EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000020276 (Gene tree)
Gene ID
-
Gene Symbol
RBMS3
Alias
-
Full Name
RNA binding motif single stranded interacting protein 3
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
111902 bases
Position
chrPEQF01098815.1:417819-529720
Accession
111655937
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000026112RRM_1PF00076.224.9e-3212
ENSSLDP00000026112RRM_1PF00076.224.9e-3222
ENSSLDP00000026153RRM_1PF00076.225e-3212
ENSSLDP00000026153RRM_1PF00076.225e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000026953RBMS3-2021287-ENSSLDP00000026153428 (aa)--
ENSSLDT00000026911RBMS3-2014082XM_023407504ENSSLDP00000026112429 (aa)XP_023263272UPI000C6F8657
Gene Model
Click here to download ENSSLDG00000020276's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020276's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000020276RBMS38670.652ENSSLDG00000003394rbms2a9172.755
ENSSLDG00000020276RBMS38670.190ENSSLDG00000004447rbms2b9072.171
ENSSLDG00000020276RBMS35035.000ENSSLDG00000015995-6935.000
ENSSLDG00000020276RBMS36333.750ENSSLDG00000013940celf3a7833.750
ENSSLDG00000020276RBMS38667.742ENSSLDG00000016556RBMS19069.697
ENSSLDG00000020276RBMS37833.750ENSSLDG00000015302celf3b7433.750
ENSSLDG00000020276RBMS39982.944ENSSLDG00000013224-9982.710
ENSSLDG00000020276RBMS35034.737ENSSLDG00000006981pabpc1l6734.737
ENSSLDG00000020276RBMS37362.579ENSSLDG00000009495rbms1a8262.579
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000020276RBMS310080.278ENSG00000144642RBMS310084.133Homo_sapiens
ENSSLDG00000020276RBMS39982.944ENSAPOG00000003432-9982.710Acanthochromis_polyacanthus
ENSSLDG00000020276RBMS310090.043ENSAPOG00000007266rbms310090.043Acanthochromis_polyacanthus
ENSSLDG00000020276RBMS36776.221ENSAMEG00000005947RBMS310076.066Ailuropoda_melanoleuca
ENSSLDG00000020276RBMS38686.141ENSACIG00000021113RBMS39686.721Amphilophus_citrinellus
ENSSLDG00000020276RBMS37088.079ENSACIG00000006987-8088.851Amphilophus_citrinellus
ENSSLDG00000020276RBMS39976.734ENSAOCG00000024104-9976.286Amphiprion_ocellaris
ENSSLDG00000020276RBMS310097.902ENSAOCG00000021274rbms310097.902Amphiprion_ocellaris
ENSSLDG00000020276RBMS39976.347ENSAPEG00000009481-9976.347Amphiprion_percula
ENSSLDG00000020276RBMS38298.017ENSAPEG00000016299rbms39398.017Amphiprion_percula
ENSSLDG00000020276RBMS310097.436ENSATEG00000024295rbms310097.436Anabas_testudineus
ENSSLDG00000020276RBMS39982.944ENSATEG00000008433-9982.710Anabas_testudineus
ENSSLDG00000020276RBMS39978.555ENSAPLG00000012270RBMS310078.458Anas_platyrhynchos
ENSSLDG00000020276RBMS310080.742ENSACAG00000028664RBMS39980.510Anolis_carolinensis
ENSSLDG00000020276RBMS310077.928ENSANAG00000021899RBMS310077.703Aotus_nancymaae
ENSSLDG00000020276RBMS310096.270ENSACLG00000018506rbms310096.270Astatotilapia_calliptera
ENSSLDG00000020276RBMS39975.831ENSACLG00000008976-9475.388Astatotilapia_calliptera
ENSSLDG00000020276RBMS310081.439ENSAMXG00000020388rbms310083.759Astyanax_mexicanus
