EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000019531 (Gene tree)
Gene ID: -
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 18489 bases
Position: chrPEQF01098737.1:31406-49894
Accession: 111654086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000025078	Rif1_N	PF12231.8	1.7e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000025864	-	8743	XM_023404962	ENSSLDP00000025078	2464 (aa)	XP_023260730	UPI000C6FC2D0

Gene Model

Click here to download ENSSLDG00000019531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019531	rif1	53	48.159	ENSG00000080345	RIF1	92	56.274	Homo_sapiens
ENSSLDG00000019531	rif1	66	73.526	ENSAPOG00000011073	rif1	99	73.649	Acanthochromis_polyacanthus
ENSSLDG00000019531	rif1	51	50.078	ENSAMEG00000008461	RIF1	50	50.717	Ailuropoda_melanoleuca
ENSSLDG00000019531	rif1	93	78.398	ENSACIG00000017765	rif1	99	73.928	Amphilophus_citrinellus
ENSSLDG00000019531	rif1	66	73.587	ENSAOCG00000017231	rif1	65	73.391	Amphiprion_ocellaris
ENSSLDG00000019531	rif1	95	80.562	ENSAPEG00000013228	rif1	69	80.562	Amphiprion_percula
ENSSLDG00000019531	rif1	100	71.743	ENSATEG00000022887	rif1	100	74.419	Anabas_testudineus
ENSSLDG00000019531	rif1	66	48.892	ENSACAG00000003714	RIF1	66	49.114	Anolis_carolinensis
ENSSLDG00000019531	rif1	67	48.961	ENSANAG00000024840	RIF1	63	50.957	Aotus_nancymaae
ENSSLDG00000019531	rif1	72	52.652	ENSAMXG00000010910	rif1	62	58.366	Astyanax_mexicanus
ENSSLDG00000019531	rif1	60	50.394	ENSBTAG00000021020	RIF1	56	51.315	Bos_taurus
ENSSLDG00000019531	rif1	66	49.280	ENSCJAG00000003138	RIF1	63	50.678	Callithrix_jacchus
ENSSLDG00000019531	rif1	51	49.652	ENSCAFG00020016401	RIF1	50	50.119	Canis_lupus_dingo
ENSSLDG00000019531	rif1	52	49.318	ENSCHIG00000020327	RIF1	50	50.839	Capra_hircus
ENSSLDG00000019531	rif1	56	41.192	ENSCAPG00000008957	RIF1	69	41.192	Cavia_aperea
ENSSLDG00000019531	rif1	51	47.559	ENSCPOG00000037898	RIF1	50	48.343	Cavia_porcellus
ENSSLDG00000019531	rif1	68	47.368	ENSCCAG00000024760	RIF1	63	49.045	Cebus_capucinus
ENSSLDG00000019531	rif1	52	48.911	ENSCATG00000033353	RIF1	50	50.238	Cercocebus_atys
ENSSLDG00000019531	rif1	52	48.387	ENSCLAG00000001517	RIF1	63	51.607	Chinchilla_lanigera
ENSSLDG00000019531	rif1	54	47.685	ENSCSAG00000016089	RIF1	54	47.688	Chlorocebus_sabaeus
ENSSLDG00000019531	rif1	65	51.595	ENSCPBG00000025885	RIF1	69	52.023	Chrysemys_picta_bellii
ENSSLDG00000019531	rif1	54	47.574	ENSCANG00000028962	RIF1	52	50.238	Colobus_angolensis_palliatus
ENSSLDG00000019531	rif1	53	46.439	ENSCGRG00001024589	Rif1	50	48.965	Cricetulus_griseus_chok1gshd
ENSSLDG00000019531	rif1	52	47.770	ENSCGRG00000010713	Rif1	50	50.447	Cricetulus_griseus_crigri
ENSSLDG00000019531	rif1	96	62.946	ENSCSEG00000003945	rif1	99	62.614	Cynoglossus_semilaevis
ENSSLDG00000019531	rif1	99	60.767	ENSCVAG00000022479	rif1	99	60.406	Cyprinodon_variegatus
ENSSLDG00000019531	rif1	51	48.527	ENSDNOG00000011194	RIF1	57	44.886	Dasypus_novemcinctus
