EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000019458 (Gene tree)
Gene ID: -
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 4350 bases
Position: chrPEQF01099344.1:89106-93455
Accession: 111671047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000024999	RtcB	PF01139.17	4.6e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025785	-	1792	XM_023428036	ENSSLDP00000024999	505 (aa)	XP_023283804	UPI000C6F94B1

Gene Model

Click here to download ENSSLDG00000019458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019458	rtcb	100	93.861	ENSG00000100220	RTCB	100	93.861	Homo_sapiens
ENSSLDG00000019458	rtcb	100	97.030	ENSAPOG00000006040	rtcb	100	97.030	Acanthochromis_polyacanthus
ENSSLDG00000019458	rtcb	100	93.861	ENSAMEG00000016152	RTCB	100	93.861	Ailuropoda_melanoleuca
ENSSLDG00000019458	rtcb	100	91.683	ENSACIG00000009083	rtcb	100	91.683	Amphilophus_citrinellus
ENSSLDG00000019458	rtcb	100	97.228	ENSAOCG00000005662	rtcb	100	97.609	Amphiprion_ocellaris
ENSSLDG00000019458	rtcb	100	97.228	ENSAPEG00000024701	rtcb	100	97.228	Amphiprion_percula
ENSSLDG00000019458	rtcb	96	92.402	ENSAPEG00000024653	rtcb	100	92.402	Amphiprion_percula
ENSSLDG00000019458	rtcb	100	97.426	ENSATEG00000000618	rtcb	100	97.426	Anabas_testudineus
ENSSLDG00000019458	rtcb	100	90.751	ENSACAG00000014817	RTCB	100	90.751	Anolis_carolinensis
ENSSLDG00000019458	rtcb	100	78.218	ENSANAG00000018191	-	91	78.218	Aotus_nancymaae
ENSSLDG00000019458	rtcb	72	97.222	ENSANAG00000023724	-	86	97.222	Aotus_nancymaae
ENSSLDG00000019458	rtcb	100	94.257	ENSACLG00000008367	rtcb	100	95.000	Astatotilapia_calliptera
ENSSLDG00000019458	rtcb	100	95.248	ENSAMXG00000042320	rtcb	100	95.248	Astyanax_mexicanus
ENSSLDG00000019458	rtcb	100	94.257	ENSBTAG00000011070	RTCB	100	94.257	Bos_taurus
ENSSLDG00000019458	rtcb	100	73.267	WBGene00008877	rtcb-1	100	73.267	Caenorhabditis_elegans
ENSSLDG00000019458	rtcb	100	93.663	ENSCJAG00000006128	RTCB	100	93.663	Callithrix_jacchus
ENSSLDG00000019458	rtcb	100	89.703	ENSCAFG00000010789	-	100	89.703	Canis_familiaris
ENSSLDG00000019458	rtcb	100	93.861	ENSCAFG00000001785	RTCB	100	93.861	Canis_familiaris
ENSSLDG00000019458	rtcb	100	93.861	ENSCAFG00020004890	-	100	93.861	Canis_lupus_dingo
ENSSLDG00000019458	rtcb	87	89.773	ENSCAFG00020018953	-	99	89.773	Canis_lupus_dingo
ENSSLDG00000019458	rtcb	100	94.059	ENSCHIG00000027009	-	100	94.059	Capra_hircus
ENSSLDG00000019458	rtcb	100	93.663	ENSTSYG00000012320	RTCB	100	93.663	Carlito_syrichta
ENSSLDG00000019458	rtcb	94	93.711	ENSCAPG00000011647	RTCB	96	93.711	Cavia_aperea
ENSSLDG00000019458	rtcb	100	93.663	ENSCCAG00000000618	RTCB	100	93.663	Cebus_capucinus
ENSSLDG00000019458	rtcb	100	93.861	ENSCATG00000033424	RTCB	100	93.861	Cercocebus_atys
ENSSLDG00000019458	rtcb	100	93.861	ENSCLAG00000007997	RTCB	100	93.861	Chinchilla_lanigera