ENSSLDG00000020276RBMS36379.630ENSAMXG00000043770-10079.630Astyanax_mexicanus
ENSSLDG00000020276RBMS310080.742ENSBTAG00000044062RBMS310080.510Bos_taurus
ENSSLDG00000020276RBMS310077.928ENSCJAG00000004312RBMS310077.703Callithrix_jacchus
ENSSLDG00000020276RBMS310077.405ENSCAFG00000005464RBMS39977.303Canis_familiaris
ENSSLDG00000020276RBMS310077.405ENSCAFG00020024980RBMS310077.303Canis_lupus_dingo
ENSSLDG00000020276RBMS310080.278ENSCHIG00000009144RBMS39980.046Capra_hircus
ENSSLDG00000020276RBMS37478.743ENSTSYG00000002615RBMS310078.443Carlito_syrichta
ENSSLDG00000020276RBMS38579.564ENSCAPG00000017783RBMS39379.292Cavia_aperea
ENSSLDG00000020276RBMS310080.742ENSCPOG00000006457RBMS39980.510Cavia_porcellus
ENSSLDG00000020276RBMS310077.928ENSCCAG00000008671RBMS310077.703Cebus_capucinus
ENSSLDG00000020276RBMS310077.703ENSCATG00000013222RBMS310077.477Cercocebus_atys
ENSSLDG00000020276RBMS310080.510ENSCLAG00000005866RBMS39980.278Chinchilla_lanigera
ENSSLDG00000020276RBMS36379.197ENSCSAG00000009655RBMS39978.832Chlorocebus_sabaeus
ENSSLDG00000020276RBMS38584.000ENSCHOG00000000758RBMS38179.155Choloepus_hoffmanni
ENSSLDG00000020276RBMS310081.206ENSCPBG00000022678RBMS39882.474Chrysemys_picta_bellii
ENSSLDG00000020276RBMS310077.928ENSCANG00000032137RBMS310077.703Colobus_angolensis_palliatus
ENSSLDG00000020276RBMS310077.262ENSCGRG00001007243Rbms39978.190Cricetulus_griseus_chok1gshd
ENSSLDG00000020276RBMS310077.262ENSCGRG00000004599Rbms39978.190Cricetulus_griseus_crigri
ENSSLDG00000020276RBMS310082.367ENSCSEG00000014677-9485.882Cynoglossus_semilaevis
ENSSLDG00000020276RBMS310095.105ENSCSEG00000010011RBMS310095.105Cynoglossus_semilaevis
ENSSLDG00000020276RBMS310095.105ENSCVAG00000022354rbms310095.105Cyprinodon_variegatus
ENSSLDG00000020276RBMS39979.673ENSCVAG00000022814-9981.542Cyprinodon_variegatus
ENSSLDG00000020276RBMS310084.884ENSDARG00000044574rbms38998.438Danio_rerio
ENSSLDG00000020276RBMS310079.582ENSDNOG00000016645RBMS39779.350Dasypus_novemcinctus
ENSSLDG00000020276RBMS310079.814ENSDORG00000007220Rbms39979.582Dipodomys_ordii
ENSSLDG00000020276RBMS37965.254ENSETEG00000009485-8165.254Echinops_telfairi
ENSSLDG00000020276RBMS36056.154ENSEBUG00000005830rbms38356.154Eptatretus_burgeri
ENSSLDG00000020276RBMS310080.046ENSEASG00005006152RBMS39979.814Equus_asinus_asinus
ENSSLDG00000020276RBMS310080.046ENSECAG00000017871RBMS39979.814Equus_caballus
ENSSLDG00000020276RBMS39071.782ENSEEUG00000014337RBMS310071.642Erinaceus_europaeus
ENSSLDG00000020276RBMS39084.278ENSELUG00000006905-9885.490Esox_lucius
ENSSLDG00000020276RBMS310079.767ENSELUG00000002862rbms310081.628Esox_lucius
ENSSLDG00000020276RBMS310079.814ENSFCAG00000002130RBMS39979.582Felis_catus
ENSSLDG00000020276RBMS310081.206ENSFALG00000009165RBMS39980.974Ficedula_albicollis
ENSSLDG00000020276RBMS310080.046ENSFDAG00000008278RBMS39979.814Fukomys_damarensis
ENSSLDG00000020276RBMS39976.995ENSFHEG00000004787RBMS39585.908Fundulus_heteroclitus
ENSSLDG00000020276RBMS38679.241ENSGMOG00000002600-9379.177Gadus_morhua
