EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000020354 (Gene tree)
Gene ID: -
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2483 bases
Position: chrPEQF01098984.1:1021620-1024102
Accession: 111660067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000026206	MMR_HSR1	PF01926.23	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000027007	-	657	XM_023413190	ENSSLDP00000026206	218 (aa)	XP_023268958	UPI000BBF174B

Gene Model

Click here to download ENSSLDG00000020354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000020354	rab42a	82	36.702	ENSSLDG00000019214	zgc:101559	80	36.702
ENSSLDG00000020354	rab42a	72	38.217	ENSSLDG00000015289	-	75	38.217
ENSSLDG00000020354	rab42a	84	41.530	ENSSLDG00000020676	rab11bb	83	41.530
ENSSLDG00000020354	rab42a	73	32.919	ENSSLDG00000022168	kras	98	31.414
ENSSLDG00000020354	rab42a	73	44.375	ENSSLDG00000022533	rab30	78	44.375
ENSSLDG00000020354	rab42a	75	36.585	ENSSLDG00000017771	rab5c	74	36.585
ENSSLDG00000020354	rab42a	94	37.681	ENSSLDG00000009725	-	91	37.681
ENSSLDG00000020354	rab42a	72	40.625	ENSSLDG00000022004	rab33a	58	40.491
ENSSLDG00000020354	rab42a	72	38.217	ENSSLDG00000012474	rab6bb	75	38.217
ENSSLDG00000020354	rab42a	100	54.587	ENSSLDG00000006360	RAB39B	100	54.587
ENSSLDG00000020354	rab42a	98	38.318	ENSSLDG00000010503	rab14	97	38.318
ENSSLDG00000020354	rab42a	83	41.667	ENSSLDG00000012091	rab25b	86	41.667
ENSSLDG00000020354	rab42a	85	30.151	ENSSLDG00000003489	rasl11a	75	30.151
ENSSLDG00000020354	rab42a	75	35.976	ENSSLDG00000011069	rab5aa	75	35.976
ENSSLDG00000020354	rab42a	84	42.077	ENSSLDG00000005221	rab11ba	83	42.077
ENSSLDG00000020354	rab42a	69	33.775	ENSSLDG00000012627	hrasb	85	32.927
ENSSLDG00000020354	rab42a	98	40.000	ENSSLDG00000012116	rab11al	95	40.000
ENSSLDG00000020354	rab42a	84	40.217	ENSSLDG00000012251	rab1ba	91	40.217
ENSSLDG00000020354	rab42a	97	33.175	ENSSLDG00000003264	rab6ba	94	33.175
ENSSLDG00000020354	rab42a	75	30.120	ENSSLDG00000013333	si:cabz01085950.1	82	30.120
ENSSLDG00000020354	rab42a	82	42.135	ENSSLDG00000018942	rab1ab	87	42.135
ENSSLDG00000020354	rab42a	79	42.775	ENSSLDG00000018024	zgc:171927	80	42.775
ENSSLDG00000020354	rab42a	84	41.530	ENSSLDG00000005275	-	83	41.530
ENSSLDG00000020354	rab42a	72	33.544	ENSSLDG00000000287	rab23	74	33.987
ENSSLDG00000020354	rab42a	78	42.012	ENSSLDG00000015823	-	84	42.012
ENSSLDG00000020354	rab42a	76	36.145	ENSSLDG00000015122	rras2	81	36.145
ENSSLDG00000020354	rab42a	61	44.444	ENSSLDG00000008584	rab33ba	62	44.444
ENSSLDG00000020354	rab42a	76	37.059	ENSSLDG00000000773	rab9a	83	37.059
ENSSLDG00000020354	rab42a	75	35.366	ENSSLDG00000020438	rab22a	84	35.366
ENSSLDG00000020354	rab42a	80	42.857	ENSSLDG00000003631	si:dkey-16l2.16	82	42.857
ENSSLDG00000020354	rab42a	72	38.217	ENSSLDG00000022282	rab41	73	38.217
ENSSLDG00000020354	rab42a	96	38.967	ENSSLDG00000023317	rab15	96	38.967
ENSSLDG00000020354	rab42a	77	32.738	ENSSLDG00000020918	RAB17	73	32.738
ENSSLDG00000020354	rab42a	77	31.737	ENSSLDG00000025169	rhebl1	88	31.737
