EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000019495 (Gene tree)
Gene ID: -
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 14724 bases
Position: chrPEQF01098961.1:34135-48858
Accession: 111659580
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000025073	SF3b1	PF08920.10	1.3e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025859	-	5228	XM_023412569	ENSSLDP00000025073	1314 (aa)	XP_023268337	UPI000C6F90CA

Gene Model

Click here to download ENSSLDG00000019495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019495	sf3b1	100	93.313	ENSG00000115524	SF3B1	100	93.313	Homo_sapiens
ENSSLDG00000019495	sf3b1	100	98.935	ENSAPOG00000011894	sf3b1	100	98.935	Acanthochromis_polyacanthus
ENSSLDG00000019495	sf3b1	99	93.196	ENSAMEG00000013809	SF3B1	99	93.196	Ailuropoda_melanoleuca
ENSSLDG00000019495	sf3b1	100	97.565	ENSACIG00000020910	sf3b1	97	97.565	Amphilophus_citrinellus
ENSSLDG00000019495	sf3b1	100	99.087	ENSAOCG00000004478	sf3b1	100	99.087	Amphiprion_ocellaris
ENSSLDG00000019495	sf3b1	100	99.087	ENSAPEG00000012937	sf3b1	100	99.087	Amphiprion_percula
ENSSLDG00000019495	sf3b1	100	99.163	ENSATEG00000020435	sf3b1	100	99.163	Anabas_testudineus
ENSSLDG00000019495	sf3b1	99	93.640	ENSAPLG00000003993	SF3B1	99	93.640	Anas_platyrhynchos
ENSSLDG00000019495	sf3b1	100	93.460	ENSACAG00000009612	SF3B1	100	93.460	Anolis_carolinensis
ENSSLDG00000019495	sf3b1	100	93.313	ENSANAG00000021577	SF3B1	100	94.777	Aotus_nancymaae
ENSSLDG00000019495	sf3b1	100	97.717	ENSACLG00000023470	sf3b1	100	97.717	Astatotilapia_calliptera
ENSSLDG00000019495	sf3b1	100	97.188	ENSAMXG00000002219	sf3b1	100	97.188	Astyanax_mexicanus
ENSSLDG00000019495	sf3b1	100	93.313	ENSBTAG00000008915	SF3B1	100	93.313	Bos_taurus
ENSSLDG00000019495	sf3b1	98	65.416	WBGene00011605	sftb-1	97	65.566	Caenorhabditis_elegans
ENSSLDG00000019495	sf3b1	100	93.313	ENSCJAG00000003902	SF3B1	100	93.313	Callithrix_jacchus
ENSSLDG00000019495	sf3b1	100	93.313	ENSCAFG00000010826	SF3B1	100	93.313	Canis_familiaris
ENSSLDG00000019495	sf3b1	100	93.313	ENSCAFG00020004750	SF3B1	100	93.313	Canis_lupus_dingo
ENSSLDG00000019495	sf3b1	100	93.313	ENSCHIG00000015226	SF3B1	100	93.313	Capra_hircus
ENSSLDG00000019495	sf3b1	100	93.237	ENSTSYG00000009214	SF3B1	100	93.237	Carlito_syrichta
ENSSLDG00000019495	sf3b1	99	93.140	ENSCAPG00000006547	SF3B1	99	93.140	Cavia_aperea
ENSSLDG00000019495	sf3b1	99	93.262	ENSCPOG00000009353	SF3B1	100	93.262	Cavia_porcellus
ENSSLDG00000019495	sf3b1	100	93.313	ENSCCAG00000020506	SF3B1	100	93.313	Cebus_capucinus
ENSSLDG00000019495	sf3b1	100	93.313	ENSCATG00000035735	SF3B1	100	93.313	Cercocebus_atys
