EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000020200 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 13050 bases
Position: chrPEQF01098949.1:646522-659571
Accession: 111659009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000025997	SpoU_methylase	PF00588.19	7.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000026794	-	5493	XM_023411812	ENSSLDP00000025997	1617 (aa)	XP_023267580	UPI000C6FBF1D

Gene Model

Click here to download ENSSLDG00000020200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020200	si:dkey-85a20.4	86	46.499	ENSG00000059588	TARBP1	99	43.276	Homo_sapiens
ENSSLDG00000020200	si:dkey-85a20.4	100	81.885	ENSAPOG00000016419	si:dkey-85a20.4	99	81.885	Acanthochromis_polyacanthus
ENSSLDG00000020200	si:dkey-85a20.4	84	45.704	ENSAMEG00000003359	TARBP1	99	45.435	Ailuropoda_melanoleuca
ENSSLDG00000020200	si:dkey-85a20.4	100	82.593	ENSATEG00000020266	si:dkey-85a20.4	99	82.593	Anabas_testudineus
ENSSLDG00000020200	si:dkey-85a20.4	83	46.148	ENSAPLG00000007666	TARBP1	99	46.842	Anas_platyrhynchos
ENSSLDG00000020200	si:dkey-85a20.4	84	43.222	ENSACAG00000001142	TARBP1	86	42.654	Anolis_carolinensis
ENSSLDG00000020200	si:dkey-85a20.4	86	45.258	ENSANAG00000022031	TARBP1	88	45.150	Aotus_nancymaae
ENSSLDG00000020200	si:dkey-85a20.4	85	55.577	ENSBTAG00000004517	TARBP1	90	55.577	Bos_taurus
ENSSLDG00000020200	si:dkey-85a20.4	99	42.857	ENSCJAG00000018155	TARBP1	99	43.011	Callithrix_jacchus
ENSSLDG00000020200	si:dkey-85a20.4	86	45.816	ENSCAFG00000011533	TARBP1	98	45.948	Canis_familiaris
ENSSLDG00000020200	si:dkey-85a20.4	86	45.887	ENSCAFG00020027141	TARBP1	99	42.626	Canis_lupus_dingo
ENSSLDG00000020200	si:dkey-85a20.4	89	45.007	ENSCHIG00000011437	TARBP1	91	44.378	Capra_hircus
ENSSLDG00000020200	si:dkey-85a20.4	83	46.041	ENSTSYG00000010382	TARBP1	99	45.827	Carlito_syrichta
ENSSLDG00000020200	si:dkey-85a20.4	78	43.823	ENSCAPG00000010831	TARBP1	99	43.512	Cavia_aperea
ENSSLDG00000020200	si:dkey-85a20.4	84	45.878	ENSCPOG00000013995	TARBP1	86	44.811	Cavia_porcellus
ENSSLDG00000020200	si:dkey-85a20.4	82	56.126	ENSCCAG00000037278	TARBP1	99	56.126	Cebus_capucinus
ENSSLDG00000020200	si:dkey-85a20.4	86	46.396	ENSCATG00000011754	TARBP1	99	43.250	Cercocebus_atys
ENSSLDG00000020200	si:dkey-85a20.4	81	45.311	ENSCLAG00000003655	TARBP1	96	45.386	Chinchilla_lanigera
ENSSLDG00000020200	si:dkey-85a20.4	79	47.193	ENSCSAG00000010100	TARBP1	99	47.117	Chlorocebus_sabaeus
ENSSLDG00000020200	si:dkey-85a20.4	74	51.935	ENSCPBG00000005587	TARBP1	96	42.810	Chrysemys_picta_bellii