ENSSLDG00000020276RBMS310081.206ENSGALG00000011439RBMS39980.974Gallus_gallus
ENSSLDG00000020276RBMS310095.105ENSGAFG00000000168rbms310095.105Gambusia_affinis
ENSSLDG00000020276RBMS39982.477ENSGAFG00000003329-9982.009Gambusia_affinis
ENSSLDG00000020276RBMS36480.000ENSGAGG00000004039RBMS310079.636Gopherus_agassizii
ENSSLDG00000020276RBMS310077.928ENSGGOG00000007228RBMS310077.703Gorilla_gorilla
ENSSLDG00000020276RBMS310079.241ENSHBUG00000019785-9678.795Haplochromis_burtoni
ENSSLDG00000020276RBMS36495.255ENSHBUG00000021196rbms39495.255Haplochromis_burtoni
ENSSLDG00000020276RBMS310080.046ENSHGLG00000002170RBMS39979.814Heterocephalus_glaber_female
ENSSLDG00000020276RBMS310080.046ENSHGLG00100014278RBMS39979.814Heterocephalus_glaber_male
ENSSLDG00000020276RBMS39981.352ENSHCOG00000007894-9980.886Hippocampus_comes
ENSSLDG00000020276RBMS310081.903ENSIPUG00000017680rbms310084.223Ictalurus_punctatus
ENSSLDG00000020276RBMS310080.510ENSSTOG00000006324RBMS39980.278Ictidomys_tridecemlineatus
ENSSLDG00000020276RBMS310077.262ENSJJAG00000014708Rbms39977.030Jaculus_jaculus
ENSSLDG00000020276RBMS310096.512ENSKMAG00000020500rbms310096.512Kryptolebias_marmoratus
ENSSLDG00000020276RBMS39982.710ENSKMAG00000012586-9982.477Kryptolebias_marmoratus
ENSSLDG00000020276RBMS39981.967ENSLBEG00000027388-9982.201Labrus_bergylta
ENSSLDG00000020276RBMS35987.452ENSLBEG00000006677rbms39787.452Labrus_bergylta
ENSSLDG00000020276RBMS310082.831ENSLACG00000010581RBMS310082.599Latimeria_chalumnae
ENSSLDG00000020276RBMS36884.354ENSLOCG00000002328rbms310084.014Lepisosteus_oculatus
ENSSLDG00000020276RBMS310077.405ENSLAFG00000000354RBMS310077.303Loxodonta_africana
ENSSLDG00000020276RBMS310080.278ENSMFAG00000033300RBMS39980.046Macaca_fascicularis
ENSSLDG00000020276RBMS310080.278ENSMMUG00000004404RBMS39980.046Macaca_mulatta
ENSSLDG00000020276RBMS310077.928ENSMNEG00000035839RBMS310077.703Macaca_nemestrina
ENSSLDG00000020276RBMS310077.703ENSMLEG00000029464RBMS310077.477Mandrillus_leucophaeus
ENSSLDG00000020276RBMS310097.436ENSMAMG00000024043rbms310097.436Mastacembelus_armatus
ENSSLDG00000020276RBMS39085.309ENSMAMG00000002176-8385.052Mastacembelus_armatus
ENSSLDG00000020276RBMS310096.270ENSMZEG00005006308rbms310096.270Maylandia_zebra
ENSSLDG00000020276RBMS310079.864ENSMZEG00005026469-9679.864Maylandia_zebra
ENSSLDG00000020276RBMS310077.262ENSMAUG00000016436Rbms39978.190Mesocricetus_auratus
ENSSLDG00000020276RBMS310077.928ENSMICG00000049249RBMS310077.703Microcebus_murinus
ENSSLDG00000020276RBMS310076.798ENSMOCG00000006997Rbms39977.726Microtus_ochrogaster
ENSSLDG00000020276RBMS39981.967ENSMMOG00000015071-9981.967Mola_mola
ENSSLDG00000020276RBMS38298.017ENSMMOG00000008471RBMS39598.017Mola_mola
ENSSLDG00000020276RBMS310073.510ENSMODG00000015125RBMS38778.772Monodelphis_domestica
ENSSLDG00000020276RBMS39983.411ENSMALG00000009155-9983.178Monopterus_albus
ENSSLDG00000020276RBMS310097.436ENSMALG00000019536RBMS310097.436Monopterus_albus
ENSSLDG00000020276RBMS310076.798MGP_CAROLIEiJ_G0032783Rbms39977.726Mus_caroli
