EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000020104 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: helicase with zinc finger 2
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 17631 bases
Position: chrPEQF01099227.1:5821250-5838880
Accession: 111668659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000025927	RNB	PF00773.19	2.5e-55	1	1
ENSSLDP00000025888	RNB	PF00773.19	4.1e-55	1	1
ENSSLDP00000025927	ResIII	PF04851.15	1.9e-08	1	1
ENSSLDP00000025888	ResIII	PF04851.15	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000026685	-	8187	-	ENSSLDP00000025888	2728 (aa)	-	-
ENSSLDT00000026724	-	8343	XM_023424769	ENSSLDP00000025927	2194 (aa)	XP_023280537	-

Gene Model

Click here to download ENSSLDG00000020104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020104's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020104	-	99	70.337	ENSAPOG00000023564	-	99	68.620	Acanthochromis_polyacanthus
ENSSLDG00000020104	-	99	68.258	ENSACIG00000009644	-	97	76.600	Amphilophus_citrinellus
ENSSLDG00000020104	-	99	71.676	ENSAOCG00000005001	-	99	69.838	Amphiprion_ocellaris
ENSSLDG00000020104	-	99	71.448	ENSAPEG00000002204	-	99	69.659	Amphiprion_percula
ENSSLDG00000020104	-	99	75.672	ENSATEG00000002831	-	99	72.884	Anabas_testudineus
ENSSLDG00000020104	-	99	70.191	ENSACLG00000026636	-	99	69.676	Astatotilapia_calliptera
ENSSLDG00000020104	-	99	58.735	ENSCSEG00000013505	-	99	57.706	Cynoglossus_semilaevis
ENSSLDG00000020104	-	98	62.707	ENSCVAG00000009143	-	97	62.707	Cyprinodon_variegatus
ENSSLDG00000020104	-	99	55.295	ENSGMOG00000015715	-	100	53.333	Gadus_morhua
ENSSLDG00000020104	-	99	66.606	ENSGACG00000011518	-	99	65.451	Gasterosteus_aculeatus
ENSSLDG00000020104	-	99	70.100	ENSHBUG00000011353	-	99	67.695	Haplochromis_burtoni
ENSSLDG00000020104	-	99	68.383	ENSKMAG00000017824	-	99	66.127	Kryptolebias_marmoratus
ENSSLDG00000020104	-	99	65.763	ENSLBEG00000004602	-	98	65.694	Labrus_bergylta
ENSSLDG00000020104	-	99	72.860	ENSMAMG00000023766	-	99	70.054	Mastacembelus_armatus
ENSSLDG00000020104	-	99	70.327	ENSMZEG00005005021	-	99	67.838	Maylandia_zebra
ENSSLDG00000020104	-	99	77.271	ENSMALG00000015934	-	99	75.000	Monopterus_albus
ENSSLDG00000020104	-	99	65.949	ENSNBRG00000018910	-	99	65.912	Neolamprologus_brichardi
ENSSLDG00000020104	-	99	67.828	ENSONIG00000003110	-	99	66.392	Oreochromis_niloticus
ENSSLDG00000020104	-	99	62.466	ENSORLG00000010672	-	99	60.705	Oryzias_latipes
ENSSLDG00000020104	-	99	62.420	ENSORLG00020004477	-	99	60.453	Oryzias_latipes_hni
ENSSLDG00000020104	-	99	62.648	ENSORLG00015022035	-	99	60.885	Oryzias_latipes_hsok
ENSSLDG00000020104	-	99	60.427	ENSOMEG00000001349	-	99	58.921	Oryzias_melastigma
ENSSLDG00000020104	-	99	61.883	ENSPFOG00000001606	-	99	62.063	Poecilia_formosa
ENSSLDG00000020104	-	99	58.463	ENSPLAG00000011020	-	98	58.172	Poecilia_latipinna
ENSSLDG00000020104	-	99	62.773	ENSPMEG00000014289	-	99	61.211	Poecilia_mexicana
ENSSLDG00000020104	-	99	59.982	ENSPREG00000013870	-	99	59.516	Poecilia_reticulata
ENSSLDG00000020104	-	99	70.100	ENSPNYG00000007526	-	99	67.695	Pundamilia_nyererei
ENSSLDG00000020104	-	99	94.970	ENSSDUG00000007057	-	99	91.017	Seriola_dumerili
ENSSLDG00000020104	-	99	71.403	ENSSPAG00000003658	-	99	69.788	Stegastes_partitus
ENSSLDG00000020104	-	88	60.442	ENSTRUG00000009427	-	98	60.442	Takifugu_rubripes
ENSSLDG00000020104	-	99	61.876	ENSTNIG00000003119	-	100	59.091	Tetraodon_nigroviridis
ENSSLDG00000020104	-	99	59.803	ENSXCOG00000003833	-	99	58.728	Xiphophorus_couchianus
ENSSLDG00000020104	-	99	59.720	ENSXMAG00000009019	-	99	58.719	Xiphophorus_maculatus