ENSSLDG00000020200	si:dkey-85a20.4	83	46.906	ENSCANG00000034343	TARBP1	99	46.835	Colobus_angolensis_palliatus
ENSSLDG00000020200	si:dkey-85a20.4	86	45.186	ENSCGRG00001016690	Tarbp1	87	45.046	Cricetulus_griseus_chok1gshd
ENSSLDG00000020200	si:dkey-85a20.4	86	45.257	ENSCGRG00000016893	Tarbp1	94	45.046	Cricetulus_griseus_crigri
ENSSLDG00000020200	si:dkey-85a20.4	96	74.015	ENSCSEG00000005255	si:dkey-85a20.4	99	70.481	Cynoglossus_semilaevis
ENSSLDG00000020200	si:dkey-85a20.4	99	56.898	ENSDARG00000079055	si:dkey-85a20.4	99	72.539	Danio_rerio
ENSSLDG00000020200	si:dkey-85a20.4	92	44.502	ENSDNOG00000008637	TARBP1	99	43.026	Dasypus_novemcinctus
ENSSLDG00000020200	si:dkey-85a20.4	80	46.582	ENSDORG00000007984	Tarbp1	100	46.431	Dipodomys_ordii
ENSSLDG00000020200	si:dkey-85a20.4	86	46.371	ENSEASG00005000252	TARBP1	91	44.967	Equus_asinus_asinus
ENSSLDG00000020200	si:dkey-85a20.4	86	46.535	ENSECAG00000023673	TARBP1	85	46.605	Equus_caballus
ENSSLDG00000020200	si:dkey-85a20.4	99	62.843	ENSELUG00000012193	si:dkey-85a20.4	99	62.782	Esox_lucius
ENSSLDG00000020200	si:dkey-85a20.4	86	44.155	ENSFCAG00000014183	TARBP1	91	42.670	Felis_catus
ENSSLDG00000020200	si:dkey-85a20.4	80	46.929	ENSFALG00000013565	TARBP1	99	46.692	Ficedula_albicollis
ENSSLDG00000020200	si:dkey-85a20.4	79	44.520	ENSFDAG00000001308	TARBP1	99	44.670	Fukomys_damarensis
ENSSLDG00000020200	si:dkey-85a20.4	100	63.592	ENSFHEG00000007565	si:dkey-85a20.4	97	79.224	Fundulus_heteroclitus
ENSSLDG00000020200	si:dkey-85a20.4	86	66.880	ENSGMOG00000004549	si:dkey-85a20.4	99	66.951	Gadus_morhua
ENSSLDG00000020200	si:dkey-85a20.4	84	44.840	ENSGALG00000011000	TARBP1	99	41.941	Gallus_gallus
ENSSLDG00000020200	si:dkey-85a20.4	99	73.567	ENSGAFG00000007387	si:dkey-85a20.4	99	73.383	Gambusia_affinis
ENSSLDG00000020200	si:dkey-85a20.4	86	78.884	ENSGACG00000005865	si:dkey-85a20.4	99	78.814	Gasterosteus_aculeatus
ENSSLDG00000020200	si:dkey-85a20.4	84	47.592	ENSGAGG00000012102	TARBP1	89	46.947	Gopherus_agassizii
ENSSLDG00000020200	si:dkey-85a20.4	84	45.474	ENSGGOG00000022879	TARBP1	99	45.513	Gorilla_gorilla
ENSSLDG00000020200	si:dkey-85a20.4	100	80.482	ENSHBUG00000008877	si:dkey-85a20.4	99	80.482	Haplochromis_burtoni
ENSSLDG00000020200	si:dkey-85a20.4	84	46.370	ENSHGLG00000011592	TARBP1	85	46.187	Heterocephalus_glaber_female
ENSSLDG00000020200	si:dkey-85a20.4	84	46.614	ENSHGLG00100015169	TARBP1	94	46.431	Heterocephalus_glaber_male
ENSSLDG00000020200	si:dkey-85a20.4	96	59.843	ENSIPUG00000005249	si:dkey-85a20.4	98	55.453	Ictalurus_punctatus
ENSSLDG00000020200	si:dkey-85a20.4	85	45.468	ENSSTOG00000032291	TARBP1	98	45.682	Ictidomys_tridecemlineatus