ENSSLDG00000019531	rif1	59	59.735	ENSETEG00000012421	RIF1	59	59.735	Echinops_telfairi
ENSSLDG00000019531	rif1	90	61.625	ENSELUG00000006826	rif1	73	64.938	Esox_lucius
ENSSLDG00000019531	rif1	51	49.613	ENSFCAG00000029742	RIF1	50	50.358	Felis_catus
ENSSLDG00000019531	rif1	64	49.030	ENSFALG00000013874	RIF1	65	54.383	Ficedula_albicollis
ENSSLDG00000019531	rif1	99	62.228	ENSFHEG00000013721	rif1	99	62.083	Fundulus_heteroclitus
ENSSLDG00000019531	rif1	66	70.229	ENSGMOG00000003517	rif1	99	70.229	Gadus_morhua
ENSSLDG00000019531	rif1	96	77.708	ENSGAFG00000017196	rif1	99	77.708	Gambusia_affinis
ENSSLDG00000019531	rif1	65	51.231	ENSGAGG00000012595	RIF1	67	51.744	Gopherus_agassizii
ENSSLDG00000019531	rif1	50	50.394	ENSHGLG00100009807	RIF1	53	51.445	Heterocephalus_glaber_male
ENSSLDG00000019531	rif1	99	66.969	ENSHCOG00000015943	rif1	91	67.834	Hippocampus_comes
ENSSLDG00000019531	rif1	78	58.942	ENSIPUG00000021703	rif1	75	59.149	Ictalurus_punctatus
ENSSLDG00000019531	rif1	99	61.724	ENSKMAG00000002852	rif1	99	61.715	Kryptolebias_marmoratus
ENSSLDG00000019531	rif1	99	71.805	ENSLBEG00000023196	rif1	93	74.675	Labrus_bergylta
ENSSLDG00000019531	rif1	65	56.396	ENSLACG00000005425	RIF1	66	56.994	Latimeria_chalumnae
ENSSLDG00000019531	rif1	88	50.977	ENSLOCG00000002657	rif1	84	56.522	Lepisosteus_oculatus
ENSSLDG00000019531	rif1	51	50.701	ENSLAFG00000009796	RIF1	50	51.559	Loxodonta_africana
ENSSLDG00000019531	rif1	52	49.246	ENSMFAG00000032233	RIF1	50	50.598	Macaca_fascicularis
ENSSLDG00000019531	rif1	52	49.246	ENSMMUG00000008611	RIF1	50	50.598	Macaca_mulatta
ENSSLDG00000019531	rif1	52	49.247	ENSMNEG00000031616	RIF1	50	50.597	Macaca_nemestrina
ENSSLDG00000019531	rif1	52	48.911	ENSMLEG00000042945	RIF1	50	50.238	Mandrillus_leucophaeus
ENSSLDG00000019531	rif1	94	72.478	ENSMAMG00000001745	rif1	73	76.032	Mastacembelus_armatus
ENSSLDG00000019531	rif1	97	78.884	ENSMZEG00005020920	rif1	99	79.163	Maylandia_zebra
ENSSLDG00000019531	rif1	78	51.637	ENSMGAG00000012732	RIF1	68	51.990	Meleagris_gallopavo
ENSSLDG00000019531	rif1	55	45.527	ENSMOCG00000009381	Rif1	65	42.645	Microtus_ochrogaster
ENSSLDG00000019531	rif1	99	62.923	ENSMMOG00000006519	rif1	100	62.858	Mola_mola
ENSSLDG00000019531	rif1	67	48.458	ENSMODG00000003703	RIF1	51	50.279	Monodelphis_domestica
ENSSLDG00000019531	rif1	78	71.683	ENSMALG00000016759	rif1	87	71.619	Monopterus_albus
ENSSLDG00000019531	rif1	61	50.402	MGP_PahariEiJ_G0025006	Rif1	66	47.987	Mus_pahari
ENSSLDG00000019531	rif1	99	73.009	ENSNBRG00000014257	rif1	99	72.946	Neolamprologus_brichardi
ENSSLDG00000019531	rif1	53	47.619	ENSNLEG00000010955	RIF1	62	49.370	Nomascus_leucogenys
ENSSLDG00000019531	rif1	99	69.302	ENSONIG00000013657	rif1	100	69.544	Oreochromis_niloticus
ENSSLDG00000019531	rif1	54	55.691	ENSOANG00000006078	-	55	55.691	Ornithorhynchus_anatinus
