EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000019342 (Gene tree)
Gene ID: -
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 4069 bases
Position: chrPEQF01098960.1:378434-382502
Accession: 111659507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000024896	TruB_N	PF01509.18	4.5e-22	1	1
ENSSLDP00000024896	PUA	PF01472.20	1.2e-16	1	1
ENSSLDP00000024896	DKCLD	PF08068.12	3.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025679	-	1443	XM_023412488	ENSSLDP00000024896	480 (aa)	XP_023268256	-

Gene Model

Click here to download ENSSLDG00000019342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019342	dkc1	92	80.813	ENSG00000130826	DKC1	99	87.864	Homo_sapiens
ENSSLDG00000019342	dkc1	86	90.465	ENSAPOG00000007799	dkc1	93	87.021	Acanthochromis_polyacanthus
ENSSLDG00000019342	dkc1	89	82.477	ENSAMEG00000002776	DKC1	91	78.158	Ailuropoda_melanoleuca
ENSSLDG00000019342	dkc1	98	89.362	ENSACIG00000022614	dkc1	93	91.314	Amphilophus_citrinellus
ENSSLDG00000019342	dkc1	89	90.766	ENSAOCG00000013159	dkc1	87	91.784	Amphiprion_ocellaris
ENSSLDG00000019342	dkc1	89	90.766	ENSAPEG00000002284	dkc1	91	90.359	Amphiprion_percula
ENSSLDG00000019342	dkc1	87	90.293	ENSATEG00000013682	dkc1	93	87.212	Anabas_testudineus
ENSSLDG00000019342	dkc1	95	79.515	ENSACAG00000015600	DKC1	68	88.041	Anolis_carolinensis
ENSSLDG00000019342	dkc1	90	82.326	ENSANAG00000022732	DKC1	90	78.091	Aotus_nancymaae
ENSSLDG00000019342	dkc1	87	92.548	ENSACLG00000015605	dkc1	95	84.764	Astatotilapia_calliptera
ENSSLDG00000019342	dkc1	91	86.270	ENSAMXG00000017108	dkc1	94	83.087	Astyanax_mexicanus
ENSSLDG00000019342	dkc1	90	81.755	ENSBTAG00000013045	DKC1	92	77.070	Bos_taurus
ENSSLDG00000019342	dkc1	84	65.261	WBGene00010478	K01G5.5	91	64.604	Caenorhabditis_elegans
ENSSLDG00000019342	dkc1	92	80.995	ENSCJAG00000004210	DKC1	76	87.532	Callithrix_jacchus
ENSSLDG00000019342	dkc1	89	73.210	ENSCAFG00000009311	-	77	77.608	Canis_familiaris
ENSSLDG00000019342	dkc1	89	82.588	ENSCAFG00000019620	-	76	87.023	Canis_familiaris
ENSSLDG00000019342	dkc1	89	82.588	ENSCAFG00020008918	-	76	87.023	Canis_lupus_dingo
ENSSLDG00000019342	dkc1	88	73.176	ENSCAFG00020009379	-	74	76.845	Canis_lupus_dingo
ENSSLDG00000019342	dkc1	90	81.986	ENSCHIG00000017392	DKC1	90	78.947	Capra_hircus
ENSSLDG00000019342	dkc1	92	80.134	ENSTSYG00000007681	DKC1	78	84.915	Carlito_syrichta
ENSSLDG00000019342	dkc1	82	83.417	ENSCAPG00000003342	DKC1	86	86.772	Cavia_aperea
ENSSLDG00000019342	dkc1	93	80.225	ENSCPOG00000008825	DKC1	91	77.516	Cavia_porcellus
ENSSLDG00000019342	dkc1	92	71.719	ENSCCAG00000027418	DKC1	74	77.099	Cebus_capucinus
ENSSLDG00000019342	dkc1	92	80.587	ENSCATG00000033602	DKC1	91	77.399	Cercocebus_atys
ENSSLDG00000019342	dkc1	89	82.558	ENSCLAG00000000720	DKC1	92	78.112	Chinchilla_lanigera
