EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000019577 (Gene tree)
Gene ID: -
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 16480 bases
Position: chrPEQF01098583.1:182544-199023
Accession: 111652887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000025215	TUDOR	PF00567.24	8.1e-72	1	4
ENSSLDP00000025215	TUDOR	PF00567.24	8.1e-72	2	4
ENSSLDP00000025215	TUDOR	PF00567.24	8.1e-72	3	4
ENSSLDP00000025215	TUDOR	PF00567.24	8.1e-72	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000026003	-	4296	XM_023403281	ENSSLDP00000025215	1431 (aa)	XP_023259049	-

Gene Model

Click here to download ENSSLDG00000019577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019577	rnf17	94	31.913	ENSG00000132972	RNF17	99	35.641	Homo_sapiens
ENSSLDG00000019577	rnf17	99	69.806	ENSAPOG00000017034	rnf17	97	69.875	Acanthochromis_polyacanthus
ENSSLDG00000019577	rnf17	95	31.345	ENSAMEG00000017340	RNF17	85	31.327	Ailuropoda_melanoleuca
ENSSLDG00000019577	rnf17	99	71.905	ENSAOCG00000018283	rnf17	91	71.905	Amphiprion_ocellaris
ENSSLDG00000019577	rnf17	85	80.952	ENSAPEG00000022338	rnf17	86	80.952	Amphiprion_percula
ENSSLDG00000019577	rnf17	99	75.087	ENSATEG00000002067	rnf17	99	74.391	Anabas_testudineus
ENSSLDG00000019577	rnf17	90	31.205	ENSAPLG00000003969	RNF17	93	30.830	Anas_platyrhynchos
ENSSLDG00000019577	rnf17	75	35.058	ENSACAG00000001418	RNF17	71	34.351	Anolis_carolinensis
ENSSLDG00000019577	rnf17	99	69.444	ENSACLG00000018279	rnf17	91	69.444	Astatotilapia_calliptera
ENSSLDG00000019577	rnf17	89	48.624	ENSAMXG00000011002	rnf17	94	47.894	Astyanax_mexicanus
ENSSLDG00000019577	rnf17	75	35.092	ENSCJAG00000018937	RNF17	83	34.851	Callithrix_jacchus
ENSSLDG00000019577	rnf17	95	31.561	ENSCAFG00000007418	RNF17	77	34.248	Canis_familiaris
ENSSLDG00000019577	rnf17	76	34.258	ENSCHIG00000026716	RNF17	83	34.305	Capra_hircus
ENSSLDG00000019577	rnf17	75	35.043	ENSTSYG00000000365	RNF17	82	35.325	Carlito_syrichta
ENSSLDG00000019577	rnf17	75	35.481	ENSCCAG00000026725	RNF17	83	34.142	Cebus_capucinus
ENSSLDG00000019577	rnf17	94	31.729	ENSCATG00000040352	RNF17	83	34.418	Cercocebus_atys
ENSSLDG00000019577	rnf17	75	34.775	ENSCLAG00000004127	RNF17	88	31.511	Chinchilla_lanigera
ENSSLDG00000019577	rnf17	94	31.590	ENSCSAG00000018019	RNF17	69	34.745	Chlorocebus_sabaeus
ENSSLDG00000019577	rnf17	51	44.444	ENSCHOG00000013310	RNF17	50	44.444	Choloepus_hoffmanni
ENSSLDG00000019577	rnf17	96	32.157	ENSCPBG00000020920	RNF17	91	32.247	Chrysemys_picta_bellii
ENSSLDG00000019577	rnf17	94	31.729	ENSCANG00000032927	RNF17	83	34.760	Colobus_angolensis_palliatus
ENSSLDG00000019577	rnf17	75	34.786	ENSCGRG00001022658	Rnf17	86	31.314	Cricetulus_griseus_chok1gshd
ENSSLDG00000019577	rnf17	75	34.786	ENSCGRG00000009924	Rnf17	86	31.314	Cricetulus_griseus_crigri
