EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000020163 (Gene tree)
Gene ID: -
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2951 bases
Position: chrPEQF01099045.1:489208-492158
Accession: 111662600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000025961	zf-C2H2	PF00096.26	8.2e-30	1	6
ENSSLDP00000025961	zf-C2H2	PF00096.26	8.2e-30	2	6
ENSSLDP00000025961	zf-C2H2	PF00096.26	8.2e-30	3	6
ENSSLDP00000025961	zf-C2H2	PF00096.26	8.2e-30	4	6
ENSSLDP00000025961	zf-C2H2	PF00096.26	8.2e-30	5	6
ENSSLDP00000025961	zf-C2H2	PF00096.26	8.2e-30	6	6
ENSSLDP00000026008	zf-C2H2	PF00096.26	3.9e-18	1	4
ENSSLDP00000026008	zf-C2H2	PF00096.26	3.9e-18	2	4
ENSSLDP00000026008	zf-C2H2	PF00096.26	3.9e-18	3	4
ENSSLDP00000026008	zf-C2H2	PF00096.26	3.9e-18	4	4
ENSSLDP00000025961	zf-met	PF12874.7	7.2e-08	1	2
ENSSLDP00000025961	zf-met	PF12874.7	7.2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000026758	-	1128	XM_023416511	ENSSLDP00000025961	375 (aa)	XP_023272279	-
ENSSLDT00000026803	-	1128	-	ENSSLDP00000026008	375 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000020163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000020163	gfi1ab	100	50.260	ENSSLDG00000013823	gfi1b	100	50.000
ENSSLDG00000020163	gfi1ab	50	46.296	ENSSLDG00000018598	-	85	51.579
ENSSLDG00000020163	gfi1ab	94	50.495	ENSSLDG00000020675	-	97	53.165
ENSSLDG00000020163	gfi1ab	54	35.758	ENSSLDG00000011849	-	59	35.758
ENSSLDG00000020163	gfi1ab	50	44.079	ENSSLDG00000010390	-	83	51.579
ENSSLDG00000020163	gfi1ab	50	37.500	ENSSLDG00000000859	-	85	44.037
ENSSLDG00000020163	gfi1ab	50	41.146	ENSSLDG00000020455	-	88	41.146
ENSSLDG00000020163	gfi1ab	52	42.857	ENSSLDG00000006994	-	94	42.857
ENSSLDG00000020163	gfi1ab	61	44.565	ENSSLDG00000006288	-	95	42.384
ENSSLDG00000020163	gfi1ab	99	35.417	ENSSLDG00000013565	scrt2	95	35.417
ENSSLDG00000020163	gfi1ab	100	63.753	ENSSLDG00000016512	gfi1aa	100	63.753
ENSSLDG00000020163	gfi1ab	53	40.909	ENSSLDG00000018521	znf646	59	40.909
ENSSLDG00000020163	gfi1ab	50	44.898	ENSSLDG00000012320	-	95	49.438
ENSSLDG00000020163	gfi1ab	53	38.542	ENSSLDG00000005999	-	51	38.542
ENSSLDG00000020163	gfi1ab	56	49.123	ENSSLDG00000007756	-	92	49.123
ENSSLDG00000020163	gfi1ab	51	43.452	ENSSLDG00000016317	-	87	43.452
ENSSLDG00000020163	gfi1ab	50	47.586	ENSSLDG00000007524	-	70	50.459
ENSSLDG00000020163	gfi1ab	52	41.250	ENSSLDG00000005839	-	61	46.602
ENSSLDG00000020163	gfi1ab	64	42.342	ENSSLDG00000000457	-	72	45.455