ENSSLDG00000019342	dkc1	92	80.587	ENSCSAG00000006706	DKC1	91	77.399	Chlorocebus_sabaeus
ENSSLDG00000019342	dkc1	83	86.935	ENSCPBG00000005858	DKC1	84	88.041	Chrysemys_picta_bellii
ENSSLDG00000019342	dkc1	86	77.670	ENSCING00000004599	-	76	79.949	Ciona_intestinalis
ENSSLDG00000019342	dkc1	82	78.987	ENSCSAVG00000010047	-	88	78.987	Ciona_savignyi
ENSSLDG00000019342	dkc1	92	80.587	ENSCANG00000027987	DKC1	91	77.399	Colobus_angolensis_palliatus
ENSSLDG00000019342	dkc1	92	80.090	ENSCGRG00001014574	-	77	87.532	Cricetulus_griseus_chok1gshd
ENSSLDG00000019342	dkc1	80	66.321	ENSCGRG00001016789	-	78	67.575	Cricetulus_griseus_chok1gshd
ENSSLDG00000019342	dkc1	80	66.321	ENSCGRG00000014809	-	77	67.575	Cricetulus_griseus_crigri
ENSSLDG00000019342	dkc1	92	80.090	ENSCGRG00000016075	-	77	87.532	Cricetulus_griseus_crigri
ENSSLDG00000019342	dkc1	95	86.422	ENSCSEG00000012633	dkc1	96	86.344	Cynoglossus_semilaevis
ENSSLDG00000019342	dkc1	88	88.991	ENSCVAG00000010155	dkc1	89	88.571	Cyprinodon_variegatus
ENSSLDG00000019342	dkc1	83	92.965	ENSDARG00000016484	dkc1	92	83.974	Danio_rerio
ENSSLDG00000019342	dkc1	92	81.166	ENSDNOG00000004218	DKC1	91	78.158	Dasypus_novemcinctus
ENSSLDG00000019342	dkc1	58	72.760	ENSDORG00000013566	-	90	73.723	Dipodomys_ordii
ENSSLDG00000019342	dkc1	93	66.592	FBgn0259937	Nop60B	87	68.687	Drosophila_melanogaster
ENSSLDG00000019342	dkc1	83	85.427	ENSETEG00000016095	DKC1	80	86.005	Echinops_telfairi
ENSSLDG00000019342	dkc1	69	78.419	ENSEBUG00000015962	dkc1	98	82.131	Eptatretus_burgeri
ENSSLDG00000019342	dkc1	96	78.696	ENSEASG00005007484	DKC1	86	78.022	Equus_asinus_asinus
ENSSLDG00000019342	dkc1	96	78.696	ENSECAG00000023524	DKC1	86	78.022	Equus_caballus
ENSSLDG00000019342	dkc1	87	81.818	ENSEEUG00000003323	DKC1	95	84.158	Erinaceus_europaeus
ENSSLDG00000019342	dkc1	90	88.787	ENSELUG00000014538	dkc1	90	88.539	Esox_lucius
ENSSLDG00000019342	dkc1	86	84.783	ENSFCAG00000006577	DKC1	91	77.730	Felis_catus
ENSSLDG00000019342	dkc1	95	78.742	ENSFALG00000011496	DKC1	90	78.692	Ficedula_albicollis
ENSSLDG00000019342	dkc1	90	81.293	ENSFDAG00000002516	DKC1	92	77.564	Fukomys_damarensis
ENSSLDG00000019342	dkc1	92	86.404	ENSFHEG00000004627	dkc1	93	85.345	Fundulus_heteroclitus
ENSSLDG00000019342	dkc1	81	89.258	ENSGMOG00000017277	dkc1	100	89.258	Gadus_morhua
ENSSLDG00000019342	dkc1	90	83.641	ENSGALG00000005054	DKC1	90	80.430	Gallus_gallus
ENSSLDG00000019342	dkc1	87	89.815	ENSGAFG00000011486	dkc1	80	87.716	Gambusia_affinis
ENSSLDG00000019342	dkc1	86	92.754	ENSGACG00000004373	dkc1	96	94.833	Gasterosteus_aculeatus
ENSSLDG00000019342	dkc1	83	87.879	ENSGAGG00000011330	DKC1	76	88.550	Gopherus_agassizii
ENSSLDG00000019342	dkc1	92	80.813	ENSGGOG00000001045	DKC1	91	77.612	Gorilla_gorilla
