EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000020308 (Gene tree)
Gene ID: -
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 10720 bases
Position: chrPEQF01098595.1:5631-16350
Accession: 111652915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000026192	Btz	PF09405.10	8.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000027006	-	645	-	ENSSLDP00000026204	214 (aa)	-	-
ENSSLDT00000026992	-	1743	XM_023403310	ENSSLDP00000026192	580 (aa)	XP_023259078	-

Gene Model

Click here to download ENSSLDG00000020308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020308	casc3	68	70.229	ENSG00000108349	CASC3	61	75.424	Homo_sapiens
ENSSLDG00000020308	casc3	100	80.286	ENSAPOG00000008467	casc3	82	78.286	Acanthochromis_polyacanthus
ENSSLDG00000020308	casc3	69	67.626	ENSAMEG00000007764	CASC3	62	76.271	Ailuropoda_melanoleuca
ENSSLDG00000020308	casc3	99	68.652	ENSACIG00000000720	casc3	83	75.299	Amphilophus_citrinellus
ENSSLDG00000020308	casc3	100	81.609	ENSAOCG00000016676	casc3	82	79.885	Amphiprion_ocellaris
ENSSLDG00000020308	casc3	100	81.034	ENSAPEG00000006787	casc3	82	79.310	Amphiprion_percula
ENSSLDG00000020308	casc3	99	83.799	ENSATEG00000017196	casc3	81	82.156	Anabas_testudineus
ENSSLDG00000020308	casc3	51	77.778	ENSANAG00000031954	-	71	77.778	Aotus_nancymaae
ENSSLDG00000020308	casc3	79	44.306	ENSANAG00000034820	-	67	57.384	Aotus_nancymaae
ENSSLDG00000020308	casc3	100	83.286	ENSACLG00000016198	casc3	82	78.348	Astatotilapia_calliptera
ENSSLDG00000020308	casc3	89	68.106	ENSAMXG00000032452	casc3	70	66.000	Astyanax_mexicanus
ENSSLDG00000020308	casc3	69	72.093	ENSBTAG00000006250	CASC3	60	77.586	Bos_taurus
ENSSLDG00000020308	casc3	90	45.141	ENSCJAG00000016032	CASC3	81	50.199	Callithrix_jacchus
ENSSLDG00000020308	casc3	70	67.626	ENSCAFG00000016141	CASC3	61	76.271	Canis_familiaris
ENSSLDG00000020308	casc3	90	48.785	ENSCAFG00020018882	CASC3	88	48.252	Canis_lupus_dingo
ENSSLDG00000020308	casc3	79	55.665	ENSCHIG00000006338	CASC3	61	76.724	Capra_hircus
ENSSLDG00000020308	casc3	67	73.333	ENSTSYG00000002975	CASC3	64	71.756	Carlito_syrichta
ENSSLDG00000020308	casc3	64	79.630	ENSCAPG00000010514	CASC3	73	71.318	Cavia_aperea
ENSSLDG00000020308	casc3	64	79.630	ENSCPOG00000015139	CASC3	62	76.724	Cavia_porcellus
ENSSLDG00000020308	casc3	66	76.271	ENSCATG00000033593	CASC3	61	76.271	Cercocebus_atys
ENSSLDG00000020308	casc3	66	75.424	ENSCLAG00000013730	CASC3	61	75.424	Chinchilla_lanigera
ENSSLDG00000020308	casc3	66	76.271	ENSCSAG00000002777	CASC3	61	76.271	Chlorocebus_sabaeus
ENSSLDG00000020308	casc3	72	61.146	ENSCPBG00000004750	CASC3	73	61.935	Chrysemys_picta_bellii
ENSSLDG00000020308	casc3	68	70.992	ENSCANG00000008814	CASC3	61	76.271	Colobus_angolensis_palliatus
ENSSLDG00000020308	casc3	98	73.164	ENSCSEG00000010047	casc3	81	69.972	Cynoglossus_semilaevis
ENSSLDG00000020308	casc3	97	77.177	ENSCVAG00000014935	casc3	80	74.170	Cyprinodon_variegatus
ENSSLDG00000020308	casc3	90	63.782	ENSDARG00000029911	casc3	75	64.074	Danio_rerio
ENSSLDG00000020308	casc3	99	31.148	ENSEBUG00000010654	casc3	51	53.704	Eptatretus_burgeri
ENSSLDG00000020308	casc3	90	48.370	ENSEASG00005002909	CASC3	88	48.193	Equus_asinus_asinus
