EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000020099 (Gene tree)
Gene ID: -
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 9656 bases
Position: chrPEQF01098667.1:1327255-1336910
Accession: 111653345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000025837	RRM_1	PF00076.22	4.8e-55	1	3
ENSSLDP00000025837	RRM_1	PF00076.22	4.8e-55	2	3
ENSSLDP00000025837	RRM_1	PF00076.22	4.8e-55	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000026634	-	4990	XM_023403893	ENSSLDP00000025837	774 (aa)	XP_023259661	UPI000C6F5473

Gene Model

Click here to download ENSSLDG00000020099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020099	rbm28	100	50.510	ENSG00000106344	RBM28	100	47.059	Homo_sapiens
ENSSLDG00000020099	rbm28	57	81.222	ENSAPOG00000015512	rbm28	100	73.290	Acanthochromis_polyacanthus
ENSSLDG00000020099	rbm28	97	55.172	ENSAMEG00000004776	RBM28	64	56.140	Ailuropoda_melanoleuca
ENSSLDG00000020099	rbm28	56	76.047	ENSACIG00000023153	rbm28	91	76.047	Amphilophus_citrinellus
ENSSLDG00000020099	rbm28	57	81.222	ENSAOCG00000000462	rbm28	100	73.806	Amphiprion_ocellaris
ENSSLDG00000020099	rbm28	100	73.677	ENSAPEG00000012996	rbm28	100	73.419	Amphiprion_percula
ENSSLDG00000020099	rbm28	100	50.193	ENSANAG00000033922	RBM28	78	57.500	Aotus_nancymaae
ENSSLDG00000020099	rbm28	100	70.103	ENSACLG00000025024	rbm28	100	69.716	Astatotilapia_calliptera
ENSSLDG00000020099	rbm28	58	59.284	ENSAMXG00000000763	rbm28	99	59.284	Astyanax_mexicanus
ENSSLDG00000020099	rbm28	63	57.500	ENSBTAG00000017001	RBM28	79	57.500	Bos_taurus
ENSSLDG00000020099	rbm28	100	50.387	ENSCJAG00000017731	RBM28	82	54.464	Callithrix_jacchus
ENSSLDG00000020099	rbm28	100	49.433	ENSCAFG00000001667	RBM28	58	55.310	Canis_familiaris
ENSSLDG00000020099	rbm28	100	49.433	ENSCAFG00020021648	RBM28	58	55.310	Canis_lupus_dingo
ENSSLDG00000020099	rbm28	62	53.799	ENSCHIG00000014146	RBM28	59	55.580	Capra_hircus
ENSSLDG00000020099	rbm28	82	55.000	ENSTSYG00000002892	RBM28	80	55.531	Carlito_syrichta
ENSSLDG00000020099	rbm28	83	40.769	ENSCAPG00000013218	RBM28	77	64.356	Cavia_aperea
ENSSLDG00000020099	rbm28	100	50.192	ENSCPOG00000006253	RBM28	58	55.973	Cavia_porcellus
ENSSLDG00000020099	rbm28	68	57.500	ENSCCAG00000035105	RBM28	77	57.500	Cebus_capucinus
ENSSLDG00000020099	rbm28	100	50.000	ENSCATG00000040497	RBM28	77	57.500	Cercocebus_atys
ENSSLDG00000020099	rbm28	63	53.144	ENSCLAG00000003707	RBM28	61	55.310	Chinchilla_lanigera
ENSSLDG00000020099	rbm28	100	50.064	ENSCSAG00000010161	RBM28	58	55.679	Chlorocebus_sabaeus
ENSSLDG00000020099	rbm28	56	55.200	ENSCHOG00000001994	-	63	54.400	Choloepus_hoffmanni
ENSSLDG00000020099	rbm28	52	51.339	ENSCPBG00000018088	RBM28	76	53.563	Chrysemys_picta_bellii
ENSSLDG00000020099	rbm28	68	39.241	ENSCING00000009238	-	61	40.000	Ciona_intestinalis
ENSSLDG00000020099	rbm28	87	51.636	ENSCANG00000038397	RBM28	70	64.789	Colobus_angolensis_palliatus
ENSSLDG00000020099	rbm28	65	53.360	ENSCGRG00001021278	Rbm28	56	56.637	Cricetulus_griseus_chok1gshd