ENSSLDG00000019495	sf3b1	99	93.267	ENSCLAG00000014767	SF3B1	99	93.267	Chinchilla_lanigera
ENSSLDG00000019495	sf3b1	100	93.313	ENSCSAG00000011505	SF3B1	100	93.313	Chlorocebus_sabaeus
ENSSLDG00000019495	sf3b1	76	92.588	ENSCHOG00000009860	SF3B1	76	92.588	Choloepus_hoffmanni
ENSSLDG00000019495	sf3b1	100	93.607	ENSCPBG00000021902	SF3B1	99	94.865	Chrysemys_picta_bellii
ENSSLDG00000019495	sf3b1	68	78.081	ENSCING00000002558	-	99	78.516	Ciona_intestinalis
ENSSLDG00000019495	sf3b1	99	79.759	ENSCSAVG00000002559	-	99	79.759	Ciona_savignyi
ENSSLDG00000019495	sf3b1	100	93.313	ENSCANG00000029415	SF3B1	100	93.313	Colobus_angolensis_palliatus
ENSSLDG00000019495	sf3b1	100	93.313	ENSCGRG00001016990	Sf3b1	100	93.313	Cricetulus_griseus_chok1gshd
ENSSLDG00000019495	sf3b1	100	93.313	ENSCGRG00000005301	Sf3b1	100	93.313	Cricetulus_griseus_crigri
ENSSLDG00000019495	sf3b1	100	94.521	ENSCSEG00000003860	sf3b1	100	94.521	Cynoglossus_semilaevis
ENSSLDG00000019495	sf3b1	96	98.575	ENSCVAG00000003680	sf3b1	99	98.575	Cyprinodon_variegatus
ENSSLDG00000019495	sf3b1	100	95.817	ENSDARG00000056138	sf3b1	100	95.817	Danio_rerio
ENSSLDG00000019495	sf3b1	100	93.242	ENSDNOG00000011754	SF3B1	100	93.242	Dasypus_novemcinctus
ENSSLDG00000019495	sf3b1	99	91.348	ENSDORG00000002399	Sf3b1	100	91.271	Dipodomys_ordii
ENSSLDG00000019495	sf3b1	100	75.880	FBgn0031266	Sf3b1	100	75.880	Drosophila_melanogaster
ENSSLDG00000019495	sf3b1	83	92.110	ENSETEG00000009188	SF3B1	100	92.110	Echinops_telfairi
ENSSLDG00000019495	sf3b1	99	85.507	ENSEBUG00000004325	sf3b1	100	88.544	Eptatretus_burgeri
ENSSLDG00000019495	sf3b1	100	93.313	ENSEASG00005020159	SF3B1	98	93.313	Equus_asinus_asinus
ENSSLDG00000019495	sf3b1	100	93.313	ENSECAG00000021657	SF3B1	98	93.313	Equus_caballus
ENSSLDG00000019495	sf3b1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSSLDG00000019495	sf3b1	100	96.375	ENSELUG00000005977	sf3b1	98	96.375	Esox_lucius
ENSSLDG00000019495	sf3b1	100	93.313	ENSFCAG00000005038	SF3B1	100	93.313	Felis_catus
ENSSLDG00000019495	sf3b1	99	93.563	ENSFALG00000004281	SF3B1	99	93.563	Ficedula_albicollis
ENSSLDG00000019495	sf3b1	100	93.313	ENSFDAG00000017510	SF3B1	100	93.313	Fukomys_damarensis
ENSSLDG00000019495	sf3b1	100	97.414	ENSFHEG00000014333	sf3b1	100	97.414	Fundulus_heteroclitus
ENSSLDG00000019495	sf3b1	100	96.507	ENSGMOG00000006773	sf3b1	100	96.507	Gadus_morhua
ENSSLDG00000019495	sf3b1	100	93.683	ENSGALG00000008038	SF3B1	100	93.683	Gallus_gallus
ENSSLDG00000019495	sf3b1	98	98.533	ENSGAFG00000000704	sf3b1	100	98.533	Gambusia_affinis
ENSSLDG00000019495	sf3b1	100	97.492	ENSGACG00000008839	sf3b1	100	97.492	Gasterosteus_aculeatus
ENSSLDG00000019495	sf3b1	100	92.971	ENSGAGG00000017478	SF3B1	100	92.971	Gopherus_agassizii