ENSSLDG00000019342	dkc1	95	87.315	ENSHBUG00000012436	dkc1	91	87.939	Haplochromis_burtoni
ENSSLDG00000019342	dkc1	89	82.243	ENSHGLG00000000649	DKC1	90	77.682	Heterocephalus_glaber_female
ENSSLDG00000019342	dkc1	89	82.243	ENSHGLG00100001153	DKC1	91	77.682	Heterocephalus_glaber_male
ENSSLDG00000019342	dkc1	93	84.335	ENSHCOG00000021099	dkc1	81	90.488	Hippocampus_comes
ENSSLDG00000019342	dkc1	92	84.389	ENSIPUG00000010309	dkc1	91	82.664	Ictalurus_punctatus
ENSSLDG00000019342	dkc1	92	79.821	ENSSTOG00000001074	-	81	87.277	Ictidomys_tridecemlineatus
ENSSLDG00000019342	dkc1	92	68.597	ENSSTOG00000011904	-	72	75.064	Ictidomys_tridecemlineatus
ENSSLDG00000019342	dkc1	92	71.715	ENSSTOG00000020149	-	77	79.135	Ictidomys_tridecemlineatus
ENSSLDG00000019342	dkc1	58	73.646	ENSJJAG00000010086	-	90	73.723	Jaculus_jaculus
ENSSLDG00000019342	dkc1	86	88.993	ENSKMAG00000008010	dkc1	86	88.941	Kryptolebias_marmoratus
ENSSLDG00000019342	dkc1	86	89.252	ENSLBEG00000019122	dkc1	88	89.486	Labrus_bergylta
ENSSLDG00000019342	dkc1	92	82.955	ENSLACG00000014025	DKC1	90	88.550	Latimeria_chalumnae
ENSSLDG00000019342	dkc1	88	85.714	ENSLOCG00000013713	dkc1	95	84.835	Lepisosteus_oculatus
ENSSLDG00000019342	dkc1	89	82.326	ENSLAFG00000000221	DKC1	92	76.471	Loxodonta_africana
ENSSLDG00000019342	dkc1	92	80.361	ENSMFAG00000032398	DKC1	81	75.620	Macaca_fascicularis
ENSSLDG00000019342	dkc1	92	80.587	ENSMMUG00000005768	DKC1	91	77.399	Macaca_mulatta
ENSSLDG00000019342	dkc1	92	80.587	ENSMNEG00000034503	DKC1	91	77.399	Macaca_nemestrina
ENSSLDG00000019342	dkc1	92	80.587	ENSMLEG00000034422	DKC1	91	77.399	Mandrillus_leucophaeus
ENSSLDG00000019342	dkc1	84	96.782	ENSMAMG00000005427	dkc1	90	96.782	Mastacembelus_armatus
ENSSLDG00000019342	dkc1	95	87.526	ENSMZEG00005014503	dkc1	91	88.158	Maylandia_zebra
ENSSLDG00000019342	dkc1	83	84.596	ENSMGAG00000009238	DKC1	94	80.831	Meleagris_gallopavo
ENSSLDG00000019342	dkc1	58	72.043	ENSMAUG00000016454	-	90	72.993	Mesocricetus_auratus
ENSSLDG00000019342	dkc1	85	72.616	ENSMICG00000002818	-	99	76.986	Microcebus_murinus
ENSSLDG00000019342	dkc1	92	79.596	ENSMICG00000038751	-	78	86.260	Microcebus_murinus
ENSSLDG00000019342	dkc1	58	69.534	ENSMOCG00000001169	-	90	70.438	Microtus_ochrogaster
ENSSLDG00000019342	dkc1	88	91.924	ENSMMOG00000020348	dkc1	87	92.768	Mola_mola
ENSSLDG00000019342	dkc1	92	81.490	ENSMODG00000009243	DKC1	68	88.041	Monodelphis_domestica
ENSSLDG00000019342	dkc1	97	87.037	ENSMALG00000009454	dkc1	91	86.724	Monopterus_albus
ENSSLDG00000019342	dkc1	83	74.752	MGP_CAROLIEiJ_G0033191	Dkc1	84	84.553	Mus_caroli
ENSSLDG00000019342	dkc1	83	86.181	ENSMUSG00000031403	Dkc1	77	87.023	Mus_musculus
ENSSLDG00000019342	dkc1	92	79.412	MGP_PahariEiJ_G0031735	Dkc1	77	87.023	Mus_pahari
ENSSLDG00000019342	dkc1	83	86.181	MGP_SPRETEiJ_G0034351	Dkc1	77	87.023	Mus_spretus