ENSSLDG00000020200	si:dkey-85a20.4	84	43.141	ENSJJAG00000017840	Tarbp1	94	42.908	Jaculus_jaculus
ENSSLDG00000020200	si:dkey-85a20.4	88	71.429	ENSKMAG00000017546	si:dkey-85a20.4	97	71.429	Kryptolebias_marmoratus
ENSSLDG00000020200	si:dkey-85a20.4	83	80.293	ENSLBEG00000012132	si:dkey-85a20.4	96	80.293	Labrus_bergylta
ENSSLDG00000020200	si:dkey-85a20.4	99	43.028	ENSLACG00000004337	TARBP1	99	43.114	Latimeria_chalumnae
ENSSLDG00000020200	si:dkey-85a20.4	99	54.279	ENSLOCG00000016214	si:dkey-85a20.4	100	54.212	Lepisosteus_oculatus
ENSSLDG00000020200	si:dkey-85a20.4	86	46.100	ENSLAFG00000011394	TARBP1	95	44.357	Loxodonta_africana
ENSSLDG00000020200	si:dkey-85a20.4	86	44.989	ENSMFAG00000041068	TARBP1	99	42.115	Macaca_fascicularis
ENSSLDG00000020200	si:dkey-85a20.4	86	44.857	ENSMMUG00000021703	TARBP1	86	44.787	Macaca_mulatta
ENSSLDG00000020200	si:dkey-85a20.4	86	46.461	ENSMNEG00000045002	TARBP1	99	43.182	Macaca_nemestrina
ENSSLDG00000020200	si:dkey-85a20.4	83	46.647	ENSMLEG00000044182	TARBP1	99	46.575	Mandrillus_leucophaeus
ENSSLDG00000020200	si:dkey-85a20.4	99	79.162	ENSMAMG00000021760	si:dkey-85a20.4	99	79.162	Mastacembelus_armatus
ENSSLDG00000020200	si:dkey-85a20.4	100	80.605	ENSMZEG00005005751	si:dkey-85a20.4	99	80.605	Maylandia_zebra
ENSSLDG00000020200	si:dkey-85a20.4	86	45.678	ENSMAUG00000020968	Tarbp1	87	45.257	Mesocricetus_auratus
ENSSLDG00000020200	si:dkey-85a20.4	88	41.064	ENSMICG00000015280	TARBP1	99	38.862	Microcebus_murinus
ENSSLDG00000020200	si:dkey-85a20.4	86	44.696	ENSMOCG00000004128	Tarbp1	87	44.382	Microtus_ochrogaster
ENSSLDG00000020200	si:dkey-85a20.4	99	76.205	ENSMMOG00000007795	si:dkey-85a20.4	99	76.205	Mola_mola
ENSSLDG00000020200	si:dkey-85a20.4	86	45.474	ENSMODG00000008504	TARBP1	99	42.239	Monodelphis_domestica
ENSSLDG00000020200	si:dkey-85a20.4	99	79.578	ENSMALG00000002916	si:dkey-85a20.4	99	79.143	Monopterus_albus
ENSSLDG00000020200	si:dkey-85a20.4	86	45.070	MGP_CAROLIEiJ_G0031729	Tarbp1	78	60.837	Mus_caroli
ENSSLDG00000020200	si:dkey-85a20.4	86	45.205	ENSMUSG00000090290	Tarbp1	87	45.205	Mus_musculus
ENSSLDG00000020200	si:dkey-85a20.4	86	45.250	MGP_PahariEiJ_G0023326	Tarbp1	87	45.314	Mus_pahari
ENSSLDG00000020200	si:dkey-85a20.4	86	45.346	MGP_SPRETEiJ_G0032846	Tarbp1	87	45.346	Mus_spretus
ENSSLDG00000020200	si:dkey-85a20.4	76	46.630	ENSMPUG00000002802	TARBP1	99	46.582	Mustela_putorius_furo
ENSSLDG00000020200	si:dkey-85a20.4	84	45.025	ENSMLUG00000002414	TARBP1	99	44.986	Myotis_lucifugus
ENSSLDG00000020200	si:dkey-85a20.4	86	46.499	ENSNLEG00000002518	TARBP1	99	43.216	Nomascus_leucogenys