ENSSLDG00000019577	rnf17	96	60.275	ENSCSEG00000008626	rnf17	83	59.504	Cynoglossus_semilaevis
ENSSLDG00000019577	rnf17	79	67.151	ENSCVAG00000017008	rnf17	93	67.151	Cyprinodon_variegatus
ENSSLDG00000019577	rnf17	99	44.275	ENSDARG00000056387	rnf17	84	47.430	Danio_rerio
ENSSLDG00000019577	rnf17	75	33.771	ENSDNOG00000006115	RNF17	89	30.381	Dasypus_novemcinctus
ENSSLDG00000019577	rnf17	99	30.572	ENSECAG00000017152	RNF17	88	30.501	Equus_caballus
ENSSLDG00000019577	rnf17	65	33.473	ENSEEUG00000000332	RNF17	65	33.473	Erinaceus_europaeus
ENSSLDG00000019577	rnf17	99	50.766	ENSELUG00000005626	rnf17	91	50.501	Esox_lucius
ENSSLDG00000019577	rnf17	99	30.903	ENSFCAG00000004914	RNF17	83	33.218	Felis_catus
ENSSLDG00000019577	rnf17	75	34.283	ENSFALG00000008766	RNF17	72	34.283	Ficedula_albicollis
ENSSLDG00000019577	rnf17	75	33.594	ENSFDAG00000017857	RNF17	85	31.203	Fukomys_damarensis
ENSSLDG00000019577	rnf17	99	61.303	ENSFHEG00000014822	rnf17	91	61.371	Fundulus_heteroclitus
ENSSLDG00000019577	rnf17	81	74.576	ENSGAFG00000004463	rnf17	89	74.576	Gambusia_affinis
ENSSLDG00000019577	rnf17	91	31.841	ENSGAGG00000016999	RNF17	90	31.605	Gopherus_agassizii
ENSSLDG00000019577	rnf17	95	32.125	ENSGGOG00000014491	RNF17	83	34.760	Gorilla_gorilla
ENSSLDG00000019577	rnf17	99	69.444	ENSHBUG00000003554	rnf17	91	69.444	Haplochromis_burtoni
ENSSLDG00000019577	rnf17	75	34.676	ENSHGLG00000007270	RNF17	86	31.276	Heterocephalus_glaber_female
ENSSLDG00000019577	rnf17	95	31.389	ENSHGLG00100017393	RNF17	86	31.001	Heterocephalus_glaber_male
ENSSLDG00000019577	rnf17	81	56.627	ENSHCOG00000017676	rnf17	86	56.627	Hippocampus_comes
ENSSLDG00000019577	rnf17	90	50.276	ENSIPUG00000001087	rnf17	93	44.544	Ictalurus_punctatus
ENSSLDG00000019577	rnf17	75	34.474	ENSJJAG00000016584	Rnf17	91	30.918	Jaculus_jaculus
ENSSLDG00000019577	rnf17	99	67.847	ENSKMAG00000013403	rnf17	90	67.916	Kryptolebias_marmoratus
ENSSLDG00000019577	rnf17	99	67.481	ENSLBEG00000014910	rnf17	96	67.202	Labrus_bergylta
ENSSLDG00000019577	rnf17	78	32.941	ENSLACG00000000323	RNF17	81	37.263	Latimeria_chalumnae
ENSSLDG00000019577	rnf17	99	37.380	ENSLOCG00000010768	rnf17	90	37.100	Lepisosteus_oculatus
ENSSLDG00000019577	rnf17	94	31.770	ENSMFAG00000032388	RNF17	83	34.418	Macaca_fascicularis
ENSSLDG00000019577	rnf17	94	31.770	ENSMMUG00000014610	RNF17	83	34.418	Macaca_mulatta
ENSSLDG00000019577	rnf17	94	31.840	ENSMNEG00000011234	RNF17	83	34.589	Macaca_nemestrina
ENSSLDG00000019577	rnf17	94	31.675	ENSMLEG00000030227	RNF17	75	32.753	Mandrillus_leucophaeus
ENSSLDG00000019577	rnf17	89	75.309	ENSMAMG00000020403	rnf17	91	75.309	Mastacembelus_armatus
ENSSLDG00000019577	rnf17	99	69.444	ENSMZEG00005019166	rnf17	91	69.444	Maylandia_zebra