ENSSLDG00000019531	rif1	99	57.396	ENSORLG00020001302	rif1	99	57.477	Oryzias_latipes_hni
ENSSLDG00000019531	rif1	99	56.880	ENSORLG00015000009	rif1	99	56.880	Oryzias_latipes_hsok
ENSSLDG00000019531	rif1	53	48.124	ENSPPAG00000023754	RIF1	50	50.040	Pan_paniscus
ENSSLDG00000019531	rif1	53	48.197	ENSPTRG00000012534	RIF1	50	50.119	Pan_troglodytes
ENSSLDG00000019531	rif1	52	48.986	ENSPANG00000008525	RIF1	50	50.317	Papio_anubis
ENSSLDG00000019531	rif1	88	57.995	ENSPKIG00000004267	rif1	94	57.891	Paramormyrops_kingsleyae
ENSSLDG00000019531	rif1	77	64.529	ENSPMGG00000016141	rif1	95	61.735	Periophthalmus_magnuspinnatus
ENSSLDG00000019531	rif1	68	48.286	ENSPEMG00000000446	Rif1	65	50.407	Peromyscus_maniculatus_bairdii
ENSSLDG00000019531	rif1	68	48.441	ENSPCIG00000009185	RIF1	65	50.955	Phascolarctos_cinereus
ENSSLDG00000019531	rif1	93	61.445	ENSPFOG00000000554	-	99	61.188	Poecilia_formosa
ENSSLDG00000019531	rif1	99	62.888	ENSPFOG00000017804	rif1	99	62.766	Poecilia_formosa
ENSSLDG00000019531	rif1	96	72.753	ENSPLAG00000017945	rif1	98	72.469	Poecilia_latipinna
ENSSLDG00000019531	rif1	90	60.457	ENSPMEG00000006897	-	99	60.196	Poecilia_mexicana
ENSSLDG00000019531	rif1	96	73.692	ENSPREG00000018052	rif1	99	73.692	Poecilia_reticulata
ENSSLDG00000019531	rif1	67	49.209	ENSPCOG00000027888	RIF1	62	51.167	Propithecus_coquereli
ENSSLDG00000019531	rif1	97	79.628	ENSPNYG00000012940	rif1	99	79.535	Pundamilia_nyererei
ENSSLDG00000019531	rif1	54	47.311	ENSRBIG00000003704	RIF1	50	49.960	Rhinopithecus_bieti
ENSSLDG00000019531	rif1	54	48.073	ENSRROG00000028206	RIF1	50	50.000	Rhinopithecus_roxellana
ENSSLDG00000019531	rif1	64	53.571	ENSSBOG00000029530	RIF1	61	53.571	Saimiri_boliviensis_boliviensis
ENSSLDG00000019531	rif1	50	50.719	ENSSHAG00000018552	RIF1	51	50.846	Sarcophilus_harrisii
ENSSLDG00000019531	rif1	77	61.345	ENSSFOG00015021539	rif1	82	61.345	Scleropages_formosus
ENSSLDG00000019531	rif1	99	74.876	ENSSMAG00000011704	rif1	81	72.736	Scophthalmus_maximus
ENSSLDG00000019531	rif1	100	87.556	ENSSDUG00000015632	rif1	99	89.177	Seriola_dumerili
ENSSLDG00000019531	rif1	64	50.853	ENSSPUG00000003062	RIF1	66	51.808	Sphenodon_punctatus
ENSSLDG00000019531	rif1	67	78.269	ENSSPAG00000018359	rif1	97	78.269	Stegastes_partitus
ENSSLDG00000019531	rif1	51	50.194	ENSSSCG00000016395	RIF1	50	51.549	Sus_scrofa
ENSSLDG00000019531	rif1	99	59.601	ENSTRUG00000015808	rif1	86	70.263	Takifugu_rubripes
ENSSLDG00000019531	rif1	75	62.096	ENSTNIG00000011538	rif1	99	58.310	Tetraodon_nigroviridis
ENSSLDG00000019531	rif1	60	54.175	ENSTBEG00000016082	RIF1	58	54.175	Tupaia_belangeri
ENSSLDG00000019531	rif1	51	49.572	ENSUMAG00000000337	RIF1	50	50.120	Ursus_maritimus
ENSSLDG00000019531	rif1	51	50.154	ENSVVUG00000011293	RIF1	50	50.633	Vulpes_vulpes
ENSSLDG00000019531	rif1	76	49.544	ENSXETG00000004530	rif1	78	49.544	Xenopus_tropicalis
ENSSLDG00000019531	rif1	97	66.667	ENSXMAG00000000506	rif1	99	66.667	Xiphophorus_maculatus