ENSSLDG00000020200	si:dkey-85a20.4	65	55.889	ENSMEUG00000011370	-	65	55.889	Notamacropus_eugenii
ENSSLDG00000020200	si:dkey-85a20.4	69	54.013	ENSOPRG00000013822	TARBP1	69	54.013	Ochotona_princeps
ENSSLDG00000020200	si:dkey-85a20.4	85	45.248	ENSODEG00000005238	TARBP1	89	45.067	Octodon_degus
ENSSLDG00000020200	si:dkey-85a20.4	86	81.643	ENSONIG00000009789	si:dkey-85a20.4	99	81.643	Oreochromis_niloticus
ENSSLDG00000020200	si:dkey-85a20.4	86	45.801	ENSOCUG00000017418	TARBP1	99	42.540	Oryctolagus_cuniculus
ENSSLDG00000020200	si:dkey-85a20.4	100	69.525	ENSORLG00000010529	si:dkey-85a20.4	99	69.587	Oryzias_latipes
ENSSLDG00000020200	si:dkey-85a20.4	100	69.525	ENSORLG00020019264	si:dkey-85a20.4	99	69.587	Oryzias_latipes_hni
ENSSLDG00000020200	si:dkey-85a20.4	100	69.217	ENSORLG00015003276	si:dkey-85a20.4	99	69.278	Oryzias_latipes_hsok
ENSSLDG00000020200	si:dkey-85a20.4	88	43.801	ENSOGAG00000002379	TARBP1	91	42.717	Otolemur_garnettii
ENSSLDG00000020200	si:dkey-85a20.4	86	45.822	ENSOARG00000003434	TARBP1	95	44.877	Ovis_aries
ENSSLDG00000020200	si:dkey-85a20.4	84	46.877	ENSPPAG00000028097	TARBP1	99	46.915	Pan_paniscus
ENSSLDG00000020200	si:dkey-85a20.4	84	44.942	ENSPPRG00000013561	TARBP1	88	44.629	Panthera_pardus
ENSSLDG00000020200	si:dkey-85a20.4	82	45.873	ENSPTIG00000009281	TARBP1	99	45.727	Panthera_tigris_altaica
ENSSLDG00000020200	si:dkey-85a20.4	86	46.569	ENSPTRG00000002124	TARBP1	99	43.284	Pan_troglodytes
ENSSLDG00000020200	si:dkey-85a20.4	86	46.396	ENSPANG00000021933	TARBP1	91	44.735	Papio_anubis
ENSSLDG00000020200	si:dkey-85a20.4	99	58.799	ENSPKIG00000016716	si:dkey-85a20.4	99	58.799	Paramormyrops_kingsleyae
ENSSLDG00000020200	si:dkey-85a20.4	79	46.492	ENSPSIG00000010699	TARBP1	99	46.338	Pelodiscus_sinensis
ENSSLDG00000020200	si:dkey-85a20.4	86	44.940	ENSPEMG00000006888	Tarbp1	92	44.624	Peromyscus_maniculatus_bairdii
ENSSLDG00000020200	si:dkey-85a20.4	77	68.878	ENSPCIG00000029710	TARBP1	83	68.878	Phascolarctos_cinereus
ENSSLDG00000020200	si:dkey-85a20.4	86	74.357	ENSPFOG00000013020	si:dkey-85a20.4	99	74.214	Poecilia_formosa
ENSSLDG00000020200	si:dkey-85a20.4	100	73.202	ENSPLAG00000006044	si:dkey-85a20.4	99	73.079	Poecilia_latipinna
ENSSLDG00000020200	si:dkey-85a20.4	100	73.387	ENSPMEG00000017857	si:dkey-85a20.4	99	73.264	Poecilia_mexicana
ENSSLDG00000020200	si:dkey-85a20.4	99	73.063	ENSPREG00000022753	si:dkey-85a20.4	99	72.940	Poecilia_reticulata
ENSSLDG00000020200	si:dkey-85a20.4	77	46.215	ENSPPYG00000000102	TARBP1	99	46.262	Pongo_abelii