ENSSLDG00000020099	rbm28	100	51.207	ENSCGRG00000005098	Rbm28	58	56.637	Cricetulus_griseus_crigri
ENSSLDG00000020099	rbm28	100	68.299	ENSCSEG00000004212	rbm28	100	67.784	Cynoglossus_semilaevis
ENSSLDG00000020099	rbm28	59	75.276	ENSCVAG00000010493	rbm28	99	67.183	Cyprinodon_variegatus
ENSSLDG00000020099	rbm28	100	52.402	ENSDARG00000025332	rbm28	78	60.626	Danio_rerio
ENSSLDG00000020099	rbm28	100	50.385	ENSDNOG00000001124	RBM28	58	55.310	Dasypus_novemcinctus
ENSSLDG00000020099	rbm28	65	52.684	ENSDORG00000004184	Rbm28	86	55.408	Dipodomys_ordii
ENSSLDG00000020099	rbm28	85	44.898	ENSEBUG00000004419	rbm28	94	42.404	Eptatretus_burgeri
ENSSLDG00000020099	rbm28	66	52.930	ENSEASG00005008528	RBM28	57	55.850	Equus_asinus_asinus
ENSSLDG00000020099	rbm28	66	52.734	ENSECAG00000007745	RBM28	57	55.629	Equus_caballus
ENSSLDG00000020099	rbm28	100	46.724	ENSEEUG00000002389	RBM28	58	50.993	Erinaceus_europaeus
ENSSLDG00000020099	rbm28	100	59.241	ENSELUG00000020602	rbm28	59	66.311	Esox_lucius
ENSSLDG00000020099	rbm28	100	49.874	ENSFCAG00000000946	RBM28	79	57.500	Felis_catus
ENSSLDG00000020099	rbm28	100	50.127	ENSFDAG00000010169	RBM28	59	56.195	Fukomys_damarensis
ENSSLDG00000020099	rbm28	99	55.974	ENSGMOG00000007091	rbm28	94	62.361	Gadus_morhua
ENSSLDG00000020099	rbm28	59	71.806	ENSGAFG00000004802	rbm28	98	72.467	Gambusia_affinis
ENSSLDG00000020099	rbm28	57	76.629	ENSGACG00000012612	rbm28	100	66.121	Gasterosteus_aculeatus
ENSSLDG00000020099	rbm28	82	57.214	ENSGAGG00000008873	RBM28	89	62.567	Gopherus_agassizii
ENSSLDG00000020099	rbm28	95	49.866	ENSGGOG00000004644	RBM28	59	55.902	Gorilla_gorilla
ENSSLDG00000020099	rbm28	95	70.340	ENSHBUG00000009611	rbm28	99	69.932	Haplochromis_burtoni
ENSSLDG00000020099	rbm28	100	50.063	ENSHGLG00000005409	RBM28	59	55.234	Heterocephalus_glaber_female
ENSSLDG00000020099	rbm28	100	50.063	ENSHGLG00100016458	RBM28	59	55.234	Heterocephalus_glaber_male
ENSSLDG00000020099	rbm28	86	55.654	ENSHCOG00000010597	rbm28	90	55.432	Hippocampus_comes
ENSSLDG00000020099	rbm28	60	47.109	ENSIPUG00000007103	rbm28	81	49.192	Ictalurus_punctatus
ENSSLDG00000020099	rbm28	67	52.692	ENSSTOG00000002169	RBM28	57	55.604	Ictidomys_tridecemlineatus
ENSSLDG00000020099	rbm28	79	57.459	ENSJJAG00000022400	Rbm28	90	55.734	Jaculus_jaculus
ENSSLDG00000020099	rbm28	58	75.442	ENSKMAG00000013348	rbm28	59	75.442	Kryptolebias_marmoratus
ENSSLDG00000020099	rbm28	59	77.925	ENSLBEG00000012998	rbm28	100	69.936	Labrus_bergylta
ENSSLDG00000020099	rbm28	100	57.868	ENSLOCG00000015541	rbm28	100	61.856	Lepisosteus_oculatus
ENSSLDG00000020099	rbm28	100	49.617	ENSLAFG00000010717	RBM28	58	54.867	Loxodonta_africana
ENSSLDG00000020099	rbm28	100	49.873	ENSMFAG00000031036	RBM28	77	57.500	Macaca_fascicularis
ENSSLDG00000020099	rbm28	69	57.500	ENSMMUG00000007250	RBM28	77	57.500	Macaca_mulatta
ENSSLDG00000020099	rbm28	100	50.064	ENSMNEG00000036970	RBM28	76	57.500	Macaca_nemestrina
ENSSLDG00000020099	rbm28	100	73.419	ENSMAMG00000008525	rbm28	100	72.258	Mastacembelus_armatus