ENSSLDG00000020308	casc3	66	76.271	ENSECAG00000019947	CASC3	53	76.271	Equus_caballus
ENSSLDG00000020308	casc3	98	60.784	ENSELUG00000015093	casc3	79	60.504	Esox_lucius
ENSSLDG00000020308	casc3	71	70.229	ENSFDAG00000020696	CASC3	78	55.224	Fukomys_damarensis
ENSSLDG00000020308	casc3	99	78.363	ENSFHEG00000015793	casc3	88	72.794	Fundulus_heteroclitus
ENSSLDG00000020308	casc3	98	76.093	ENSGAFG00000017148	casc3	76	73.913	Gambusia_affinis
ENSSLDG00000020308	casc3	80	50.485	ENSGAGG00000008432	CASC3	85	51.468	Gopherus_agassizii
ENSSLDG00000020308	casc3	66	75.424	ENSGGOG00000005067	CASC3	61	75.424	Gorilla_gorilla
ENSSLDG00000020308	casc3	100	83.003	ENSHBUG00000013155	casc3	82	78.063	Haplochromis_burtoni
ENSSLDG00000020308	casc3	68	70.229	ENSHGLG00000012117	CASC3	61	75.424	Heterocephalus_glaber_female
ENSSLDG00000020308	casc3	68	70.229	ENSHGLG00100002268	CASC3	70	70.229	Heterocephalus_glaber_male
ENSSLDG00000020308	casc3	98	70.695	ENSHCOG00000002664	casc3	76	67.372	Hippocampus_comes
ENSSLDG00000020308	casc3	71	82.171	ENSIPUG00000002679	casc3	78	64.839	Ictalurus_punctatus
ENSSLDG00000020308	casc3	80	53.403	ENSJJAG00000023525	Casc3	65	62.759	Jaculus_jaculus
ENSSLDG00000020308	casc3	98	76.093	ENSKMAG00000019507	casc3	83	74.203	Kryptolebias_marmoratus
ENSSLDG00000020308	casc3	78	92.437	ENSLBEG00000005435	casc3	81	76.323	Labrus_bergylta
ENSSLDG00000020308	casc3	75	66.351	ENSLOCG00000013518	casc3	58	65.877	Lepisosteus_oculatus
ENSSLDG00000020308	casc3	86	50.588	ENSLAFG00000000606	CASC3	61	75.424	Loxodonta_africana
ENSSLDG00000020308	casc3	66	76.271	ENSMFAG00000041496	CASC3	61	76.271	Macaca_fascicularis
ENSSLDG00000020308	casc3	66	76.271	ENSMMUG00000045187	CASC3	61	76.271	Macaca_mulatta
ENSSLDG00000020308	casc3	68	70.992	ENSMLEG00000029049	CASC3	71	70.992	Mandrillus_leucophaeus
ENSSLDG00000020308	casc3	93	79.609	ENSMAMG00000005235	casc3	78	78.212	Mastacembelus_armatus
ENSSLDG00000020308	casc3	100	83.286	ENSMZEG00005003815	casc3	82	78.348	Maylandia_zebra
ENSSLDG00000020308	casc3	57	43.280	ENSMGAG00000013247	CASC3	76	59.302	Meleagris_gallopavo
ENSSLDG00000020308	casc3	57	73.214	ENSMAUG00000006023	Casc3	60	73.214	Mesocricetus_auratus
ENSSLDG00000020308	casc3	66	75.424	ENSMICG00000003321	CASC3	64	68.613	Microcebus_murinus
ENSSLDG00000020308	casc3	80	56.021	ENSMOCG00000013644	Casc3	61	76.271	Microtus_ochrogaster
ENSSLDG00000020308	casc3	98	81.303	ENSMMOG00000014339	casc3	86	79.037	Mola_mola
ENSSLDG00000020308	casc3	94	68.197	ENSMALG00000019771	casc3	84	75.099	Monopterus_albus
ENSSLDG00000020308	casc3	69	72.222	ENSMPUG00000014903	CASC3	61	76.271	Mustela_putorius_furo
ENSSLDG00000020308	casc3	69	66.187	ENSMLUG00000010520	CASC3	60	74.576	Myotis_lucifugus
ENSSLDG00000020308	casc3	67	73.333	ENSNGAG00000023121	Casc3	61	77.119	Nannospalax_galili
ENSSLDG00000020308	casc3	88	50.479	ENSNLEG00000001598	CASC3	78	52.229	Nomascus_leucogenys
ENSSLDG00000020308	casc3	66	75.424	ENSODEG00000017858	CASC3	60	75.424	Octodon_degus
ENSSLDG00000020308	casc3	100	83.569	ENSONIG00000009337	casc3	87	80.655	Oreochromis_niloticus
ENSSLDG00000020308	casc3	77	66.906	ENSOCUG00000002954	CASC3	62	75.424	Oryctolagus_cuniculus