ENSSLDG00000019342	dkc1	92	78.855	ENSMPUG00000016136	DKC1	73	86.768	Mustela_putorius_furo
ENSSLDG00000019342	dkc1	89	74.342	ENSMLUG00000011918	DKC1	75	83.461	Myotis_lucifugus
ENSSLDG00000019342	dkc1	58	73.118	ENSNGAG00000015724	-	90	73.723	Nannospalax_galili
ENSSLDG00000019342	dkc1	87	93.269	ENSNBRG00000005638	dkc1	80	94.670	Neolamprologus_brichardi
ENSSLDG00000019342	dkc1	92	80.813	ENSNLEG00000014323	DKC1	91	77.399	Nomascus_leucogenys
ENSSLDG00000019342	dkc1	83	83.417	ENSMEUG00000001066	DKC1	86	84.224	Notamacropus_eugenii
ENSSLDG00000019342	dkc1	73	79.598	ENSOPRG00000005248	DKC1	69	80.000	Ochotona_princeps
ENSSLDG00000019342	dkc1	85	87.010	ENSODEG00000011816	-	87	81.778	Octodon_degus
ENSSLDG00000019342	dkc1	58	72.760	ENSODEG00000000549	-	90	73.358	Octodon_degus
ENSSLDG00000019342	dkc1	89	89.640	ENSONIG00000013889	dkc1	91	88.377	Oreochromis_niloticus
ENSSLDG00000019342	dkc1	61	60.912	ENSOANG00000022295	-	75	67.164	Ornithorhynchus_anatinus
ENSSLDG00000019342	dkc1	90	84.455	ENSOANG00000008713	-	97	79.618	Ornithorhynchus_anatinus
ENSSLDG00000019342	dkc1	92	79.773	ENSOCUG00000012646	DKC1	77	87.277	Oryctolagus_cuniculus
ENSSLDG00000019342	dkc1	82	94.133	ENSORLG00000018748	dkc1	78	93.655	Oryzias_latipes
ENSSLDG00000019342	dkc1	83	92.714	ENSOMEG00000005786	dkc1	81	92.373	Oryzias_melastigma
ENSSLDG00000019342	dkc1	83	86.935	ENSOGAG00000003399	DKC1	75	87.532	Otolemur_garnettii
ENSSLDG00000019342	dkc1	90	81.986	ENSOARG00000003047	DKC1	91	77.849	Ovis_aries
ENSSLDG00000019342	dkc1	90	82.326	ENSPPAG00000023820	DKC1	85	80.778	Pan_paniscus
ENSSLDG00000019342	dkc1	86	84.783	ENSPPRG00000009104	DKC1	91	77.730	Panthera_pardus
ENSSLDG00000019342	dkc1	89	83.568	ENSPTIG00000017469	DKC1	82	85.891	Panthera_tigris_altaica
ENSSLDG00000019342	dkc1	92	80.813	ENSPTRG00000043416	-	80	77.167	Pan_troglodytes
ENSSLDG00000019342	dkc1	92	80.813	ENSPTRG00000022449	DKC1	91	77.612	Pan_troglodytes
ENSSLDG00000019342	dkc1	92	80.587	ENSPANG00000011978	DKC1	91	77.399	Papio_anubis
ENSSLDG00000019342	dkc1	83	92.424	ENSPKIG00000008443	dkc1	83	92.386	Paramormyrops_kingsleyae
ENSSLDG00000019342	dkc1	75	89.944	ENSPSIG00000013765	DKC1	86	89.944	Pelodiscus_sinensis
ENSSLDG00000019342	dkc1	83	87.406	ENSPMGG00000004097	dkc1	72	87.817	Periophthalmus_magnuspinnatus
ENSSLDG00000019342	dkc1	68	86.207	ENSPEMG00000013348	Dkc1	73	86.932	Peromyscus_maniculatus_bairdii
ENSSLDG00000019342	dkc1	89	83.333	ENSPCIG00000016706	DKC1	66	88.295	Phascolarctos_cinereus
ENSSLDG00000019342	dkc1	87	90.300	ENSPFOG00000018653	dkc1	93	87.716	Poecilia_formosa
ENSSLDG00000019342	dkc1	87	90.300	ENSPLAG00000003272	dkc1	84	87.716	Poecilia_latipinna
ENSSLDG00000019342	dkc1	87	90.300	ENSPMEG00000010413	dkc1	93	87.716	Poecilia_mexicana