ENSSLDG00000019495	sf3b1	99	88.055	ENSGGOG00000009264	SF3B1	99	88.132	Gorilla_gorilla
ENSSLDG00000019495	sf3b1	99	97.790	ENSHBUG00000007705	sf3b1	99	97.790	Haplochromis_burtoni
ENSSLDG00000019495	sf3b1	99	93.267	ENSHGLG00000008285	-	99	93.267	Heterocephalus_glaber_female
ENSSLDG00000019495	sf3b1	99	91.278	ENSHGLG00100005535	-	99	91.278	Heterocephalus_glaber_male
ENSSLDG00000019495	sf3b1	100	97.504	ENSHCOG00000016775	sf3b1	100	97.504	Hippocampus_comes
ENSSLDG00000019495	sf3b1	100	96.654	ENSIPUG00000013171	sf3b1	100	96.654	Ictalurus_punctatus
ENSSLDG00000019495	sf3b1	100	93.313	ENSSTOG00000011034	SF3B1	100	93.313	Ictidomys_tridecemlineatus
ENSSLDG00000019495	sf3b1	99	93.241	ENSJJAG00000010903	Sf3b1	99	93.241	Jaculus_jaculus
ENSSLDG00000019495	sf3b1	100	97.572	ENSKMAG00000004009	sf3b1	100	97.572	Kryptolebias_marmoratus
ENSSLDG00000019495	sf3b1	100	97.869	ENSLBEG00000022208	sf3b1	100	97.869	Labrus_bergylta
ENSSLDG00000019495	sf3b1	99	90.190	ENSLACG00000014832	SF3B1	99	90.266	Latimeria_chalumnae
ENSSLDG00000019495	sf3b1	100	95.609	ENSLOCG00000003899	sf3b1	100	95.609	Lepisosteus_oculatus
ENSSLDG00000019495	sf3b1	100	93.313	ENSLAFG00000001956	SF3B1	100	93.313	Loxodonta_africana
ENSSLDG00000019495	sf3b1	99	93.267	ENSMMUG00000022430	SF3B1	99	93.267	Macaca_mulatta
ENSSLDG00000019495	sf3b1	100	93.313	ENSMNEG00000042333	SF3B1	100	94.777	Macaca_nemestrina
ENSSLDG00000019495	sf3b1	94	88.719	ENSMLEG00000026141	SF3B1	98	88.567	Mandrillus_leucophaeus
ENSSLDG00000019495	sf3b1	100	98.935	ENSMAMG00000010241	sf3b1	100	98.935	Mastacembelus_armatus
ENSSLDG00000019495	sf3b1	100	97.717	ENSMZEG00005021254	sf3b1	100	97.717	Maylandia_zebra
ENSSLDG00000019495	sf3b1	99	93.103	ENSMGAG00000007017	SF3B1	99	93.103	Meleagris_gallopavo
ENSSLDG00000019495	sf3b1	99	89.059	ENSMAUG00000009071	Sf3b1	99	89.059	Mesocricetus_auratus
ENSSLDG00000019495	sf3b1	100	93.313	ENSMICG00000013879	SF3B1	100	93.313	Microcebus_murinus
ENSSLDG00000019495	sf3b1	99	88.991	ENSMOCG00000000455	Sf3b1	99	88.991	Microtus_ochrogaster
ENSSLDG00000019495	sf3b1	84	98.453	ENSMMOG00000000475	sf3b1	100	98.453	Mola_mola
ENSSLDG00000019495	sf3b1	100	93.009	ENSMODG00000012275	SF3B1	100	93.009	Monodelphis_domestica
ENSSLDG00000019495	sf3b1	100	98.554	ENSMALG00000017211	sf3b1	100	98.554	Monopterus_albus
ENSSLDG00000019495	sf3b1	100	93.313	MGP_CAROLIEiJ_G0014141	Sf3b1	100	93.313	Mus_caroli
ENSSLDG00000019495	sf3b1	100	93.313	ENSMUSG00000025982	Sf3b1	100	93.313	Mus_musculus
ENSSLDG00000019495	sf3b1	100	93.313	MGP_SPRETEiJ_G0014947	Sf3b1	100	93.313	Mus_spretus
ENSSLDG00000019495	sf3b1	100	93.313	ENSMPUG00000007799	SF3B1	100	93.313	Mustela_putorius_furo