ENSSLDG00000019577	rnf17	79	30.968	ENSMGAG00000015138	RNF17	88	31.598	Meleagris_gallopavo
ENSSLDG00000019577	rnf17	75	34.201	ENSMAUG00000004788	Rnf17	86	31.212	Mesocricetus_auratus
ENSSLDG00000019577	rnf17	95	31.359	ENSMICG00000010364	RNF17	85	31.806	Microcebus_murinus
ENSSLDG00000019577	rnf17	68	34.586	ENSMOCG00000011818	-	92	34.722	Microtus_ochrogaster
ENSSLDG00000019577	rnf17	78	84.091	ENSMMOG00000019514	rnf17	89	84.091	Mola_mola
ENSSLDG00000019577	rnf17	95	32.627	ENSMODG00000007827	RNF17	69	35.427	Monodelphis_domestica
ENSSLDG00000019577	rnf17	98	68.065	ENSMALG00000016943	rnf17	98	67.852	Monopterus_albus
ENSSLDG00000019577	rnf17	99	31.146	MGP_CAROLIEiJ_G0019337	Rnf17	89	31.451	Mus_caroli
ENSSLDG00000019577	rnf17	75	35.052	ENSMUSG00000000365	Rnf17	89	31.489	Mus_musculus
ENSSLDG00000019577	rnf17	75	35.222	MGP_PahariEiJ_G0030355	Rnf17	89	31.320	Mus_pahari
ENSSLDG00000019577	rnf17	75	35.402	MGP_SPRETEiJ_G0020228	Rnf17	89	31.728	Mus_spretus
ENSSLDG00000019577	rnf17	75	34.696	ENSMPUG00000013305	RNF17	69	34.916	Mustela_putorius_furo
ENSSLDG00000019577	rnf17	95	31.634	ENSMLUG00000003903	RNF17	87	31.391	Myotis_lucifugus
ENSSLDG00000019577	rnf17	75	34.912	ENSNGAG00000013553	Rnf17	88	30.749	Nannospalax_galili
ENSSLDG00000019577	rnf17	80	62.338	ENSNBRG00000012006	rnf17	86	62.338	Neolamprologus_brichardi
ENSSLDG00000019577	rnf17	94	31.770	ENSNLEG00000013780	RNF17	83	33.907	Nomascus_leucogenys
ENSSLDG00000019577	rnf17	99	68.767	ENSONIG00000015746	rnf17	98	66.047	Oreochromis_niloticus
ENSSLDG00000019577	rnf17	95	31.202	ENSOCUG00000007384	RNF17	68	34.416	Oryctolagus_cuniculus
ENSSLDG00000019577	rnf17	90	56.373	ENSORLG00000012818	rnf17	93	55.809	Oryzias_latipes
ENSSLDG00000019577	rnf17	99	56.017	ENSORLG00020009879	-	90	55.525	Oryzias_latipes_hni
ENSSLDG00000019577	rnf17	99	55.862	ENSORLG00015013027	-	90	55.017	Oryzias_latipes_hsok
ENSSLDG00000019577	rnf17	82	64.706	ENSOMEG00000009891	rnf17	95	62.400	Oryzias_melastigma
ENSSLDG00000019577	rnf17	75	34.181	ENSOGAG00000014803	RNF17	69	34.619	Otolemur_garnettii
ENSSLDG00000019577	rnf17	76	34.113	ENSOARG00000014641	RNF17	71	33.914	Ovis_aries
ENSSLDG00000019577	rnf17	79	34.653	ENSPPAG00000028779	RNF17	83	34.768	Pan_paniscus
ENSSLDG00000019577	rnf17	95	31.575	ENSPPRG00000009230	RNF17	83	33.391	Panthera_pardus
ENSSLDG00000019577	rnf17	95	31.437	ENSPTIG00000001738	RNF17	83	33.218	Panthera_tigris_altaica
ENSSLDG00000019577	rnf17	94	32.000	ENSPTRG00000005713	RNF17	83	34.596	Pan_troglodytes
ENSSLDG00000019577	rnf17	94	31.840	ENSPANG00000007640	RNF17	83	33.849	Papio_anubis
ENSSLDG00000019577	rnf17	83	44.007	ENSPKIG00000001648	rnf17	91	45.103	Paramormyrops_kingsleyae
ENSSLDG00000019577	rnf17	75	35.395	ENSPSIG00000011245	RNF17	99	35.395	Pelodiscus_sinensis