ENSSLDG00000020276RBMS310077.262ENSMUSG00000039607Rbms39978.190Mus_musculus
ENSSLDG00000020276RBMS310077.083MGP_PahariEiJ_G0015650Rbms39978.009Mus_pahari
ENSSLDG00000020276RBMS310077.262MGP_SPRETEiJ_G0033930Rbms39978.190Mus_spretus
ENSSLDG00000020276RBMS310077.405ENSMPUG00000011956RBMS310077.303Mustela_putorius_furo
ENSSLDG00000020276RBMS310080.278ENSMLUG00000000659RBMS310080.046Myotis_lucifugus
ENSSLDG00000020276RBMS310079.582ENSNGAG00000014039Rbms39979.350Nannospalax_galili
ENSSLDG00000020276RBMS39982.710ENSNBRG00000018065-9982.477Neolamprologus_brichardi
ENSSLDG00000020276RBMS310077.928ENSNLEG00000004129RBMS310077.703Nomascus_leucogenys
ENSSLDG00000020276RBMS39971.300ENSMEUG00000004772RBMS310072.072Notamacropus_eugenii
ENSSLDG00000020276RBMS39977.578ENSOPRG00000006808RBMS38577.477Ochotona_princeps
ENSSLDG00000020276RBMS310080.046ENSODEG00000003651RBMS39979.814Octodon_degus
ENSSLDG00000020276RBMS310090.210ENSONIG00000007172rbms310090.210Oreochromis_niloticus
ENSSLDG00000020276RBMS310079.326ENSOANG00000010529RBMS39978.652Ornithorhynchus_anatinus
ENSSLDG00000020276RBMS310076.957ENSOCUG00000004840RBMS39976.854Oryctolagus_cuniculus
ENSSLDG00000020276RBMS39982.944ENSORLG00000002306-9982.710Oryzias_latipes
ENSSLDG00000020276RBMS310092.541ENSORLG00000005370RBMS310092.308Oryzias_latipes
ENSSLDG00000020276RBMS39982.944ENSORLG00020008496-9982.710Oryzias_latipes_hni
ENSSLDG00000020276RBMS310092.308ENSORLG00020022674RBMS310092.075Oryzias_latipes_hni
ENSSLDG00000020276RBMS310090.443ENSORLG00015005509rbms310092.308Oryzias_latipes_hsok
ENSSLDG00000020276RBMS39982.944ENSORLG00015015719-9982.710Oryzias_latipes_hsok
ENSSLDG00000020276RBMS39181.980ENSOMEG00000007677-9585.519Oryzias_melastigma
ENSSLDG00000020276RBMS310093.240ENSOMEG00000014805RBMS310092.774Oryzias_melastigma
ENSSLDG00000020276RBMS310076.957ENSOARG00000014684RBMS39976.854Ovis_aries
ENSSLDG00000020276RBMS310077.928ENSPPAG00000036519RBMS310077.703Pan_paniscus
ENSSLDG00000020276RBMS310077.252ENSPPRG00000002761RBMS310077.027Panthera_pardus
ENSSLDG00000020276RBMS310079.582ENSPTIG00000011568RBMS310079.350Panthera_tigris_altaica
ENSSLDG00000020276RBMS310080.278ENSPTRG00000014709RBMS39980.046Pan_troglodytes
ENSSLDG00000020276RBMS310077.703ENSPANG00000010234RBMS310077.477Papio_anubis
ENSSLDG00000020276RBMS36384.074ENSPKIG00000007989-10084.074Paramormyrops_kingsleyae
ENSSLDG00000020276RBMS310080.742ENSPSIG00000005269RBMS39980.510Pelodiscus_sinensis
ENSSLDG00000020276RBMS39182.188ENSPMGG00000021683-9586.066Periophthalmus_magnuspinnatus
ENSSLDG00000020276RBMS38294.901ENSPMGG00000021544rbms38596.330Periophthalmus_magnuspinnatus
ENSSLDG00000020276RBMS39974.359ENSPEMG00000001117Rbms310075.291Peromyscus_maniculatus_bairdii
ENSSLDG00000020276RBMS38382.730ENSPCIG00000006106RBMS38884.404Phascolarctos_cinereus
ENSSLDG00000020276RBMS310095.571ENSPFOG00000017887rbms310095.571Poecilia_formosa
ENSSLDG00000020276RBMS37595.031ENSPLAG00000016866-8395.031Poecilia_latipinna
ENSSLDG00000020276RBMS39982.243ENSPMEG00000002993-9981.776Poecilia_mexicana