ENSSLDG00000020163	gfi1ab	69	41.250	ENSSLDG00000000352	-	80	41.250
ENSSLDG00000020163	gfi1ab	50	42.262	ENSSLDG00000017937	-	95	48.214
ENSSLDG00000020163	gfi1ab	63	45.161	ENSSLDG00000012821	znf236	60	45.161
ENSSLDG00000020163	gfi1ab	50	40.816	ENSSLDG00000015116	-	73	44.578
ENSSLDG00000020163	gfi1ab	51	45.946	ENSSLDG00000005850	-	93	56.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020163	gfi1ab	100	61.882	ENSG00000162676	GFI1	100	62.441	Homo_sapiens
ENSSLDG00000020163	gfi1ab	100	84.694	ENSAPOG00000015189	gfi1ab	100	84.439	Acanthochromis_polyacanthus
ENSSLDG00000020163	gfi1ab	50	90.526	ENSAMEG00000013858	-	99	90.526	Ailuropoda_melanoleuca
ENSSLDG00000020163	gfi1ab	100	85.263	ENSACIG00000016354	gfi1ab	100	85.000	Amphilophus_citrinellus
ENSSLDG00000020163	gfi1ab	100	77.895	ENSAOCG00000008339	gfi1ab	100	77.895	Amphiprion_ocellaris
ENSSLDG00000020163	gfi1ab	100	84.439	ENSAPEG00000023870	gfi1ab	100	84.184	Amphiprion_percula
ENSSLDG00000020163	gfi1ab	100	82.597	ENSATEG00000009167	gfi1ab	89	82.338	Anabas_testudineus
ENSSLDG00000020163	gfi1ab	88	64.756	ENSAPLG00000015700	GFI1	99	64.756	Anas_platyrhynchos
ENSSLDG00000020163	gfi1ab	100	64.356	ENSACAG00000004498	GFI1	100	64.604	Anolis_carolinensis
ENSSLDG00000020163	gfi1ab	100	62.972	ENSANAG00000019656	GFI1	100	62.441	Aotus_nancymaae
ENSSLDG00000020163	gfi1ab	100	85.271	ENSACLG00000026458	gfi1ab	93	85.013	Astatotilapia_calliptera
ENSSLDG00000020163	gfi1ab	100	63.797	ENSAMXG00000039600	gfi1ab	100	63.544	Astyanax_mexicanus
ENSSLDG00000020163	gfi1ab	100	53.525	ENSAMXG00000006669	GFI1	98	65.789	Astyanax_mexicanus
ENSSLDG00000020163	gfi1ab	61	52.632	ENSAMXG00000015228	-	51	84.112	Astyanax_mexicanus
ENSSLDG00000020163	gfi1ab	100	62.648	ENSBTAG00000016723	GFI1	100	62.884	Bos_taurus
ENSSLDG00000020163	gfi1ab	100	62.207	ENSCJAG00000017609	GFI1	100	62.207	Callithrix_jacchus
ENSSLDG00000020163	gfi1ab	100	62.588	ENSCAFG00000020155	GFI1	100	62.588	Canis_familiaris
ENSSLDG00000020163	gfi1ab	100	62.588	ENSCAFG00020013371	GFI1	88	62.588	Canis_lupus_dingo
ENSSLDG00000020163	gfi1ab	100	62.648	ENSCHIG00000016135	GFI1	100	62.500	Capra_hircus
ENSSLDG00000020163	gfi1ab	100	61.374	ENSCPOG00000011727	GFI1	100	61.611	Cavia_porcellus
ENSSLDG00000020163	gfi1ab	100	61.792	ENSCCAG00000036072	GFI1	100	61.882	Cebus_capucinus
ENSSLDG00000020163	gfi1ab	100	61.882	ENSCATG00000037873	GFI1	100	62.441	Cercocebus_atys
ENSSLDG00000020163	gfi1ab	100	65.316	ENSCLAG00000005915	GFI1	100	59.310	Chinchilla_lanigera