ENSSLDG00000020308	casc3	99	71.304	ENSORLG00000023125	casc3	78	74.834	Oryzias_latipes
ENSSLDG00000020308	casc3	77	56.684	ENSOARG00000013239	CASC3	60	77.586	Ovis_aries
ENSSLDG00000020308	casc3	68	70.229	ENSPPAG00000035069	CASC3	61	75.424	Pan_paniscus
ENSSLDG00000020308	casc3	70	66.438	ENSPPRG00000023670	CASC3	61	76.271	Panthera_pardus
ENSSLDG00000020308	casc3	68	70.229	ENSPTIG00000010891	CASC3	64	70.229	Panthera_tigris_altaica
ENSSLDG00000020308	casc3	68	70.992	ENSPANG00000021708	CASC3	61	76.271	Papio_anubis
ENSSLDG00000020308	casc3	99	59.654	ENSPKIG00000023186	casc3	58	75.373	Paramormyrops_kingsleyae
ENSSLDG00000020308	casc3	71	70.992	ENSPEMG00000009774	Casc3	62	76.271	Peromyscus_maniculatus_bairdii
ENSSLDG00000020308	casc3	97	77.914	ENSPFOG00000017632	casc3	81	89.062	Poecilia_formosa
ENSSLDG00000020308	casc3	100	78.431	ENSPLAG00000005268	casc3	88	75.362	Poecilia_latipinna
ENSSLDG00000020308	casc3	86	71.480	ENSPMEG00000010299	casc3	76	92.727	Poecilia_mexicana
ENSSLDG00000020308	casc3	99	79.191	ENSPREG00000011856	casc3	83	90.351	Poecilia_reticulata
ENSSLDG00000020308	casc3	68	70.229	ENSPPYG00000008467	CASC3	62	75.424	Pongo_abelii
ENSSLDG00000020308	casc3	66	75.424	ENSPCOG00000008183	CASC3	65	68.613	Propithecus_coquereli
ENSSLDG00000020308	casc3	66	76.271	ENSPVAG00000008556	CASC3	61	76.271	Pteropus_vampyrus
ENSSLDG00000020308	casc3	100	83.286	ENSPNYG00000011962	casc3	82	78.348	Pundamilia_nyererei
ENSSLDG00000020308	casc3	93	63.272	ENSPNAG00000015928	casc3	74	64.000	Pygocentrus_nattereri
ENSSLDG00000020308	casc3	82	51.429	ENSRNOG00000009716	Casc3	79	52.250	Rattus_norvegicus
ENSSLDG00000020308	casc3	68	70.992	ENSRBIG00000033289	CASC3	55	76.271	Rhinopithecus_bieti
ENSSLDG00000020308	casc3	66	76.271	ENSRROG00000022337	CASC3	61	76.271	Rhinopithecus_roxellana
ENSSLDG00000020308	casc3	71	59.880	ENSSBOG00000031406	CASC3	75	61.290	Saimiri_boliviensis_boliviensis
ENSSLDG00000020308	casc3	88	63.487	ENSSFOG00015002645	casc3	72	58.805	Scleropages_formosus
ENSSLDG00000020308	casc3	79	91.538	ENSSMAG00000016096	casc3	81	75.284	Scophthalmus_maximus
ENSSLDG00000020308	casc3	99	92.918	ENSSDUG00000016893	casc3	80	91.785	Seriola_dumerili
ENSSLDG00000020308	casc3	75	59.091	ENSSARG00000010378	CASC3	64	65.753	Sorex_araneus
ENSSLDG00000020308	casc3	100	86.416	ENSSPAG00000023008	casc3	81	82.899	Stegastes_partitus
ENSSLDG00000020308	casc3	84	55.495	ENSSSCG00000017477	CASC3	72	60.645	Sus_scrofa
ENSSLDG00000020308	casc3	63	73.750	ENSTGUG00000002300	CASC3	76	73.750	Taeniopygia_guttata
ENSSLDG00000020308	casc3	92	74.118	ENSTRUG00000000673	casc3	77	72.766	Takifugu_rubripes
ENSSLDG00000020308	casc3	95	75.403	ENSTNIG00000003208	casc3	80	77.397	Tetraodon_nigroviridis
ENSSLDG00000020308	casc3	58	70.423	ENSTTRG00000016896	CASC3	63	70.423	Tursiops_truncatus
ENSSLDG00000020308	casc3	90	48.438	ENSUAMG00000015116	CASC3	89	48.427	Ursus_americanus
ENSSLDG00000020308	casc3	70	65.468	ENSUMAG00000017697	CASC3	95	50.685	Ursus_maritimus
ENSSLDG00000020308	casc3	70	67.626	ENSVVUG00000000997	CASC3	61	76.271	Vulpes_vulpes
ENSSLDG00000020308	casc3	100	78.933	ENSXMAG00000013937	casc3	88	70.819	Xiphophorus_maculatus