ENSSLDG00000020276RBMS38684.946ENSPREG00000018221-9783.712Poecilia_reticulata
ENSSLDG00000020276RBMS39995.305ENSPREG00000011880rbms39995.305Poecilia_reticulata
ENSSLDG00000020276RBMS310065.548ENSPPYG00000014050RBMS38265.393Pongo_abelii
ENSSLDG00000020276RBMS310058.837ENSPCAG00000006307RBMS39958.652Procavia_capensis
ENSSLDG00000020276RBMS310078.153ENSPCOG00000017136RBMS310077.928Propithecus_coquereli
ENSSLDG00000020276RBMS38784.000ENSPVAG00000014037RBMS38379.121Pteropus_vampyrus
ENSSLDG00000020276RBMS39982.710ENSPNYG00000012624-9982.477Pundamilia_nyererei
ENSSLDG00000020276RBMS310096.037ENSPNYG00000010546rbms310096.037Pundamilia_nyererei
ENSSLDG00000020276RBMS310081.439ENSPNAG00000001800rbms310083.759Pygocentrus_nattereri
ENSSLDG00000020276RBMS310077.262ENSRNOG00000025881Rbms310078.190Rattus_norvegicus
ENSSLDG00000020276RBMS310078.153ENSRBIG00000035863RBMS310077.928Rhinopithecus_bieti
ENSSLDG00000020276RBMS38681.414ENSRROG00000027512RBMS39381.152Rhinopithecus_roxellana
ENSSLDG00000020276RBMS310077.928ENSSBOG00000020232RBMS310077.703Saimiri_boliviensis_boliviensis
ENSSLDG00000020276RBMS38677.507ENSSHAG00000002411RBMS39480.059Sarcophilus_harrisii
ENSSLDG00000020276RBMS39983.333ENSSFOG00015008578rbms39983.099Scleropages_formosus
ENSSLDG00000020276RBMS39084.794ENSSMAG00000020065-9384.536Scophthalmus_maximus
ENSSLDG00000020276RBMS310093.939ENSSMAG00000004997rbms310096.196Scophthalmus_maximus
ENSSLDG00000020276RBMS310099.068ENSSDUG00000013656RBMS310099.068Seriola_dumerili
ENSSLDG00000020276RBMS39982.944ENSSDUG00000019287-9982.710Seriola_dumerili
ENSSLDG00000020276RBMS37669.006ENSSARG00000000695RBMS39268.824Sorex_araneus
ENSSLDG00000020276RBMS36978.738ENSSPUG00000017197RBMS39878.595Sphenodon_punctatus
ENSSLDG00000020276RBMS310098.368ENSSPAG00000020693rbms310098.368Stegastes_partitus
ENSSLDG00000020276RBMS39975.839ENSSPAG00000003983-9975.391Stegastes_partitus
ENSSLDG00000020276RBMS310080.046ENSSSCG00000036381RBMS39979.814Sus_scrofa
ENSSLDG00000020276RBMS37578.932ENSTGUG00000003572RBMS310078.806Taeniopygia_guttata
ENSSLDG00000020276RBMS310092.774ENSTRUG00000021719RBMS310094.639Takifugu_rubripes
ENSSLDG00000020276RBMS38496.000ENSTRUG00000007482-9973.318Takifugu_rubripes
ENSSLDG00000020276RBMS37682.456ENSTBEG00000005362RBMS39282.353Tupaia_belangeri
ENSSLDG00000020276RBMS39976.906ENSTTRG00000006202RBMS310076.802Tursiops_truncatus
ENSSLDG00000020276RBMS310077.405ENSUMAG00000000263RBMS39977.303Ursus_maritimus
ENSSLDG00000020276RBMS38670.833ENSVPAG00000003842RBMS39270.681Vicugna_pacos
ENSSLDG00000020276RBMS38680.519ENSVVUG00000004660RBMS39091.866Vulpes_vulpes
ENSSLDG00000020276RBMS36875.241ENSXETG00000032055RBMS39975.081Xenopus_tropicalis
ENSSLDG00000020276RBMS39167.750ENSXCOG00000019600-9569.892Xiphophorus_couchianus
ENSSLDG00000020276RBMS39982.477ENSXMAG00000014382-9982.009Xiphophorus_maculatus
ENSSLDG00000020276RBMS310094.884ENSXMAG00000021783rbms310094.884Xiphophorus_maculatus

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