ENSSLDG00000020163	gfi1ab	97	56.557	ENSCSAG00000001469	GFI1	99	57.221	Chlorocebus_sabaeus
ENSSLDG00000020163	gfi1ab	100	62.118	ENSCANG00000034077	GFI1	100	62.676	Colobus_angolensis_palliatus
ENSSLDG00000020163	gfi1ab	100	59.953	ENSCGRG00001015432	Gfi1	100	60.849	Cricetulus_griseus_chok1gshd
ENSSLDG00000020163	gfi1ab	100	61.055	ENSCSEG00000017729	GFI1	100	61.055	Cynoglossus_semilaevis
ENSSLDG00000020163	gfi1ab	100	59.148	ENSCVAG00000004930	GFI1	100	61.153	Cyprinodon_variegatus
ENSSLDG00000020163	gfi1ab	100	79.328	ENSCVAG00000011828	gfi1ab	100	79.070	Cyprinodon_variegatus
ENSSLDG00000020163	gfi1ab	100	70.707	ENSDARG00000044457	gfi1ab	100	70.707	Danio_rerio
ENSSLDG00000020163	gfi1ab	100	61.502	ENSDNOG00000000782	GFI1	97	61.972	Dasypus_novemcinctus
ENSSLDG00000020163	gfi1ab	100	63.420	ENSEASG00005015509	GFI1	86	63.420	Equus_asinus_asinus
ENSSLDG00000020163	gfi1ab	98	45.918	ENSECAG00000006647	GFI1	86	58.287	Equus_caballus
ENSSLDG00000020163	gfi1ab	100	61.814	ENSEEUG00000000198	GFI1	100	61.631	Erinaceus_europaeus
ENSSLDG00000020163	gfi1ab	100	61.042	ENSELUG00000019033	GFI1	100	61.042	Esox_lucius
ENSSLDG00000020163	gfi1ab	100	70.823	ENSELUG00000003015	gfi1ab	99	70.968	Esox_lucius
ENSSLDG00000020163	gfi1ab	100	62.353	ENSFCAG00000005914	GFI1	100	62.353	Felis_catus
ENSSLDG00000020163	gfi1ab	100	60.298	ENSFHEG00000000341	GFI1	100	61.787	Fundulus_heteroclitus
ENSSLDG00000020163	gfi1ab	100	79.692	ENSFHEG00000010997	gfi1ab	100	79.434	Fundulus_heteroclitus
ENSSLDG00000020163	gfi1ab	100	73.969	ENSGMOG00000007737	gfi1ab	100	73.969	Gadus_morhua
ENSSLDG00000020163	gfi1ab	100	63.081	ENSGALG00000043650	GFI1	100	63.081	Gallus_gallus
ENSSLDG00000020163	gfi1ab	100	80.818	ENSGAFG00000016637	gfi1ab	100	80.563	Gambusia_affinis
ENSSLDG00000020163	gfi1ab	100	58.824	ENSGAFG00000018063	GFI1	100	59.902	Gambusia_affinis
ENSSLDG00000020163	gfi1ab	100	84.635	ENSGACG00000004257	gfi1ab	97	84.635	Gasterosteus_aculeatus
ENSSLDG00000020163	gfi1ab	100	61.882	ENSGGOG00000005320	GFI1	100	62.441	Gorilla_gorilla
ENSSLDG00000020163	gfi1ab	100	86.053	ENSHBUG00000011969	gfi1ab	100	85.789	Haplochromis_burtoni
ENSSLDG00000020163	gfi1ab	100	63.033	ENSHGLG00000008020	GFI1	100	62.945	Heterocephalus_glaber_female
ENSSLDG00000020163	gfi1ab	100	63.033	ENSHGLG00100000610	GFI1	100	62.945	Heterocephalus_glaber_male
ENSSLDG00000020163	gfi1ab	100	59.744	ENSHCOG00000019555	GFI1	100	59.744	Hippocampus_comes
ENSSLDG00000020163	gfi1ab	100	63.457	ENSHCOG00000008590	gfi1ab	100	62.963	Hippocampus_comes