ENSSLDG00000019458	rtcb	100	93.663	ENSCSAG00000008351	RTCB	100	93.663	Chlorocebus_sabaeus
ENSSLDG00000019458	rtcb	100	80.396	ENSCHOG00000009123	RTCB	100	80.396	Choloepus_hoffmanni
ENSSLDG00000019458	rtcb	100	93.069	ENSCPBG00000023184	RTCB	100	93.069	Chrysemys_picta_bellii
ENSSLDG00000019458	rtcb	100	82.376	ENSCING00000003830	-	100	82.376	Ciona_intestinalis
ENSSLDG00000019458	rtcb	100	82.574	ENSCSAVG00000008124	-	100	82.005	Ciona_savignyi
ENSSLDG00000019458	rtcb	100	90.099	ENSCANG00000001891	RTCB	100	90.099	Colobus_angolensis_palliatus
ENSSLDG00000019458	rtcb	100	93.861	ENSCGRG00001011173	Rtcb	100	93.861	Cricetulus_griseus_chok1gshd
ENSSLDG00000019458	rtcb	93	94.681	ENSCGRG00000009587	-	96	94.681	Cricetulus_griseus_crigri
ENSSLDG00000019458	rtcb	100	97.426	ENSCSEG00000003986	rtcb	100	97.426	Cynoglossus_semilaevis
ENSSLDG00000019458	rtcb	82	94.952	ENSCVAG00000000569	rtcb	95	94.952	Cyprinodon_variegatus
ENSSLDG00000019458	rtcb	100	95.842	ENSDARG00000101047	rtcb	100	95.842	Danio_rerio
ENSSLDG00000019458	rtcb	80	89.681	ENSDNOG00000012425	RTCB	99	89.681	Dasypus_novemcinctus
ENSSLDG00000019458	rtcb	100	93.861	ENSDORG00000010855	Rtcb	100	93.861	Dipodomys_ordii
ENSSLDG00000019458	rtcb	99	84.692	FBgn0032781	RtcB	99	84.692	Drosophila_melanogaster
ENSSLDG00000019458	rtcb	100	87.921	ENSETEG00000001988	RTCB	100	87.921	Echinops_telfairi
ENSSLDG00000019458	rtcb	100	85.149	ENSEBUG00000014235	rtcb	100	85.149	Eptatretus_burgeri
ENSSLDG00000019458	rtcb	100	94.059	ENSEASG00005019059	RTCB	100	94.059	Equus_asinus_asinus
ENSSLDG00000019458	rtcb	100	94.059	ENSECAG00000023998	RTCB	100	94.059	Equus_caballus
ENSSLDG00000019458	rtcb	89	85.235	ENSEEUG00000006251	RTCB	100	85.235	Erinaceus_europaeus
ENSSLDG00000019458	rtcb	100	82.987	ENSELUG00000009275	rtcb	100	82.987	Esox_lucius
ENSSLDG00000019458	rtcb	100	93.861	ENSFCAG00000026480	RTCB	100	93.861	Felis_catus
ENSSLDG00000019458	rtcb	100	94.455	ENSFALG00000013334	RTCB	100	94.455	Ficedula_albicollis
ENSSLDG00000019458	rtcb	100	93.663	ENSFDAG00000018150	RTCB	100	93.663	Fukomys_damarensis
ENSSLDG00000019458	rtcb	100	96.238	ENSFHEG00000009595	rtcb	100	96.238	Fundulus_heteroclitus
ENSSLDG00000019458	rtcb	100	92.871	ENSGMOG00000018882	rtcb	100	92.871	Gadus_morhua
ENSSLDG00000019458	rtcb	100	94.059	ENSGALG00000012611	RTCB	100	94.059	Gallus_gallus
ENSSLDG00000019458	rtcb	100	95.842	ENSGAFG00000004198	rtcb	100	95.842	Gambusia_affinis
ENSSLDG00000019458	rtcb	100	96.040	ENSGACG00000000586	rtcb	100	96.040	Gasterosteus_aculeatus
ENSSLDG00000019458	rtcb	93	92.128	ENSGAGG00000019133	RTCB	98	92.128	Gopherus_agassizii
ENSSLDG00000019458	rtcb	100	93.861	ENSGGOG00000011402	RTCB	100	93.861	Gorilla_gorilla
ENSSLDG00000019458	rtcb	100	94.257	ENSHBUG00000020571	rtcb	100	94.257	Haplochromis_burtoni
