	100	89.316	Amphiprion_ocellaris
ENSSLDG00000019214	zgc:101559	100	89.316	ENSAPEG00000005176	zgc:101559	100	89.316	Amphiprion_percula
ENSSLDG00000019214	zgc:101559	100	88.034	ENSATEG00000007761	zgc:101559	100	88.034	Anabas_testudineus
ENSSLDG00000019214	zgc:101559	98	90.000	ENSACLG00000027006	zgc:101559	97	90.000	Astatotilapia_calliptera
ENSSLDG00000019214	zgc:101559	100	74.043	ENSAMXG00000040460	zgc:101559	94	74.043	Astyanax_mexicanus
ENSSLDG00000019214	zgc:101559	100	82.906	ENSCSEG00000006243	zgc:101559	100	82.906	Cynoglossus_semilaevis
ENSSLDG00000019214	zgc:101559	100	86.752	ENSCVAG00000019227	zgc:101559	100	86.752	Cyprinodon_variegatus
ENSSLDG00000019214	zgc:101559	100	74.894	ENSDARG00000003257	zgc:101559	100	74.894	Danio_rerio
ENSSLDG00000019214	zgc:101559	100	85.470	ENSFHEG00000011483	zgc:101559	100	85.470	Fundulus_heteroclitus
ENSSLDG00000019214	zgc:101559	91	81.604	ENSGMOG00000011665	zgc:101559	99	81.604	Gadus_morhua
ENSSLDG00000019214	zgc:101559	100	85.043	ENSGAFG00000021202	zgc:101559	100	85.043	Gambusia_affinis
ENSSLDG00000019214	zgc:101559	91	84.434	ENSGACG00000001725	zgc:101559	91	84.434	Gasterosteus_aculeatus
ENSSLDG00000019214	zgc:101559	100	90.598	ENSHBUG00000007827	zgc:101559	100	90.598	Haplochromis_burtoni
ENSSLDG00000019214	zgc:101559	100	77.119	ENSHCOG00000009133	zgc:101559	100	78.571	Hippocampus_comes
ENSSLDG00000019214	zgc:101559	100	71.368	ENSIPUG00000022394	zgc:101559	100	71.368	Ictalurus_punctatus
ENSSLDG00000019214	zgc:101559	100	81.702	ENSKMAG00000002862	zgc:101559	100	81.702	Kryptolebias_marmoratus
ENSSLDG00000019214	zgc:101559	100	88.889	ENSLBEG00000025798	zgc:101559	100	88.889	Labrus_bergylta
ENSSLDG00000019214	zgc:101559	88	65.049	ENSLACG00000011557	zgc:101559	89	65.049	Latimeria_chalumnae
ENSSLDG00000019214	zgc:101559	100	70.085	ENSLOCG00000005904	zgc:101559	99	70.085	Lepisosteus_oculatus
ENSSLDG00000019214	zgc:101559	100	90.598	ENSMAMG00000017431	zgc:101559	100	90.598	Mastacembelus_armatus
ENSSLDG00000019214	zgc:101559	100	90.598	ENSMZEG00005021778	zgc:101559	100	90.598	Maylandia_zebra
ENSSLDG00000019214	zgc:101559	100	84.615	ENSMMOG00000019779	zgc:101559	100	84.615	Mola_mola
ENSSLDG00000019214	zgc:101559	100	87.179	ENSMALG00000003712	zgc:101559	100	87.179	Monopterus_albus
ENSSLDG00000019214	zgc:101559	100	89.744	ENSNBRG00000002684	zgc:101559	100	89.744	Neolamprologus_brichardi
ENSSLDG00000019214	zgc:101559	100	90.598	ENSONIG00000006715	-	100	90.598	Oreochromis_niloticus
ENSSLDG00000019214	zgc:101559	100	84.188	ENSORLG00000030642	zgc:101559	100	84.188	Oryzias_latipes
ENSSLDG00000019214	zgc:101559	100	83.333	ENSORLG00020012685	zgc:101559	100	83.333	Oryzias_latipes_hni
ENSSLDG00000019214	zgc:101559	100	83.761	ENSORLG00015016047	zgc:101559	100	83.761	Oryzias_latipes_hsok
ENSSLDG00000019214	zgc:101559	100	86.325	ENSOMEG00000013128	zgc:101559	100	86.325	Oryzias_melastigma
ENSSLDG00000019214	zgc:101559	96	73.661	ENSPKIG00000013397	zgc:101559	94	73.661	Paramormyrops_kingsleyae
ENSSLDG00000019214	zgc:101559	100	87.179	ENSPFOG00000009101	-	100	87.179	Poecilia_formosa
ENSSLDG00000019214	zgc:101559	100	87.179	ENSPLAG00000020627	zgc:101559	100	87.179	Poecilia_latipinna
ENSSLDG00000019214	zgc:101559	100	87.179	ENSPMEG00000010152	zgc:101559	100	87.179	Poecilia_mexicana
ENSSLDG00000019214	zgc:101559	100	86.752	ENSPREG00000007017	zgc:101559	100	86.752	Poecilia_reticulata
ENSSLDG00000019214	zgc:101559	100	90.598	ENSPNYG00000012922	zgc:101559	100	90.598	Pundamilia_nyererei
ENSSLDG00000019214	zgc:101559	100	74.894	ENSPNAG00000017856	zgc:101559	100	74.894	Pygocentrus_nattereri
ENSSLDG00000019214	zgc:101559	99	70.386	ENSSFOG00015006175	zgc:101559	100	70.386	Scleropages_formosus
ENSSLDG00000019214	zgc:101559	99	87.554	ENSSMAG00000002229	zgc:101559	99	87.554	Scophthalmus_maximus
ENSSLDG00000019214	zgc:101559	100	99.145	ENSSDUG00000008151	zgc:101559	100	99.145	Seriola_dumerili
ENSSLDG00000019214	zgc:101559	100	90.598	ENSSPAG00000006404	zgc:101559	100	90.598	Stegastes_partitus
ENSSLDG00000019214	zgc:101559	100	83.333	ENSTRUG00000009903	zgc:101559	100	83.333	Takifugu_rubripes
ENSSLDG00000019214	zgc:101559	93	83.410	ENSTNIG00000015000	zgc:101559	92	83.410	Tetraodon_nigroviridis
ENSSLDG00000019214	zgc:101559	100	86.752	ENSXCOG00000018683	zgc:101559	100	86.752	Xiphophorus_couchianus
ENSSLDG00000019214	zgc:101559	100	86.752	ENSXMAG00000011171	zgc:101559	100	86.752	Xiphophorus_maculatus