ENSSLDG00000020354	rab42a	73	32.919	ENSSLDG00000009464	rab36	59	32.919
ENSSLDG00000020354	rab42a	67	35.811	ENSSLDG00000014812	rab34b	72	35.811
ENSSLDG00000020354	rab42a	72	38.750	ENSSLDG00000011597	si:dkey-13a21.4	77	38.750
ENSSLDG00000020354	rab42a	52	30.973	ENSSLDG00000014472	-	87	30.952
ENSSLDG00000020354	rab42a	78	41.279	ENSSLDG00000022239	rab12	70	41.279
ENSSLDG00000020354	rab42a	100	55.204	ENSSLDG00000002646	si:dkey-34d22.5	99	55.204
ENSSLDG00000020354	rab42a	75	38.323	ENSSLDG00000009351	rab9b	81	38.323
ENSSLDG00000020354	rab42a	74	34.940	ENSSLDG00000012391	RAB7A	79	34.940
ENSSLDG00000020354	rab42a	97	37.089	ENSSLDG00000010880	rab25a	95	37.089
ENSSLDG00000020354	rab42a	93	39.216	ENSSLDG00000009438	rab11a	94	39.216
ENSSLDG00000020354	rab42a	98	38.785	ENSSLDG00000005718	-	97	38.785
ENSSLDG00000020354	rab42a	87	46.316	ENSSLDG00000022555	rab2a	89	46.316
ENSSLDG00000020354	rab42a	79	43.023	ENSSLDG00000011757	-	86	43.023
ENSSLDG00000020354	rab42a	76	40.000	ENSSLDG00000006977	rab18a	80	40.000
ENSSLDG00000020354	rab42a	73	41.875	ENSSLDG00000021984	RAB15	75	41.875
ENSSLDG00000020354	rab42a	85	32.796	ENSSLDG00000018681	rheb	94	32.796
ENSSLDG00000020354	rab42a	90	31.343	ENSSLDG00000009573	rab34a	83	31.343
ENSSLDG00000020354	rab42a	84	32.990	ENSSLDG00000024959	-	93	32.990
ENSSLDG00000020354	rab42a	76	38.235	ENSSLDG00000004352	-	79	38.235
ENSSLDG00000020354	rab42a	100	55.046	ENSSLDG00000009068	-	100	55.046
ENSSLDG00000020354	rab42a	67	42.763	ENSSLDG00000008070	-	62	42.763
ENSSLDG00000020354	rab42a	69	37.500	ENSSLDG00000021833	si:ch73-116o1.2	79	36.747
ENSSLDG00000020354	rab42a	76	41.818	ENSSLDG00000006014	rab18b	80	41.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020354	rab42a	100	96.789	ENSAPOG00000009188	rab42a	100	96.789	Acanthochromis_polyacanthus
ENSSLDG00000020354	rab42a	100	97.706	ENSACIG00000003102	rab42a	100	97.706	Amphilophus_citrinellus
ENSSLDG00000020354	rab42a	100	96.330	ENSAOCG00000012921	rab42a	83	96.330	Amphiprion_ocellaris
ENSSLDG00000020354	rab42a	100	96.330	ENSAPEG00000007713	rab42a	83	96.330	Amphiprion_percula
ENSSLDG00000020354	rab42a	100	94.037	ENSATEG00000009052	rab42a	100	94.037	Anabas_testudineus
ENSSLDG00000020354	rab42a	100	96.330	ENSACLG00000007514	rab42a	100	96.330	Astatotilapia_calliptera
ENSSLDG00000020354	rab42a	100	90.367	ENSAMXG00000032729	rab42a	100	90.367	Astyanax_mexicanus
ENSSLDG00000020354	rab42a	100	94.037	ENSCSEG00000010582	rab42a	100	94.037	Cynoglossus_semilaevis
ENSSLDG00000020354	rab42a	100	91.743	ENSDARG00000034215	rab42a	100	91.743	Danio_rerio
ENSSLDG00000020354	rab42a	100	47.032	ENSDARG00000102580	CU571310.1	99	47.032	Danio_rerio
ENSSLDG00000020354	rab42a	100	89.908	ENSELUG00000010345	rab42a	100	89.908	Esox_lucius
ENSSLDG00000020354	rab42a	100	96.330	ENSFHEG00000013106	rab42a	100	96.330	Fundulus_heteroclitus
ENSSLDG00000020354	rab42a	100	96.330	ENSGAFG00000002141	rab42a	100	96.330	Gambusia_affinis
