EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000019470 (Gene tree)
Gene ID: -
Gene Symbol: mrps27
Alias: zgc:100970
Full Name: mitochondrial ribosomal protein S27
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 8662 bases
Position: chrPEQF01099423.1:790419-799080
Accession: ZDB-GENE-040808-39
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000025027	MRP-S27	PF10037.9	3.5e-85	1	2
ENSSLDP00000025027	MRP-S27	PF10037.9	3.5e-85	2	2
ENSSLDP00000025004	MRP-S27	PF10037.9	1.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025813	-	564	-	ENSSLDP00000025027	187 (aa)	-	-
ENSSLDT00000025790	-	291	-	ENSSLDP00000025004	96 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000019470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019470	mrps27	95	67.539	ENSG00000113048	MRPS27	97	67.539	Homo_sapiens
ENSSLDG00000019470	mrps27	99	67.010	ENSCHOG00000002565	MRPS27	53	67.010	Choloepus_hoffmanni
ENSSLDG00000019470	mrps27	71	40.602	ENSCSAVG00000004679	-	51	40.602	Ciona_savignyi
ENSSLDG00000019470	mrps27	94	70.053	ENSFHEG00000019064	mrps27	97	70.053	Fundulus_heteroclitus
ENSSLDG00000019470	mrps27	93	72.778	ENSJJAG00000015087	-	90	72.778	Jaculus_jaculus
ENSSLDG00000019470	mrps27	90	72.159	ENSMICG00000004527	MRPS27	95	72.159	Microcebus_murinus
ENSSLDG00000019470	mrps27	90	89.205	ENSMMOG00000013203	mrps27	52	89.205	Mola_mola
ENSSLDG00000019470	mrps27	90	71.023	ENSMUSG00000041632	Mrps27	75	57.604	Mus_musculus
ENSSLDG00000019470	mrps27	93	72.067	ENSNBRG00000011162	-	92	74.444	Neolamprologus_brichardi
ENSSLDG00000019470	mrps27	95	67.368	ENSNLEG00000032219	-	97	67.368	Nomascus_leucogenys
ENSSLDG00000019470	mrps27	90	82.353	ENSORLG00000003800	mrps27	93	82.353	Oryzias_latipes
ENSSLDG00000019470	mrps27	100	64.583	ENSPPRG00000014416	MRPS27	95	70.430	Panthera_pardus
ENSSLDG00000019470	mrps27	100	65.625	ENSPTIG00000020435	MRPS27	92	71.823	Panthera_tigris_altaica
ENSSLDG00000019470	mrps27	97	72.959	ENSPMGG00000017275	mrps27	58	72.589	Periophthalmus_magnuspinnatus
ENSSLDG00000019470	mrps27	90	54.359	ENSPMAG00000009772	mrps27	59	54.359	Petromyzon_marinus
ENSSLDG00000019470	mrps27	95	82.162	ENSPLAG00000004766	MRPS27	95	82.162	Poecilia_latipinna
ENSSLDG00000019470	mrps27	98	79.275	ENSPREG00000015143	mrps27	99	79.275	Poecilia_reticulata
ENSSLDG00000019470	mrps27	98	68.367	ENSPCOG00000028430	MRPS27	100	68.367	Propithecus_coquereli
ENSSLDG00000019470	mrps27	90	71.023	ENSRNOG00000017272	Mrps27	74	70.423	Rattus_norvegicus
ENSSLDG00000019470	mrps27	95	83.243	ENSXCOG00000007727	mrps27	91	83.243	Xiphophorus_couchianus