ENSSLDG00000019458	rtcb	93	67.377	ENSHGLG00000001066	-	99	67.377	Heterocephalus_glaber_female
ENSSLDG00000019458	rtcb	100	93.663	ENSHGLG00000004492	RTCB	100	93.663	Heterocephalus_glaber_female
ENSSLDG00000019458	rtcb	100	93.663	ENSHGLG00100008965	RTCB	100	93.663	Heterocephalus_glaber_male
ENSSLDG00000019458	rtcb	100	93.886	ENSHCOG00000006450	rtcb	100	93.886	Hippocampus_comes
ENSSLDG00000019458	rtcb	100	94.455	ENSIPUG00000015443	rtcb	100	94.455	Ictalurus_punctatus
ENSSLDG00000019458	rtcb	100	93.663	ENSSTOG00000003878	RTCB	100	93.663	Ictidomys_tridecemlineatus
ENSSLDG00000019458	rtcb	100	94.059	ENSJJAG00000010667	Rtcb	100	94.059	Jaculus_jaculus
ENSSLDG00000019458	rtcb	100	96.436	ENSKMAG00000013178	rtcb	100	96.436	Kryptolebias_marmoratus
ENSSLDG00000019458	rtcb	100	97.030	ENSLBEG00000010566	RTCB	100	97.030	Labrus_bergylta
ENSSLDG00000019458	rtcb	100	96.040	ENSLBEG00000000214	rtcb	100	96.040	Labrus_bergylta
ENSSLDG00000019458	rtcb	100	94.059	ENSLACG00000013033	RTCB	100	94.059	Latimeria_chalumnae
ENSSLDG00000019458	rtcb	100	95.644	ENSLOCG00000016515	rtcb	99	95.644	Lepisosteus_oculatus
ENSSLDG00000019458	rtcb	100	93.267	ENSLAFG00000002082	RTCB	100	93.267	Loxodonta_africana
ENSSLDG00000019458	rtcb	100	93.663	ENSMFAG00000034419	RTCB	100	93.663	Macaca_fascicularis
ENSSLDG00000019458	rtcb	100	93.663	ENSMMUG00000006720	RTCB	100	93.663	Macaca_mulatta
ENSSLDG00000019458	rtcb	100	93.663	ENSMNEG00000040669	RTCB	100	93.663	Macaca_nemestrina
ENSSLDG00000019458	rtcb	100	93.861	ENSMLEG00000040505	RTCB	100	93.861	Mandrillus_leucophaeus
ENSSLDG00000019458	rtcb	100	97.624	ENSMAMG00000020676	rtcb	100	97.624	Mastacembelus_armatus
ENSSLDG00000019458	rtcb	100	94.257	ENSMZEG00005018942	rtcb	100	94.257	Maylandia_zebra
ENSSLDG00000019458	rtcb	100	93.688	ENSMGAG00000012805	RTCB	100	93.688	Meleagris_gallopavo
ENSSLDG00000019458	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSSLDG00000019458	rtcb	100	74.851	ENSMICG00000036677	-	100	74.851	Microcebus_murinus
ENSSLDG00000019458	rtcb	100	93.663	ENSMICG00000013303	-	100	93.663	Microcebus_murinus
ENSSLDG00000019458	rtcb	100	94.257	ENSMOCG00000002440	Rtcb	100	94.257	Microtus_ochrogaster
ENSSLDG00000019458	rtcb	100	96.634	ENSMMOG00000005987	rtcb	100	96.634	Mola_mola
ENSSLDG00000019458	rtcb	100	94.059	ENSMODG00000001414	RTCB	100	94.059	Monodelphis_domestica
ENSSLDG00000019458	rtcb	100	97.228	ENSMALG00000007603	rtcb	100	97.228	Monopterus_albus
ENSSLDG00000019458	rtcb	100	93.861	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.861	Mus_caroli
ENSSLDG00000019458	rtcb	100	93.861	ENSMUSG00000001783	Rtcb	100	93.861	Mus_musculus
ENSSLDG00000019458	rtcb	100	93.861	MGP_PahariEiJ_G0031396	Rtcb	100	93.861	Mus_pahari
ENSSLDG00000019458	rtcb	100	93.861	MGP_SPRETEiJ_G0016507	Rtcb	100	93.861	Mus_spretus
