EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000019660 (Gene tree)
Gene ID: -
Gene Symbol: znf341
Alias: zgc:171837
Full Name: zinc finger protein 341
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 7331 bases
Position: chrPEQF01098791.1:302876-310206
Accession: 111655253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000025295	zf-C2H2	PF00096.26	1.4e-33	1	6
ENSSLDP00000025295	zf-C2H2	PF00096.26	1.4e-33	2	6
ENSSLDP00000025295	zf-C2H2	PF00096.26	1.4e-33	3	6
ENSSLDP00000025295	zf-C2H2	PF00096.26	1.4e-33	4	6
ENSSLDP00000025295	zf-C2H2	PF00096.26	1.4e-33	5	6
ENSSLDP00000025295	zf-C2H2	PF00096.26	1.4e-33	6	6
ENSSLDP00000025295	zf-met	PF12874.7	8.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000026083	-	2535	XM_023406583	ENSSLDP00000025295	844 (aa)	XP_023262351	-

Gene Model

Click here to download ENSSLDG00000019660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000019660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000019660	znf341	51	33.540	ENSSLDG00000018273	-	80	32.500
ENSSLDG00000019660	znf341	50	46.000	ENSSLDG00000020727	-	98	46.000
ENSSLDG00000019660	znf341	50	34.091	ENSSLDG00000017937	-	94	49.091
ENSSLDG00000019660	znf341	52	36.765	ENSSLDG00000000376	-	76	36.765
ENSSLDG00000019660	znf341	64	32.057	ENSSLDG00000006994	-	95	37.500
ENSSLDG00000019660	znf341	50	31.944	ENSSLDG00000007756	-	89	34.586
ENSSLDG00000019660	znf341	50	38.889	ENSSLDG00000007524	-	81	33.333
ENSSLDG00000019660	znf341	55	37.500	ENSSLDG00000013353	prdm5	79	37.500
ENSSLDG00000019660	znf341	50	39.062	ENSSLDG00000013760	-	100	32.143
ENSSLDG00000019660	znf341	50	34.234	ENSSLDG00000023060	-	73	30.804
ENSSLDG00000019660	znf341	55	38.806	ENSSLDG00000003269	znf710b	53	38.806
ENSSLDG00000019660	znf341	50	35.294	ENSSLDG00000018493	-	82	37.313
ENSSLDG00000019660	znf341	59	47.059	ENSSLDG00000024295	ZNF319	90	32.558
ENSSLDG00000019660	znf341	50	31.771	ENSSLDG00000012320	-	99	42.308
ENSSLDG00000019660	znf341	50	38.028	ENSSLDG00000000457	-	77	38.028
ENSSLDG00000019660	znf341	50	43.137	ENSSLDG00000002515	-	69	43.137
ENSSLDG00000019660	znf341	51	37.931	ENSSLDG00000005850	-	92	44.643
ENSSLDG00000019660	znf341	50	34.586	ENSSLDG00000000859	-	89	34.586
ENSSLDG00000019660	znf341	50	42.188	ENSSLDG00000001860	-	72	42.188
ENSSLDG00000019660	znf341	50	31.837	ENSSLDG00000014177	zbtb47b	72	31.837
ENSSLDG00000019660	znf341	57	43.137	ENSSLDG00000025265	znf526	74	41.270
ENSSLDG00000019660	znf341	52	30.970	ENSSLDG00000009821	-	81	30.970
ENSSLDG00000019660	znf341	54	33.628	ENSSLDG00000001787	zbtb24	81	43.137
ENSSLDG00000019660	znf341	50	36.301	ENSSLDG00000021278	-	60	30.034
ENSSLDG00000019660	znf341	53	31.250	ENSSLDG00000020655	-	57	31.250
ENSSLDG00000019660	znf341	53	32.407	ENSSLDG00000020675	-	90	32.407
ENSSLDG00000019660	znf341	65	43.243	ENSSLDG00000012821	znf236	78	43.243
ENSSLDG00000019660	znf341	50	31.667	ENSSLDG00000006724	-	90	44.898