ENSSLDG00000019577	rnf17	75	35.670	ENSPEMG00000008693	Rnf17	70	35.000	Peromyscus_maniculatus_bairdii
ENSSLDG00000019577	rnf17	62	35.408	ENSPCIG00000009190	-	94	35.282	Phascolarctos_cinereus
ENSSLDG00000019577	rnf17	99	63.324	ENSPFOG00000007124	rnf17	91	63.324	Poecilia_formosa
ENSSLDG00000019577	rnf17	99	64.558	ENSPLAG00000006198	rnf17	91	64.762	Poecilia_latipinna
ENSSLDG00000019577	rnf17	99	65.025	ENSPMEG00000022432	rnf17	99	65.376	Poecilia_mexicana
ENSSLDG00000019577	rnf17	78	68.421	ENSPREG00000001414	rnf17	80	68.421	Poecilia_reticulata
ENSSLDG00000019577	rnf17	94	32.033	ENSPPYG00000005215	RNF17	69	35.100	Pongo_abelii
ENSSLDG00000019577	rnf17	56	31.933	ENSPCOG00000020211	RNF17	69	42.500	Propithecus_coquereli
ENSSLDG00000019577	rnf17	72	47.727	ENSPVAG00000013021	RNF17	67	47.727	Pteropus_vampyrus
ENSSLDG00000019577	rnf17	89	52.385	ENSPNAG00000027505	rnf17	92	52.385	Pygocentrus_nattereri
ENSSLDG00000019577	rnf17	75	34.855	ENSRNOG00000008059	Rnf17	86	31.241	Rattus_norvegicus
ENSSLDG00000019577	rnf17	94	30.282	ENSRBIG00000027010	RNF17	75	32.365	Rhinopithecus_bieti
ENSSLDG00000019577	rnf17	94	31.272	ENSRROG00000022801	RNF17	83	34.315	Rhinopithecus_roxellana
ENSSLDG00000019577	rnf17	75	35.526	ENSSBOG00000021661	RNF17	83	34.489	Saimiri_boliviensis_boliviensis
ENSSLDG00000019577	rnf17	95	31.975	ENSSHAG00000005609	RNF17	85	32.320	Sarcophilus_harrisii
ENSSLDG00000019577	rnf17	74	43.905	ENSSFOG00015023037	rnf17	81	43.419	Scleropages_formosus
ENSSLDG00000019577	rnf17	99	71.967	ENSSMAG00000007429	rnf17	98	71.827	Scophthalmus_maximus
ENSSLDG00000019577	rnf17	99	93.649	ENSSDUG00000013530	rnf17	100	93.649	Seriola_dumerili
ENSSLDG00000019577	rnf17	67	34.397	ENSSARG00000003016	RNF17	57	34.397	Sorex_araneus
ENSSLDG00000019577	rnf17	94	32.662	ENSSPUG00000008917	RNF17	91	32.349	Sphenodon_punctatus
ENSSLDG00000019577	rnf17	97	72.500	ENSSPAG00000001925	rnf17	99	72.448	Stegastes_partitus
ENSSLDG00000019577	rnf17	92	31.712	ENSSSCG00000009572	RNF17	85	31.783	Sus_scrofa
ENSSLDG00000019577	rnf17	61	34.957	ENSTGUG00000011267	-	100	34.957	Taeniopygia_guttata
ENSSLDG00000019577	rnf17	99	53.153	ENSTRUG00000015498	rnf17	90	53.015	Takifugu_rubripes
ENSSLDG00000019577	rnf17	75	58.602	ENSTNIG00000015681	rnf17	92	58.602	Tetraodon_nigroviridis
ENSSLDG00000019577	rnf17	82	32.647	ENSTBEG00000000282	RNF17	72	32.543	Tupaia_belangeri
ENSSLDG00000019577	rnf17	57	43.662	ENSVPAG00000011388	RNF17	69	43.662	Vicugna_pacos
ENSSLDG00000019577	rnf17	95	31.882	ENSVVUG00000006226	RNF17	69	34.741	Vulpes_vulpes
ENSSLDG00000019577	rnf17	70	31.315	ENSXETG00000034020	RNF17	90	31.664	Xenopus_tropicalis
ENSSLDG00000019577	rnf17	99	63.282	ENSXCOG00000018295	rnf17	99	64.186	Xiphophorus_couchianus
ENSSLDG00000019577	rnf17	99	64.821	ENSXMAG00000014747	rnf17	99	65.242	Xiphophorus_maculatus