ENSSLDG00000019458	rtcb	100	93.861	ENSMPUG00000012285	RTCB	100	93.861	Mustela_putorius_furo
ENSSLDG00000019458	rtcb	100	91.124	ENSMLUG00000007803	RTCB	100	91.124	Myotis_lucifugus
ENSSLDG00000019458	rtcb	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSSLDG00000019458	rtcb	100	94.257	ENSNBRG00000017202	rtcb	100	94.257	Neolamprologus_brichardi
ENSSLDG00000019458	rtcb	100	93.861	ENSNLEG00000004960	RTCB	100	93.861	Nomascus_leucogenys
ENSSLDG00000019458	rtcb	100	70.891	ENSMEUG00000007809	-	100	70.891	Notamacropus_eugenii
ENSSLDG00000019458	rtcb	73	97.500	ENSOPRG00000003488	RTCB	79	97.500	Ochotona_princeps
ENSSLDG00000019458	rtcb	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSSLDG00000019458	rtcb	100	62.574	ENSODEG00000005042	-	100	62.574	Octodon_degus
ENSSLDG00000019458	rtcb	100	95.050	ENSONIG00000007474	rtcb	100	95.050	Oreochromis_niloticus
ENSSLDG00000019458	rtcb	100	93.663	ENSOANG00000005524	RTCB	100	93.663	Ornithorhynchus_anatinus
ENSSLDG00000019458	rtcb	93	93.404	ENSOCUG00000008270	RTCB	96	93.404	Oryctolagus_cuniculus
ENSSLDG00000019458	rtcb	100	95.446	ENSORLG00000020093	rtcb	100	95.446	Oryzias_latipes
ENSSLDG00000019458	rtcb	100	95.446	ENSORLG00020003706	rtcb	100	95.446	Oryzias_latipes_hni
ENSSLDG00000019458	rtcb	100	95.644	ENSORLG00015002968	rtcb	100	95.644	Oryzias_latipes_hsok
ENSSLDG00000019458	rtcb	100	95.248	ENSOMEG00000021278	rtcb	100	95.248	Oryzias_melastigma
ENSSLDG00000019458	rtcb	100	93.069	ENSOGAG00000001425	RTCB	100	93.069	Otolemur_garnettii
ENSSLDG00000019458	rtcb	100	94.059	ENSOARG00000018008	RTCB	100	94.059	Ovis_aries
ENSSLDG00000019458	rtcb	100	93.861	ENSPPAG00000028667	RTCB	100	93.861	Pan_paniscus
ENSSLDG00000019458	rtcb	100	93.861	ENSPPRG00000004038	RTCB	100	93.861	Panthera_pardus
ENSSLDG00000019458	rtcb	94	89.684	ENSPTIG00000020499	RTCB	97	90.737	Panthera_tigris_altaica
ENSSLDG00000019458	rtcb	100	93.861	ENSPTRG00000014287	RTCB	100	93.861	Pan_troglodytes
ENSSLDG00000019458	rtcb	100	93.663	ENSPANG00000016035	RTCB	100	93.663	Papio_anubis
ENSSLDG00000019458	rtcb	100	94.653	ENSPKIG00000001881	rtcb	100	94.653	Paramormyrops_kingsleyae
ENSSLDG00000019458	rtcb	91	94.130	ENSPSIG00000011690	RTCB	100	94.130	Pelodiscus_sinensis
ENSSLDG00000019458	rtcb	100	97.228	ENSPMGG00000016672	rtcb	100	97.228	Periophthalmus_magnuspinnatus
ENSSLDG00000019458	rtcb	100	93.861	ENSPEMG00000019548	Rtcb	100	93.861	Peromyscus_maniculatus_bairdii
ENSSLDG00000019458	rtcb	100	91.089	ENSPMAG00000005657	rtcb	100	91.089	Petromyzon_marinus
ENSSLDG00000019458	rtcb	100	94.059	ENSPCIG00000009467	RTCB	100	94.059	Phascolarctos_cinereus
ENSSLDG00000019458	rtcb	100	96.238	ENSPFOG00000003058	rtcb	100	96.238	Poecilia_formosa
ENSSLDG00000019458	rtcb	100	96.040	ENSPLAG00000017663	rtcb	100	96.040	Poecilia_latipinna