ENSSLDG00000020099	rbm28	93	69.848	ENSMZEG00005019625	rbm28	100	69.433	Maylandia_zebra
ENSSLDG00000020099	rbm28	66	51.852	ENSMAUG00000002263	Rbm28	56	55.432	Mesocricetus_auratus
ENSSLDG00000020099	rbm28	64	53.908	ENSMICG00000000107	RBM28	60	57.016	Microcebus_murinus
ENSSLDG00000020099	rbm28	100	49.246	ENSMOCG00000014615	Rbm28	59	55.507	Microtus_ochrogaster
ENSSLDG00000020099	rbm28	62	67.296	ENSMMOG00000008600	rbm28	91	69.778	Mola_mola
ENSSLDG00000020099	rbm28	62	54.054	ENSMODG00000015151	RBM28	58	55.088	Monodelphis_domestica
ENSSLDG00000020099	rbm28	59	79.912	ENSMALG00000006419	rbm28	100	73.393	Monopterus_albus
ENSSLDG00000020099	rbm28	63	54.878	MGP_CAROLIEiJ_G0028162	Rbm28	59	56.360	Mus_caroli
ENSSLDG00000020099	rbm28	100	51.028	ENSMUSG00000029701	Rbm28	58	56.889	Mus_musculus
ENSSLDG00000020099	rbm28	100	50.765	MGP_PahariEiJ_G0021920	Rbm28	58	56.264	Mus_pahari
ENSSLDG00000020099	rbm28	100	50.771	MGP_SPRETEiJ_G0029162	Rbm28	58	56.444	Mus_spretus
ENSSLDG00000020099	rbm28	100	50.064	ENSMPUG00000006511	RBM28	58	56.167	Mustela_putorius_furo
ENSSLDG00000020099	rbm28	64	53.200	ENSMLUG00000002186	RBM28	58	55.188	Myotis_lucifugus
ENSSLDG00000020099	rbm28	100	49.616	ENSNGAG00000006480	-	59	55.556	Nannospalax_galili
ENSSLDG00000020099	rbm28	100	48.329	ENSNGAG00000017946	-	58	54.646	Nannospalax_galili
ENSSLDG00000020099	rbm28	69	57.500	ENSNLEG00000012307	RBM28	77	57.500	Nomascus_leucogenys
ENSSLDG00000020099	rbm28	81	59.748	ENSMEUG00000009611	RBM28	83	59.748	Notamacropus_eugenii
ENSSLDG00000020099	rbm28	64	50.803	ENSODEG00000003213	-	57	52.212	Octodon_degus
ENSSLDG00000020099	rbm28	74	57.000	ENSODEG00000013217	-	83	57.035	Octodon_degus
ENSSLDG00000020099	rbm28	100	71.026	ENSONIG00000014924	rbm28	100	71.026	Oreochromis_niloticus
ENSSLDG00000020099	rbm28	64	45.000	ENSOANG00000000815	-	61	45.657	Ornithorhynchus_anatinus
ENSSLDG00000020099	rbm28	64	53.400	ENSOCUG00000003009	RBM28	57	56.512	Oryctolagus_cuniculus
ENSSLDG00000020099	rbm28	99	66.408	ENSORLG00000009636	rbm28	59	74.779	Oryzias_latipes
ENSSLDG00000020099	rbm28	59	75.276	ENSORLG00020002123	rbm28	59	75.221	Oryzias_latipes_hni
ENSSLDG00000020099	rbm28	84	74.000	ENSORLG00015015030	rbm28	97	74.000	Oryzias_latipes_hsok
ENSSLDG00000020099	rbm28	59	75.771	ENSOMEG00000007801	rbm28	60	75.771	Oryzias_melastigma
ENSSLDG00000020099	rbm28	82	55.000	ENSOGAG00000006011	RBM28	76	56.222	Otolemur_garnettii
ENSSLDG00000020099	rbm28	100	50.312	ENSOARG00000002547	RBM28	59	56.018	Ovis_aries
ENSSLDG00000020099	rbm28	100	50.826	ENSPPAG00000041730	RBM28	77	57.500	Pan_paniscus
ENSSLDG00000020099	rbm28	100	49.116	ENSPPRG00000004420	RBM28	79	57.500	Panthera_pardus
ENSSLDG00000020099	rbm28	100	49.495	ENSPTIG00000008550	RBM28	79	57.500	Panthera_tigris_altaica
ENSSLDG00000020099	rbm28	100	50.636	ENSPTRG00000019659	RBM28	77	57.500	Pan_troglodytes
ENSSLDG00000020099	rbm28	69	57.500	ENSPANG00000022295	RBM28	77	57.500	Papio_anubis
ENSSLDG00000020099	rbm28	99	53.865	ENSPKIG00000023453	rbm28	62	57.669	Paramormyrops_kingsleyae
