EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000020070 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix protein 3-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 77010 bases
Position: chrPEQF01099060.1:2962218-3039227
Accession: 111663959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000025791	cwf21	PF08312.12	3.6e-15	1	1
ENSSLDP00000025791	SRRM_C	PF15230.6	1.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000026587	SRRM3-201	6931	XM_023418375	ENSSLDP00000025791	662 (aa)	XP_023274143	UPI000C6F8834

Gene Model

Click here to download ENSSLDG00000020070's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020070's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020070	SRRM3	87	86.724	ENSAPOG00000000288	SRRM3	88	85.862	Acanthochromis_polyacanthus
ENSSLDG00000020070	SRRM3	87	79.585	ENSACLG00000005269	SRRM3	87	78.893	Astatotilapia_calliptera
ENSSLDG00000020070	SRRM3	87	55.537	ENSAMXG00000016051	-	87	57.358	Astyanax_mexicanus
ENSSLDG00000020070	SRRM3	87	45.219	ENSCPBG00000027784	SRRM3	84	45.985	Chrysemys_picta_bellii
ENSSLDG00000020070	SRRM3	87	77.241	ENSCSEG00000010978	-	80	76.724	Cynoglossus_semilaevis
ENSSLDG00000020070	SRRM3	87	79.758	ENSGAFG00000014777	SRRM3	87	79.412	Gambusia_affinis
ENSSLDG00000020070	SRRM3	87	46.388	ENSGAGG00000021058	SRRM3	92	44.797	Gopherus_agassizii
ENSSLDG00000020070	SRRM3	87	79.965	ENSHBUG00000005061	SRRM3	87	79.412	Haplochromis_burtoni
ENSSLDG00000020070	SRRM3	87	54.698	ENSIPUG00000012467	srrm3	87	53.120	Ictalurus_punctatus
ENSSLDG00000020070	SRRM3	88	79.863	ENSKMAG00000013495	SRRM3	87	79.690	Kryptolebias_marmoratus
ENSSLDG00000020070	SRRM3	73	43.785	ENSLACG00000008008	SRRM3	96	40.301	Latimeria_chalumnae
ENSSLDG00000020070	SRRM3	52	58.424	ENSLOCG00000002879	SRRM3	98	58.127	Lepisosteus_oculatus
ENSSLDG00000020070	SRRM3	89	82.601	ENSMALG00000000844	-	89	82.180	Monopterus_albus
ENSSLDG00000020070	SRRM3	53	65.940	ENSONIG00000012732	-	97	55.772	Oreochromis_niloticus
ENSSLDG00000020070	SRRM3	88	76.501	ENSORLG00000026242	-	89	76.857	Oryzias_latipes
ENSSLDG00000020070	SRRM3	88	76.501	ENSORLG00020016592	-	89	76.857	Oryzias_latipes_hni
ENSSLDG00000020070	SRRM3	88	76.329	ENSORLG00015022712	SRRM3	89	76.684	Oryzias_latipes_hsok
ENSSLDG00000020070	SRRM3	88	75.815	ENSOMEG00000010768	-	88	75.475	Oryzias_melastigma
ENSSLDG00000020070	SRRM3	87	53.783	ENSPKIG00000017233	SRRM3	92	53.630	Paramormyrops_kingsleyae
ENSSLDG00000020070	SRRM3	52	44.809	ENSPSIG00000007850	SRRM3	57	40.885	Pelodiscus_sinensis
ENSSLDG00000020070	SRRM3	87	59.437	ENSPFOG00000009007	SRRM3	89	54.319	Poecilia_formosa
ENSSLDG00000020070	SRRM3	87	78.893	ENSPMEG00000011981	-	87	78.547	Poecilia_mexicana
ENSSLDG00000020070	SRRM3	87	80.104	ENSPREG00000008138	-	87	79.758	Poecilia_reticulata
ENSSLDG00000020070	SRRM3	87	56.544	ENSPNAG00000009621	SRRM3	87	57.525	Pygocentrus_nattereri
ENSSLDG00000020070	SRRM3	56	56.404	ENSSFOG00015001696	SRRM3	92	57.357	Scleropages_formosus
ENSSLDG00000020070	SRRM3	87	87.543	ENSSMAG00000000476	SRRM3	88	87.543	Scophthalmus_maximus
ENSSLDG00000020070	SRRM3	87	78.893	ENSXMAG00000005663	-	87	78.547	Xiphophorus_maculatus