ENSSLDG00000019495	sf3b1	100	92.173	ENSMLUG00000000840	SF3B1	100	92.173	Myotis_lucifugus
ENSSLDG00000019495	sf3b1	99	92.988	ENSNGAG00000021884	-	100	92.988	Nannospalax_galili
ENSSLDG00000019495	sf3b1	100	92.635	ENSNBRG00000015816	sf3b1	100	92.700	Neolamprologus_brichardi
ENSSLDG00000019495	sf3b1	100	93.313	ENSNLEG00000006861	SF3B1	100	93.313	Nomascus_leucogenys
ENSSLDG00000019495	sf3b1	69	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSSLDG00000019495	sf3b1	100	80.743	ENSOPRG00000008596	SF3B1	100	80.967	Ochotona_princeps
ENSSLDG00000019495	sf3b1	100	93.313	ENSODEG00000011153	-	100	93.313	Octodon_degus
ENSSLDG00000019495	sf3b1	100	97.717	ENSONIG00000013758	sf3b1	100	97.717	Oreochromis_niloticus
ENSSLDG00000019495	sf3b1	82	95.941	ENSOCUG00000012722	-	96	95.941	Oryctolagus_cuniculus
ENSSLDG00000019495	sf3b1	100	97.565	ENSORLG00000020219	sf3b1	100	97.565	Oryzias_latipes
ENSSLDG00000019495	sf3b1	100	97.565	ENSORLG00020001746	sf3b1	100	97.565	Oryzias_latipes_hni
ENSSLDG00000019495	sf3b1	64	96.204	ENSORLG00015001759	sf3b1	98	96.204	Oryzias_latipes_hsok
ENSSLDG00000019495	sf3b1	100	97.719	ENSOMEG00000019231	sf3b1	100	97.719	Oryzias_melastigma
ENSSLDG00000019495	sf3b1	100	93.313	ENSOARG00000015374	SF3B1	100	93.313	Ovis_aries
ENSSLDG00000019495	sf3b1	100	93.313	ENSPPAG00000035007	SF3B1	100	93.313	Pan_paniscus
ENSSLDG00000019495	sf3b1	100	93.313	ENSPPRG00000009090	SF3B1	100	93.313	Panthera_pardus
ENSSLDG00000019495	sf3b1	100	93.313	ENSPTIG00000021557	SF3B1	100	93.313	Panthera_tigris_altaica
ENSSLDG00000019495	sf3b1	99	85.878	ENSPTRG00000012771	SF3B1	99	85.878	Pan_troglodytes
ENSSLDG00000019495	sf3b1	100	93.313	ENSPANG00000013417	SF3B1	100	93.313	Papio_anubis
ENSSLDG00000019495	sf3b1	100	96.128	ENSPKIG00000000784	sf3b1	100	96.128	Paramormyrops_kingsleyae
ENSSLDG00000019495	sf3b1	99	92.485	ENSPSIG00000017222	SF3B1	98	92.485	Pelodiscus_sinensis
ENSSLDG00000019495	sf3b1	91	97.313	ENSPMGG00000004330	sf3b1	99	97.313	Periophthalmus_magnuspinnatus
ENSSLDG00000019495	sf3b1	99	93.267	ENSPEMG00000010699	Sf3b1	100	93.267	Peromyscus_maniculatus_bairdii
ENSSLDG00000019495	sf3b1	100	88.738	ENSPMAG00000001311	sf3b1	100	89.040	Petromyzon_marinus
ENSSLDG00000019495	sf3b1	100	93.009	ENSPCIG00000010642	SF3B1	100	93.009	Phascolarctos_cinereus
ENSSLDG00000019495	sf3b1	100	98.632	ENSPFOG00000000073	sf3b1	100	98.632	Poecilia_formosa
ENSSLDG00000019495	sf3b1	100	98.783	ENSPLAG00000002293	sf3b1	100	98.783	Poecilia_latipinna
ENSSLDG00000019495	sf3b1	100	98.707	ENSPMEG00000000446	sf3b1	98	98.707	Poecilia_mexicana
ENSSLDG00000019495	sf3b1	100	98.859	ENSPREG00000019652	sf3b1	100	98.859	Poecilia_reticulata