ENSSLDG00000020354	rab42a	100	96.330	ENSHBUG00000015126	rab42a	82	96.330	Haplochromis_burtoni
ENSSLDG00000020354	rab42a	100	87.615	ENSIPUG00000011376	rab42a	100	87.615	Ictalurus_punctatus
ENSSLDG00000020354	rab42a	100	95.413	ENSKMAG00000007267	rab42a	100	95.413	Kryptolebias_marmoratus
ENSSLDG00000020354	rab42a	100	96.789	ENSLBEG00000001193	rab42a	100	96.789	Labrus_bergylta
ENSSLDG00000020354	rab42a	100	64.220	ENSLACG00000012755	-	100	64.220	Latimeria_chalumnae
ENSSLDG00000020354	rab42a	100	50.685	ENSLOCG00000015825	-	99	50.685	Lepisosteus_oculatus
ENSSLDG00000020354	rab42a	100	83.486	ENSLOCG00000003453	rab42a	100	83.486	Lepisosteus_oculatus
ENSSLDG00000020354	rab42a	100	98.165	ENSMAMG00000002296	rab42a	100	98.165	Mastacembelus_armatus
ENSSLDG00000020354	rab42a	100	96.330	ENSMZEG00005012460	rab42a	82	96.330	Maylandia_zebra
ENSSLDG00000020354	rab42a	100	93.578	ENSMMOG00000014358	rab42a	100	93.578	Mola_mola
ENSSLDG00000020354	rab42a	100	96.789	ENSNBRG00000021487	rab42a	82	96.789	Neolamprologus_brichardi
ENSSLDG00000020354	rab42a	100	96.789	ENSORLG00000022335	rab42a	100	96.789	Oryzias_latipes
ENSSLDG00000020354	rab42a	100	96.789	ENSORLG00020013895	rab42a	100	96.789	Oryzias_latipes_hni
ENSSLDG00000020354	rab42a	100	96.789	ENSORLG00015004273	rab42a	100	96.789	Oryzias_latipes_hsok
ENSSLDG00000020354	rab42a	100	96.789	ENSOMEG00000020418	rab42a	100	96.789	Oryzias_melastigma
ENSSLDG00000020354	rab42a	99	46.544	ENSPKIG00000015234	-	99	46.544	Paramormyrops_kingsleyae
ENSSLDG00000020354	rab42a	100	78.082	ENSPKIG00000021215	-	100	78.082	Paramormyrops_kingsleyae
ENSSLDG00000020354	rab42a	90	97.462	ENSPMGG00000024112	rab42a	90	97.462	Periophthalmus_magnuspinnatus
ENSSLDG00000020354	rab42a	100	95.413	ENSPFOG00000004838	rab42a	82	95.413	Poecilia_formosa
ENSSLDG00000020354	rab42a	100	95.872	ENSPLAG00000005628	rab42a	100	95.872	Poecilia_latipinna
ENSSLDG00000020354	rab42a	100	95.413	ENSPMEG00000019497	rab42a	100	95.413	Poecilia_mexicana
ENSSLDG00000020354	rab42a	100	96.330	ENSPREG00000013962	rab42a	100	96.330	Poecilia_reticulata
ENSSLDG00000020354	rab42a	100	96.330	ENSPNYG00000010325	rab42a	82	96.330	Pundamilia_nyererei
ENSSLDG00000020354	rab42a	100	89.908	ENSPNAG00000016567	rab42a	100	89.908	Pygocentrus_nattereri
ENSSLDG00000020354	rab42a	100	84.404	ENSSFOG00015020732	rab42a	100	84.404	Scleropages_formosus
ENSSLDG00000020354	rab42a	100	46.119	ENSSFOG00015016000	-	97	46.119	Scleropages_formosus
ENSSLDG00000020354	rab42a	100	96.330	ENSSMAG00000020311	rab42a	100	96.330	Scophthalmus_maximus
ENSSLDG00000020354	rab42a	100	100.000	ENSSDUG00000011851	rab42a	100	100.000	Seriola_dumerili
ENSSLDG00000020354	rab42a	100	98.165	ENSSPAG00000016167	rab42a	100	98.165	Stegastes_partitus
ENSSLDG00000020354	rab42a	100	97.248	ENSTRUG00000010224	rab42a	100	97.248	Takifugu_rubripes
ENSSLDG00000020354	rab42a	100	96.789	ENSXCOG00000003428	rab42a	100	96.789	Xiphophorus_couchianus
ENSSLDG00000020354	rab42a	100	96.789	ENSXMAG00000028376	rab42a	100	96.789	Xiphophorus_maculatus