ENSSLDG00000020099	rbm28	91	67.742	ENSPMGG00000012840	rbm28	94	68.282	Periophthalmus_magnuspinnatus
ENSSLDG00000020099	rbm28	100	48.604	ENSPCIG00000012810	RBM28	73	59.008	Phascolarctos_cinereus
ENSSLDG00000020099	rbm28	100	64.698	ENSPFOG00000018209	rbm28	59	72.907	Poecilia_formosa
ENSSLDG00000020099	rbm28	58	72.545	ENSPLAG00000016078	rbm28	56	72.483	Poecilia_latipinna
ENSSLDG00000020099	rbm28	100	64.487	ENSPMEG00000004292	rbm28	59	72.687	Poecilia_mexicana
ENSSLDG00000020099	rbm28	58	71.903	ENSPREG00000014287	rbm28	75	71.840	Poecilia_reticulata
ENSSLDG00000020099	rbm28	100	50.512	ENSPPYG00000017975	RBM28	58	55.902	Pongo_abelii
ENSSLDG00000020099	rbm28	72	52.066	ENSPCAG00000008223	RBM28	82	51.892	Procavia_capensis
ENSSLDG00000020099	rbm28	69	57.500	ENSPCOG00000016797	RBM28	76	57.500	Propithecus_coquereli
ENSSLDG00000020099	rbm28	69	62.500	ENSPVAG00000005443	RBM28	67	65.174	Pteropus_vampyrus
ENSSLDG00000020099	rbm28	100	70.232	ENSPNYG00000014003	rbm28	100	69.459	Pundamilia_nyererei
ENSSLDG00000020099	rbm28	100	49.042	ENSRNOG00000005468	Rbm28	58	55.895	Rattus_norvegicus
ENSSLDG00000020099	rbm28	100	50.127	ENSRBIG00000033990	RBM28	77	57.500	Rhinopithecus_bieti
ENSSLDG00000020099	rbm28	69	57.500	ENSRROG00000040747	RBM28	77	57.500	Rhinopithecus_roxellana
ENSSLDG00000020099	rbm28	91	42.754	ENSSBOG00000012308	RBM28	77	54.237	Saimiri_boliviensis_boliviensis
ENSSLDG00000020099	rbm28	96	48.271	ENSSHAG00000017017	RBM28	59	55.505	Sarcophilus_harrisii
ENSSLDG00000020099	rbm28	57	61.969	ENSSFOG00015001231	rbm28	60	61.969	Scleropages_formosus
ENSSLDG00000020099	rbm28	67	66.603	ENSSMAG00000003885	rbm28	90	72.527	Scophthalmus_maximus
ENSSLDG00000020099	rbm28	63	96.945	ENSSDUG00000014270	rbm28	96	96.945	Seriola_dumerili
ENSSLDG00000020099	rbm28	74	60.957	ENSSARG00000008303	RBM28	80	61.209	Sorex_araneus
ENSSLDG00000020099	rbm28	66	63.235	ENSSPUG00000000838	RBM28	80	63.235	Sphenodon_punctatus
ENSSLDG00000020099	rbm28	57	81.124	ENSSPAG00000023305	rbm28	100	72.442	Stegastes_partitus
ENSSLDG00000020099	rbm28	100	49.689	ENSSSCG00000031847	RBM28	59	55.799	Sus_scrofa
ENSSLDG00000020099	rbm28	100	63.995	ENSTRUG00000013311	rbm28	99	63.868	Takifugu_rubripes
ENSSLDG00000020099	rbm28	82	56.962	ENSTBEG00000012749	RBM28	84	55.752	Tupaia_belangeri
ENSSLDG00000020099	rbm28	61	54.717	ENSTTRG00000013647	RBM28	59	55.677	Tursiops_truncatus
ENSSLDG00000020099	rbm28	100	46.954	ENSUAMG00000006949	RBM28	88	54.978	Ursus_americanus
ENSSLDG00000020099	rbm28	100	49.808	ENSUMAG00000005997	RBM28	58	55.973	Ursus_maritimus
ENSSLDG00000020099	rbm28	85	46.119	ENSVPAG00000008304	RBM28	73	64.286	Vicugna_pacos
ENSSLDG00000020099	rbm28	100	49.617	ENSVVUG00000007270	RBM28	58	55.507	Vulpes_vulpes
ENSSLDG00000020099	rbm28	99	46.411	ENSXETG00000009271	rbm28	57	52.434	Xenopus_tropicalis
ENSSLDG00000020099	rbm28	59	67.401	ENSXCOG00000020357	rbm28	92	67.699	Xiphophorus_couchianus
ENSSLDG00000020099	rbm28	58	71.938	ENSXMAG00000004415	rbm28	59	71.938	Xiphophorus_maculatus