ENSSLDG00000020163	gfi1ab	99	65.455	ENSIPUG00000021407	-	52	75.207	Ictalurus_punctatus
ENSSLDG00000020163	gfi1ab	100	64.721	ENSIPUG00000010071	gfi1ab	87	64.646	Ictalurus_punctatus
ENSSLDG00000020163	gfi1ab	100	59.950	ENSIPUG00000013414	GFI1	100	60.697	Ictalurus_punctatus
ENSSLDG00000020163	gfi1ab	100	61.085	ENSSTOG00000014583	GFI1	100	61.321	Ictidomys_tridecemlineatus
ENSSLDG00000020163	gfi1ab	100	80.052	ENSKMAG00000003810	gfi1ab	100	79.793	Kryptolebias_marmoratus
ENSSLDG00000020163	gfi1ab	100	84.872	ENSLBEG00000027776	gfi1ab	100	84.615	Labrus_bergylta
ENSSLDG00000020163	gfi1ab	100	66.584	ENSLACG00000013362	GFI1	98	66.584	Latimeria_chalumnae
ENSSLDG00000020163	gfi1ab	99	45.144	ENSLACG00000017590	-	99	45.195	Latimeria_chalumnae
ENSSLDG00000020163	gfi1ab	100	68.342	ENSLOCG00000004711	gfi1ab	100	68.342	Lepisosteus_oculatus
ENSSLDG00000020163	gfi1ab	100	61.962	ENSLAFG00000018346	GFI1	100	61.962	Loxodonta_africana
ENSSLDG00000020163	gfi1ab	100	61.882	ENSMFAG00000045801	GFI1	100	62.441	Macaca_fascicularis
ENSSLDG00000020163	gfi1ab	100	61.882	ENSMNEG00000036338	GFI1	100	62.441	Macaca_nemestrina
ENSSLDG00000020163	gfi1ab	100	61.882	ENSMLEG00000036181	GFI1	100	62.441	Mandrillus_leucophaeus
ENSSLDG00000020163	gfi1ab	100	85.195	ENSMAMG00000008125	gfi1ab	100	84.935	Mastacembelus_armatus
ENSSLDG00000020163	gfi1ab	100	85.013	ENSMZEG00005009895	gfi1ab	100	84.755	Maylandia_zebra
ENSSLDG00000020163	gfi1ab	88	65.896	ENSMGAG00000008187	GFI1	99	65.896	Meleagris_gallopavo
ENSSLDG00000020163	gfi1ab	100	61.882	ENSMICG00000047208	GFI1	100	61.882	Microcebus_murinus
ENSSLDG00000020163	gfi1ab	100	73.980	ENSMMOG00000005556	gfi1ab	100	73.724	Mola_mola
ENSSLDG00000020163	gfi1ab	100	61.253	ENSMODG00000011802	GFI1	100	62.441	Monodelphis_domestica
ENSSLDG00000020163	gfi1ab	100	85.942	ENSMALG00000014672	gfi1ab	100	85.676	Monopterus_albus
ENSSLDG00000020163	gfi1ab	100	60.000	MGP_CAROLIEiJ_G0027508	Gfi1	100	96.296	Mus_caroli
ENSSLDG00000020163	gfi1ab	100	61.176	ENSMUSG00000029275	Gfi1	100	62.118	Mus_musculus
ENSSLDG00000020163	gfi1ab	100	60.235	MGP_PahariEiJ_G0017280	Gfi1	100	96.296	Mus_pahari
ENSSLDG00000020163	gfi1ab	100	60.235	MGP_SPRETEiJ_G0028507	Gfi1	100	61.647	Mus_spretus
ENSSLDG00000020163	gfi1ab	100	64.975	ENSMPUG00000004178	GFI1	97	64.975	Mustela_putorius_furo
ENSSLDG00000020163	gfi1ab	100	60.900	ENSMLUG00000015191	GFI1	97	60.664	Myotis_lucifugus
ENSSLDG00000020163	gfi1ab	100	83.673	ENSNBRG00000015774	gfi1ab	100	83.418	Neolamprologus_brichardi