ENSSLDG00000019495	sf3b1	82	96.861	ENSPPYG00000013044	SF3B1	95	96.861	Pongo_abelii
ENSSLDG00000019495	sf3b1	100	93.161	ENSPCAG00000009292	SF3B1	100	93.161	Procavia_capensis
ENSSLDG00000019495	sf3b1	100	93.313	ENSPCOG00000024074	SF3B1	100	93.313	Propithecus_coquereli
ENSSLDG00000019495	sf3b1	100	93.313	ENSPVAG00000008302	SF3B1	100	93.313	Pteropus_vampyrus
ENSSLDG00000019495	sf3b1	100	97.641	ENSPNYG00000014939	sf3b1	100	97.641	Pundamilia_nyererei
ENSSLDG00000019495	sf3b1	100	96.884	ENSPNAG00000008288	sf3b1	100	96.884	Pygocentrus_nattereri
ENSSLDG00000019495	sf3b1	100	93.313	ENSRNOG00000013516	Sf3b1	100	93.313	Rattus_norvegicus
ENSSLDG00000019495	sf3b1	99	89.574	ENSRBIG00000026096	SF3B1	100	89.574	Rhinopithecus_bieti
ENSSLDG00000019495	sf3b1	100	93.313	ENSRROG00000031308	SF3B1	100	93.313	Rhinopithecus_roxellana
ENSSLDG00000019495	sf3b1	100	93.313	ENSSBOG00000020080	SF3B1	100	93.313	Saimiri_boliviensis_boliviensis
ENSSLDG00000019495	sf3b1	100	93.009	ENSSHAG00000017564	SF3B1	100	93.009	Sarcophilus_harrisii
ENSSLDG00000019495	sf3b1	100	96.578	ENSSFOG00015021535	sf3b1	100	96.578	Scleropages_formosus
ENSSLDG00000019495	sf3b1	99	98.103	ENSSMAG00000013977	sf3b1	99	98.103	Scophthalmus_maximus
ENSSLDG00000019495	sf3b1	100	99.924	ENSSDUG00000017422	sf3b1	100	99.924	Seriola_dumerili
ENSSLDG00000019495	sf3b1	75	98.592	ENSSARG00000007016	SF3B1	75	98.592	Sorex_araneus
ENSSLDG00000019495	sf3b1	100	93.379	ENSSPUG00000000410	SF3B1	100	93.379	Sphenodon_punctatus
ENSSLDG00000019495	sf3b1	100	98.935	ENSSPAG00000010451	sf3b1	99	98.935	Stegastes_partitus
ENSSLDG00000019495	sf3b1	91	92.923	ENSSSCG00000016075	SF3B1	100	94.777	Sus_scrofa
ENSSLDG00000019495	sf3b1	100	93.683	ENSTGUG00000010553	SF3B1	100	93.683	Taeniopygia_guttata
ENSSLDG00000019495	sf3b1	100	97.945	ENSTRUG00000015534	sf3b1	100	97.945	Takifugu_rubripes
ENSSLDG00000019495	sf3b1	84	97.107	ENSTBEG00000008714	SF3B1	93	97.107	Tupaia_belangeri
ENSSLDG00000019495	sf3b1	92	93.173	ENSTTRG00000003414	SF3B1	92	93.173	Tursiops_truncatus
ENSSLDG00000019495	sf3b1	94	83.252	ENSUAMG00000018506	SF3B1	99	97.571	Ursus_americanus
ENSSLDG00000019495	sf3b1	100	93.313	ENSUMAG00000020945	SF3B1	100	93.313	Ursus_maritimus
ENSSLDG00000019495	sf3b1	95	93.366	ENSVPAG00000005798	SF3B1	96	93.366	Vicugna_pacos
ENSSLDG00000019495	sf3b1	100	93.313	ENSVVUG00000025948	SF3B1	95	93.313	Vulpes_vulpes
ENSSLDG00000019495	sf3b1	100	91.945	ENSXETG00000013339	sf3b1	100	91.945	Xenopus_tropicalis
ENSSLDG00000019495	sf3b1	100	94.068	ENSXCOG00000018086	sf3b1	100	94.373	Xiphophorus_couchianus
ENSSLDG00000019495	sf3b1	100	98.555	ENSXMAG00000007369	sf3b1	100	98.613	Xiphophorus_maculatus