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000019660	znf341	100	78.293	ENSAPOG00000016509	znf341	100	78.504	Acanthochromis_polyacanthus
ENSSLDG00000019660	znf341	100	80.024	ENSACIG00000016180	znf341	100	80.141	Amphilophus_citrinellus
ENSSLDG00000019660	znf341	100	77.836	ENSAOCG00000000960	znf341	98	78.151	Amphiprion_ocellaris
ENSSLDG00000019660	znf341	100	83.897	ENSAPEG00000006358	znf341	100	84.131	Amphiprion_percula
ENSSLDG00000019660	znf341	100	77.566	ENSATEG00000003196	znf341	100	77.989	Anabas_testudineus
ENSSLDG00000019660	znf341	100	76.483	ENSACLG00000014349	znf341	100	76.268	Astatotilapia_calliptera
ENSSLDG00000019660	znf341	84	73.087	ENSAMXG00000016921	znf341	97	70.038	Astyanax_mexicanus
ENSSLDG00000019660	znf341	99	73.821	ENSCSEG00000003536	znf341	99	73.263	Cynoglossus_semilaevis
ENSSLDG00000019660	znf341	94	73.059	ENSCVAG00000016325	znf341	94	75.783	Cyprinodon_variegatus
ENSSLDG00000019660	znf341	92	67.794	ENSDARG00000103725	znf341	96	69.250	Danio_rerio
ENSSLDG00000019660	znf341	92	74.754	ENSELUG00000018438	znf341	97	74.574	Esox_lucius
ENSSLDG00000019660	znf341	100	71.383	ENSFHEG00000009763	znf341	99	75.965	Fundulus_heteroclitus
ENSSLDG00000019660	znf341	100	71.382	ENSGAFG00000020131	znf341	100	71.598	Gambusia_affinis
ENSSLDG00000019660	znf341	100	76.293	ENSHBUG00000012828	znf341	100	76.078	Haplochromis_burtoni
ENSSLDG00000019660	znf341	95	79.101	ENSHCOG00000004879	znf341	98	79.925	Hippocampus_comes
ENSSLDG00000019660	znf341	87	69.673	ENSIPUG00000002075	znf341	97	67.790	Ictalurus_punctatus
ENSSLDG00000019660	znf341	100	73.186	ENSKMAG00000006686	znf341	100	72.899	Kryptolebias_marmoratus
ENSSLDG00000019660	znf341	100	75.105	ENSLBEG00000016666	znf341	100	76.180	Labrus_bergylta
ENSSLDG00000019660	znf341	94	68.945	ENSLOCG00000000947	znf341	92	73.136	Lepisosteus_oculatus
ENSSLDG00000019660	znf341	100	96.319	ENSMAMG00000008000	znf341	100	79.651	Mastacembelus_armatus
ENSSLDG00000019660	znf341	100	76.591	ENSMZEG00005021851	znf341	100	76.375	Maylandia_zebra
ENSSLDG00000019660	znf341	85	82.740	ENSMMOG00000019626	znf341	94	82.603	Mola_mola
ENSSLDG00000019660	znf341	83	58.745	ENSMODG00000002856	ZNF341	87	60.992	Monodelphis_domestica
ENSSLDG00000019660	znf341	85	82.272	ENSMALG00000006492	znf341	97	82.397	Monopterus_albus
ENSSLDG00000019660	znf341	100	79.841	ENSNBRG00000019550	znf341	100	79.615	Neolamprologus_brichardi
ENSSLDG00000019660	znf341	100	77.754	ENSONIG00000009210	znf341	96	84.887	Oreochromis_niloticus
ENSSLDG00000019660	znf341	95	76.421	ENSORLG00000000956	znf341	91	80.289	Oryzias_latipes
ENSSLDG00000019660	znf341	88	84.110	ENSORLG00020004162	znf341	100	69.765	Oryzias_latipes_hni
ENSSLDG00000019660	znf341	95	76.341	ENSORLG00015018360	znf341	100	73.696	Oryzias_latipes_hsok
ENSSLDG00000019660	znf341	100	72.210	ENSOMEG00000014403	znf341	100	71.996	Oryzias_melastigma
ENSSLDG00000019660	znf341	98	69.222	ENSPKIG00000023946	znf341	87	76.269	Paramormyrops_kingsleyae
ENSSLDG00000019660	znf341	100	71.948	ENSPMGG00000014849	znf341	100	71.212	Periophthalmus_magnuspinnatus
ENSSLDG00000019660	znf341	100	70.797	ENSPFOG00000013875	znf341	98	78.761	Poecilia_formosa
ENSSLDG00000019660	znf341	100	70.905	ENSPLAG00000014192	znf341	93	75.089	Poecilia_latipinna
ENSSLDG00000019660	znf341	100	70.950	ENSPMEG00000020155	znf341	93	75.148	Poecilia_mexicana
ENSSLDG00000019660	znf341	100	71.848	ENSPREG00000001388	znf341	93	75.924	Poecilia_reticulata
ENSSLDG00000019660	znf341	100	81.659	ENSPNYG00000015106	znf341	100	81.308	Pundamilia_nyererei
ENSSLDG00000019660	znf341	82	75.783	ENSPNAG00000027229	znf341	96	71.355	Pygocentrus_nattereri
ENSSLDG00000019660	znf341	84	76.033	ENSSFOG00015014678	znf341	89	72.610	Scleropages_formosus
ENSSLDG00000019660	znf341	100	94.479	ENSSMAG00000006473	znf341	94	94.479	Scophthalmus_maximus
ENSSLDG00000019660	znf341	100	97.527	ENSSDUG00000014540	znf341	100	97.527	Seriola_dumerili
ENSSLDG00000019660	znf341	95	74.834	ENSTRUG00000011385	znf341	99	75.055	Takifugu_rubripes
ENSSLDG00000019660	znf341	83	81.916	ENSTNIG00000005051	znf341	100	81.916	Tetraodon_nigroviridis
ENSSLDG00000019660	znf341	71	82.154	ENSXCOG00000000036	znf341	91	81.005	Xiphophorus_couchianus
ENSSLDG00000019660	znf341	100	72.198	ENSXMAG00000014133	znf341	100	72.306	Xiphophorus_maculatus