ENSSLDG00000020163	gfi1ab	88	64.054	ENSNLEG00000010470	GFI1	91	64.595	Nomascus_leucogenys
ENSSLDG00000020163	gfi1ab	100	63.294	ENSOPRG00000001473	GFI1	100	63.294	Ochotona_princeps
ENSSLDG00000020163	gfi1ab	100	85.271	ENSONIG00000019246	gfi1ab	100	85.013	Oreochromis_niloticus
ENSSLDG00000020163	gfi1ab	98	56.486	ENSOCUG00000023553	GFI1	93	56.486	Oryctolagus_cuniculus
ENSSLDG00000020163	gfi1ab	100	62.755	ENSORLG00000005060	GFI1	100	62.755	Oryzias_latipes
ENSSLDG00000020163	gfi1ab	100	78.238	ENSORLG00000013806	gfi1ab	100	77.979	Oryzias_latipes
ENSSLDG00000020163	gfi1ab	100	77.461	ENSORLG00020001602	gfi1ab	100	77.202	Oryzias_latipes_hni
ENSSLDG00000020163	gfi1ab	100	56.848	ENSORLG00020002817	GFI1	100	56.848	Oryzias_latipes_hni
ENSSLDG00000020163	gfi1ab	100	62.183	ENSORLG00015006070	GFI1	100	62.183	Oryzias_latipes_hsok
ENSSLDG00000020163	gfi1ab	100	61.519	ENSOMEG00000016722	GFI1	100	62.025	Oryzias_melastigma
ENSSLDG00000020163	gfi1ab	100	64.508	ENSOGAG00000027913	GFI1	100	64.508	Otolemur_garnettii
ENSSLDG00000020163	gfi1ab	98	50.470	ENSOARG00000016329	GFI1	93	50.470	Ovis_aries
ENSSLDG00000020163	gfi1ab	100	65.285	ENSPPAG00000042186	GFI1	100	65.285	Pan_paniscus
ENSSLDG00000020163	gfi1ab	100	62.353	ENSPPRG00000007521	GFI1	100	62.353	Panthera_pardus
ENSSLDG00000020163	gfi1ab	100	61.882	ENSPTRG00000043053	GFI1	100	62.441	Pan_troglodytes
ENSSLDG00000020163	gfi1ab	100	61.882	ENSPANG00000016433	GFI1	100	62.441	Papio_anubis
ENSSLDG00000020163	gfi1ab	100	69.327	ENSPKIG00000004263	GFI1	100	69.327	Paramormyrops_kingsleyae
ENSSLDG00000020163	gfi1ab	87	66.667	ENSPSIG00000008734	GFI1	96	66.667	Pelodiscus_sinensis
ENSSLDG00000020163	gfi1ab	99	52.800	ENSPMGG00000011041	GFI1	68	85.165	Periophthalmus_magnuspinnatus
ENSSLDG00000020163	gfi1ab	100	77.922	ENSPMGG00000012546	gfi1ab	100	77.922	Periophthalmus_magnuspinnatus
ENSSLDG00000020163	gfi1ab	100	63.121	ENSPCIG00000013728	GFI1	100	63.121	Phascolarctos_cinereus
ENSSLDG00000020163	gfi1ab	100	81.074	ENSPFOG00000023214	gfi1ab	100	80.818	Poecilia_formosa
ENSSLDG00000020163	gfi1ab	100	59.606	ENSPLAG00000005376	GFI1	91	61.481	Poecilia_latipinna
ENSSLDG00000020163	gfi1ab	100	81.074	ENSPLAG00000010879	gfi1ab	100	80.818	Poecilia_latipinna
ENSSLDG00000020163	gfi1ab	100	60.100	ENSPMEG00000019299	GFI1	100	61.347	Poecilia_mexicana
ENSSLDG00000020163	gfi1ab	100	81.330	ENSPMEG00000013694	gfi1ab	100	81.074	Poecilia_mexicana