ENSSLDG00000019458	rtcb	100	96.238	ENSPMEG00000006227	rtcb	100	96.238	Poecilia_mexicana
ENSSLDG00000019458	rtcb	100	95.644	ENSPREG00000018467	rtcb	100	95.644	Poecilia_reticulata
ENSSLDG00000019458	rtcb	100	93.861	ENSPPYG00000011752	RTCB	100	93.861	Pongo_abelii
ENSSLDG00000019458	rtcb	93	76.695	ENSPCAG00000013641	RTCB	100	76.695	Procavia_capensis
ENSSLDG00000019458	rtcb	100	93.861	ENSPCOG00000017243	RTCB	100	93.861	Propithecus_coquereli
ENSSLDG00000019458	rtcb	93	92.553	ENSPVAG00000002380	RTCB	100	92.553	Pteropus_vampyrus
ENSSLDG00000019458	rtcb	100	94.257	ENSPNYG00000022760	rtcb	100	94.257	Pundamilia_nyererei
ENSSLDG00000019458	rtcb	100	95.050	ENSPNAG00000009209	rtcb	100	95.050	Pygocentrus_nattereri
ENSSLDG00000019458	rtcb	100	93.861	ENSRNOG00000004813	Rtcb	100	93.861	Rattus_norvegicus
ENSSLDG00000019458	rtcb	100	86.166	ENSRBIG00000042090	RTCB	100	86.166	Rhinopithecus_bieti
ENSSLDG00000019458	rtcb	100	88.911	ENSSBOG00000020085	-	100	88.911	Saimiri_boliviensis_boliviensis
ENSSLDG00000019458	rtcb	94	94.515	ENSSHAG00000016277	RTCB	100	94.515	Sarcophilus_harrisii
ENSSLDG00000019458	rtcb	100	92.871	ENSSFOG00015011572	RTCB	100	92.871	Scleropages_formosus
ENSSLDG00000019458	rtcb	100	94.257	ENSSFOG00015000763	rtcb	100	94.257	Scleropages_formosus
ENSSLDG00000019458	rtcb	100	94.059	ENSSMAG00000005096	rtcb	100	94.059	Scophthalmus_maximus
ENSSLDG00000019458	rtcb	100	99.604	ENSSDUG00000012605	rtcb	100	99.604	Seriola_dumerili
ENSSLDG00000019458	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSSLDG00000019458	rtcb	100	92.871	ENSSPUG00000012814	RTCB	100	92.871	Sphenodon_punctatus
ENSSLDG00000019458	rtcb	100	97.228	ENSSPAG00000004623	rtcb	100	97.228	Stegastes_partitus
ENSSLDG00000019458	rtcb	100	93.861	ENSSSCG00000000158	RTCB	100	93.861	Sus_scrofa
ENSSLDG00000019458	rtcb	100	94.455	ENSTGUG00000010947	RTCB	99	94.455	Taeniopygia_guttata
ENSSLDG00000019458	rtcb	91	96.739	ENSTRUG00000009880	rtcb	100	96.739	Takifugu_rubripes
ENSSLDG00000019458	rtcb	100	94.455	ENSTNIG00000002484	rtcb	100	94.455	Tetraodon_nigroviridis
ENSSLDG00000019458	rtcb	100	80.990	ENSTBEG00000004418	RTCB	100	80.990	Tupaia_belangeri
ENSSLDG00000019458	rtcb	93	92.553	ENSTTRG00000006417	RTCB	100	92.553	Tursiops_truncatus
ENSSLDG00000019458	rtcb	100	93.861	ENSUAMG00000022792	RTCB	100	93.861	Ursus_americanus
ENSSLDG00000019458	rtcb	100	93.861	ENSUMAG00000017225	RTCB	100	93.861	Ursus_maritimus
ENSSLDG00000019458	rtcb	100	93.663	ENSVPAG00000005375	RTCB	100	93.663	Vicugna_pacos
ENSSLDG00000019458	rtcb	100	93.861	ENSVVUG00000023408	RTCB	100	94.349	Vulpes_vulpes
ENSSLDG00000019458	rtcb	100	93.465	ENSXETG00000011523	rtcb	100	93.465	Xenopus_tropicalis
ENSSLDG00000019458	rtcb	100	95.842	ENSXMAG00000002855	rtcb	100	95.842	Xiphophorus_maculatus