ENSSLDG00000019342	dkc1	87	90.300	ENSPREG00000004100	dkc1	95	84.091	Poecilia_reticulata
ENSSLDG00000019342	dkc1	92	80.813	ENSPPYG00000020892	DKC1	95	75.620	Pongo_abelii
ENSSLDG00000019342	dkc1	75	87.569	ENSPCAG00000015034	DKC1	71	87.569	Procavia_capensis
ENSSLDG00000019342	dkc1	92	80.225	ENSPCOG00000026874	DKC1	91	77.399	Propithecus_coquereli
ENSSLDG00000019342	dkc1	86	81.206	ENSPVAG00000009222	DKC1	91	78.289	Pteropus_vampyrus
ENSSLDG00000019342	dkc1	92	87.892	ENSPNYG00000020063	dkc1	93	85.897	Pundamilia_nyererei
ENSSLDG00000019342	dkc1	92	84.389	ENSPNAG00000005780	dkc1	94	81.607	Pygocentrus_nattereri
ENSSLDG00000019342	dkc1	92	76.072	ENSRNOG00000055562	Dkc1	91	74.090	Rattus_norvegicus
ENSSLDG00000019342	dkc1	92	80.587	ENSRBIG00000028457	DKC1	81	75.413	Rhinopithecus_bieti
ENSSLDG00000019342	dkc1	92	80.587	ENSRROG00000044780	DKC1	91	77.399	Rhinopithecus_roxellana
ENSSLDG00000019342	dkc1	81	70.844	YLR175W	-	79	71.802	Saccharomyces_cerevisiae
ENSSLDG00000019342	dkc1	92	80.909	ENSSBOG00000033746	DKC1	91	77.612	Saimiri_boliviensis_boliviensis
ENSSLDG00000019342	dkc1	92	80.761	ENSSHAG00000002463	DKC1	83	88.295	Sarcophilus_harrisii
ENSSLDG00000019342	dkc1	90	83.956	ENSSFOG00015009585	dkc1	93	81.818	Scleropages_formosus
ENSSLDG00000019342	dkc1	85	93.659	ENSSMAG00000002552	dkc1	89	91.800	Scophthalmus_maximus
ENSSLDG00000019342	dkc1	97	95.833	ENSSDUG00000009963	dkc1	96	95.833	Seriola_dumerili
ENSSLDG00000019342	dkc1	83	82.412	ENSSARG00000001822	DKC1	82	80.685	Sorex_araneus
ENSSLDG00000019342	dkc1	83	87.121	ENSSPUG00000018907	DKC1	75	87.532	Sphenodon_punctatus
ENSSLDG00000019342	dkc1	86	92.523	ENSSPAG00000002585	dkc1	86	91.131	Stegastes_partitus
ENSSLDG00000019342	dkc1	83	86.717	ENSSSCG00000012823	DKC1	85	84.841	Sus_scrofa
ENSSLDG00000019342	dkc1	84	84.577	ENSTGUG00000006781	DKC1	95	80.866	Taeniopygia_guttata
ENSSLDG00000019342	dkc1	94	86.022	ENSTRUG00000004413	dkc1	93	86.853	Takifugu_rubripes
ENSSLDG00000019342	dkc1	86	70.495	ENSTNIG00000002582	dkc1	86	70.909	Tetraodon_nigroviridis
ENSSLDG00000019342	dkc1	63	80.066	ENSTBEG00000011262	DKC1	93	74.780	Tupaia_belangeri
ENSSLDG00000019342	dkc1	58	87.365	ENSTTRG00000008089	DKC1	55	87.365	Tursiops_truncatus
ENSSLDG00000019342	dkc1	96	78.710	ENSUAMG00000022721	DKC1	86	85.330	Ursus_americanus
ENSSLDG00000019342	dkc1	96	78.280	ENSUMAG00000016899	DKC1	93	88.391	Ursus_maritimus
ENSSLDG00000019342	dkc1	83	71.970	ENSVVUG00000021671	-	72	72.265	Vulpes_vulpes
ENSSLDG00000019342	dkc1	89	80.645	ENSVVUG00000020734	-	69	85.500	Vulpes_vulpes
ENSSLDG00000019342	dkc1	84	87.841	ENSXETG00000032517	DKC1	78	89.822	Xenopus_tropicalis
ENSSLDG00000019342	dkc1	88	89.245	ENSXCOG00000005498	dkc1	98	88.596	Xiphophorus_couchianus
ENSSLDG00000019342	dkc1	87	89.195	ENSXMAG00000004919	dkc1	91	88.571	Xiphophorus_maculatus