ENSSLDG00000020163	gfi1ab	100	57.068	ENSPREG00000007997	GFI1	100	55.959	Poecilia_reticulata
ENSSLDG00000020163	gfi1ab	100	81.748	ENSPREG00000014097	gfi1ab	100	81.491	Poecilia_reticulata
ENSSLDG00000020163	gfi1ab	100	50.812	ENSPCAG00000011020	GFI1	100	50.812	Procavia_capensis
ENSSLDG00000020163	gfi1ab	100	61.882	ENSPCOG00000020540	GFI1	100	61.882	Propithecus_coquereli
ENSSLDG00000020163	gfi1ab	100	61.905	ENSPVAG00000006928	GFI1	100	62.381	Pteropus_vampyrus
ENSSLDG00000020163	gfi1ab	100	85.271	ENSPNYG00000021183	gfi1ab	100	85.013	Pundamilia_nyererei
ENSSLDG00000020163	gfi1ab	100	57.214	ENSPNAG00000028014	GFI1	100	58.270	Pygocentrus_nattereri
ENSSLDG00000020163	gfi1ab	54	58.031	ENSPNAG00000014299	-	54	83.962	Pygocentrus_nattereri
ENSSLDG00000020163	gfi1ab	100	64.796	ENSPNAG00000027258	gfi1ab	100	64.541	Pygocentrus_nattereri
ENSSLDG00000020163	gfi1ab	100	60.235	ENSRNOG00000002042	Gfi1	100	60.284	Rattus_norvegicus
ENSSLDG00000020163	gfi1ab	100	61.882	ENSRBIG00000036467	GFI1	100	62.441	Rhinopithecus_bieti
ENSSLDG00000020163	gfi1ab	100	61.882	ENSRROG00000031687	GFI1	100	62.441	Rhinopithecus_roxellana
ENSSLDG00000020163	gfi1ab	100	62.353	ENSSBOG00000031300	GFI1	100	62.207	Saimiri_boliviensis_boliviensis
ENSSLDG00000020163	gfi1ab	100	72.237	ENSSFOG00015020295	gfi1	100	71.979	Scleropages_formosus
ENSSLDG00000020163	gfi1ab	100	83.290	ENSSMAG00000002782	gfi1ab	100	83.033	Scophthalmus_maximus
ENSSLDG00000020163	gfi1ab	100	41.379	ENSSMAG00000002798	-	98	41.379	Scophthalmus_maximus
ENSSLDG00000020163	gfi1ab	100	99.200	ENSSDUG00000022410	gfi1ab	100	99.200	Seriola_dumerili
ENSSLDG00000020163	gfi1ab	82	89.286	ENSSPAG00000009140	gfi1ab	100	89.286	Stegastes_partitus
ENSSLDG00000020163	gfi1ab	100	64.439	ENSSSCG00000006902	GFI1	100	64.916	Sus_scrofa
ENSSLDG00000020163	gfi1ab	88	65.318	ENSTGUG00000006060	GFI1	99	65.789	Taeniopygia_guttata
ENSSLDG00000020163	gfi1ab	100	78.351	ENSTRUG00000000415	gfi1ab	100	78.093	Takifugu_rubripes
ENSSLDG00000020163	gfi1ab	100	73.008	ENSTNIG00000000651	gfi1ab	97	72.868	Tetraodon_nigroviridis
ENSSLDG00000020163	gfi1ab	100	62.708	ENSTTRG00000000082	GFI1	100	63.420	Tursiops_truncatus
ENSSLDG00000020163	gfi1ab	100	62.954	ENSUAMG00000021124	GFI1	91	63.570	Ursus_americanus
ENSSLDG00000020163	gfi1ab	100	64.796	ENSXETG00000023006	gfi1	98	64.796	Xenopus_tropicalis
ENSSLDG00000020163	gfi1ab	100	81.491	ENSXMAG00000010523	gfi1ab	100	81.234	Xiphophorus_maculatus
ENSSLDG00000020163	gfi1ab	87	51.117	ENSXMAG00000009274	GFI1	72	52.646	Xiphophorus_maculatus