ENSSLDG00000020200	si:dkey-85a20.4	70	77.551	ENSPCAG00000004808	TARBP1	84	77.551	Procavia_capensis
ENSSLDG00000020200	si:dkey-85a20.4	86	44.601	ENSPCOG00000005666	TARBP1	99	41.437	Propithecus_coquereli
ENSSLDG00000020200	si:dkey-85a20.4	84	39.813	ENSPVAG00000014798	TARBP1	85	39.813	Pteropus_vampyrus
ENSSLDG00000020200	si:dkey-85a20.4	99	76.514	ENSPNYG00000019135	si:dkey-85a20.4	99	76.514	Pundamilia_nyererei
ENSSLDG00000020200	si:dkey-85a20.4	92	42.109	ENSRNOG00000053574	Tarbp1	93	41.950	Rattus_norvegicus
ENSSLDG00000020200	si:dkey-85a20.4	86	43.627	ENSRBIG00000043362	TARBP1	94	43.557	Rhinopithecus_bieti
ENSSLDG00000020200	si:dkey-85a20.4	86	46.396	ENSRROG00000029527	TARBP1	89	46.396	Rhinopithecus_roxellana
ENSSLDG00000020200	si:dkey-85a20.4	83	46.387	ENSSBOG00000034503	TARBP1	96	46.426	Saimiri_boliviensis_boliviensis
ENSSLDG00000020200	si:dkey-85a20.4	83	45.773	ENSSHAG00000000013	TARBP1	99	45.700	Sarcophilus_harrisii
ENSSLDG00000020200	si:dkey-85a20.4	100	54.862	ENSSFOG00015002660	si:dkey-85a20.4	97	62.150	Scleropages_formosus
ENSSLDG00000020200	si:dkey-85a20.4	100	80.729	ENSSMAG00000007081	si:dkey-85a20.4	99	81.155	Scophthalmus_maximus
ENSSLDG00000020200	si:dkey-85a20.4	100	91.280	ENSSDUG00000023566	si:dkey-85a20.4	99	91.280	Seriola_dumerili
ENSSLDG00000020200	si:dkey-85a20.4	75	58.508	ENSSARG00000012207	TARBP1	76	58.508	Sorex_araneus
ENSSLDG00000020200	si:dkey-85a20.4	86	44.835	ENSSPUG00000015364	TARBP1	99	42.054	Sphenodon_punctatus
ENSSLDG00000020200	si:dkey-85a20.4	100	83.179	ENSSPAG00000007213	si:dkey-85a20.4	99	83.179	Stegastes_partitus
ENSSLDG00000020200	si:dkey-85a20.4	86	46.921	ENSSSCG00000010160	TARBP1	91	46.850	Sus_scrofa
ENSSLDG00000020200	si:dkey-85a20.4	80	46.032	ENSTGUG00000010214	TARBP1	99	46.148	Taeniopygia_guttata
ENSSLDG00000020200	si:dkey-85a20.4	94	67.714	ENSTNIG00000016586	si:dkey-85a20.4	99	73.958	Tetraodon_nigroviridis
ENSSLDG00000020200	si:dkey-85a20.4	79	42.057	ENSTTRG00000008707	TARBP1	85	41.623	Tursiops_truncatus
ENSSLDG00000020200	si:dkey-85a20.4	82	45.535	ENSUMAG00000006730	TARBP1	99	45.528	Ursus_maritimus
ENSSLDG00000020200	si:dkey-85a20.4	64	76.344	ENSVPAG00000007665	TARBP1	73	76.344	Vicugna_pacos
ENSSLDG00000020200	si:dkey-85a20.4	84	46.398	ENSVVUG00000007460	TARBP1	98	47.407	Vulpes_vulpes
ENSSLDG00000020200	si:dkey-85a20.4	83	42.929	ENSXETG00000016224	tarbp1	99	43.218	Xenopus_tropicalis
ENSSLDG00000020200	si:dkey-85a20.4	83	75.923	ENSXCOG00000011779	si:dkey-85a20.4	99	76.060	Xiphophorus_couchianus
ENSSLDG00000020200	si:dkey-85a20.4	65	73.930	ENSXMAG00000009600	si:dkey-85a20.4	100	73.739	Xiphophorus_maculatus