EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000020370 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-110g7.8
Alias: sb:eu2463
Full Name: si:dkey-110g7.8
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 3603 bases
Position: chrPEQF01099446.1:243084-246686
Accession: ZDB-GENE-131121-280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000026222	MMR_HSR1	PF01926.23	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000027023	-	3466	-	ENSSLDP00000026222	251 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000020370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000020370	si:dkey-110g7.8	74	31.053	ENSSLDG00000016470	-	59	31.053
ENSSLDG00000020370	si:dkey-110g7.8	74	31.746	ENSSLDG00000013116	-	66	31.746
ENSSLDG00000020370	si:dkey-110g7.8	75	32.487	ENSSLDG00000000459	-	61	32.487
ENSSLDG00000020370	si:dkey-110g7.8	74	31.500	ENSSLDG00000015860	-	63	32.000
ENSSLDG00000020370	si:dkey-110g7.8	80	34.783	ENSSLDG00000009105	-	69	34.848
ENSSLDG00000020370	si:dkey-110g7.8	87	31.278	ENSSLDG00000020672	-	71	31.278
ENSSLDG00000020370	si:dkey-110g7.8	75	35.979	ENSSLDG00000001623	-	67	36.757
ENSSLDG00000020370	si:dkey-110g7.8	67	32.164	ENSSLDG00000005620	-	56	32.164
ENSSLDG00000020370	si:dkey-110g7.8	78	37.563	ENSSLDG00000005786	-	57	39.459
ENSSLDG00000020370	si:dkey-110g7.8	88	32.599	ENSSLDG00000006746	-	95	32.599
ENSSLDG00000020370	si:dkey-110g7.8	75	32.124	ENSSLDG00000002339	-	73	32.124
ENSSLDG00000020370	si:dkey-110g7.8	71	35.714	ENSSLDG00000015850	-	73	35.714
ENSSLDG00000020370	si:dkey-110g7.8	75	31.373	ENSSLDG00000013478	-	70	31.373
ENSSLDG00000020370	si:dkey-110g7.8	75	32.124	ENSSLDG00000016457	-	55	32.124
ENSSLDG00000020370	si:dkey-110g7.8	83	31.132	ENSSLDG00000008228	-	88	31.132
ENSSLDG00000020370	si:dkey-110g7.8	76	40.933	ENSSLDG00000010531	-	79	40.933
ENSSLDG00000020370	si:dkey-110g7.8	87	37.198	ENSSLDG00000011692	-	93	37.198
ENSSLDG00000020370	si:dkey-110g7.8	74	33.158	ENSSLDG00000001533	-	66	33.158
ENSSLDG00000020370	si:dkey-110g7.8	67	32.184	ENSSLDG00000009117	-	86	32.184
ENSSLDG00000020370	si:dkey-110g7.8	86	34.211	ENSSLDG00000017869	-	80	34.211
ENSSLDG00000020370	si:dkey-110g7.8	75	36.735	ENSSLDG00000021452	-	67	36.735
ENSSLDG00000020370	si:dkey-110g7.8	74	34.211	ENSSLDG00000004473	-	74	34.211
ENSSLDG00000020370	si:dkey-110g7.8	74	35.263	ENSSLDG00000000044	-	76	35.263
ENSSLDG00000020370	si:dkey-110g7.8	73	34.921	ENSSLDG00000022829	-	77	34.921
ENSSLDG00000020370	si:dkey-110g7.8	75	32.812	ENSSLDG00000016438	-	65	32.812
ENSSLDG00000020370	si:dkey-110g7.8	87	38.265	ENSSLDG00000007079	-	77	38.265
ENSSLDG00000020370	si:dkey-110g7.8	64	33.333	ENSSLDG00000002744	-	76	33.333
ENSSLDG00000020370	si:dkey-110g7.8	72	31.383	ENSSLDG00000006736	-	65	31.472
ENSSLDG00000020370	si:dkey-110g7.8	75	37.629	ENSSLDG00000012114	-	80	37.629
ENSSLDG00000020370	si:dkey-110g7.8	75	32.124	ENSSLDG00000013126	-	54	32.124
ENSSLDG00000020370	si:dkey-110g7.8	74	36.649	ENSSLDG00000015726	-	52	36.649
ENSSLDG00000020370	si:dkey-110g7.8	74	33.333	ENSSLDG00000006704	-	64	33.333
ENSSLDG00000020370	si:dkey-110g7.8	75	30.412	ENSSLDG00000010434	-	59	31.053
ENSSLDG00000020370	si:dkey-110g7.8	74	34.574	ENSSLDG00000017256	-	58	34.574
ENSSLDG00000020370	si:dkey-110g7.8	76	31.313	ENSSLDG00000000792	-	59	31.313
ENSSLDG00000020370	si:dkey-110g7.8	76	41.451	ENSSLDG00000009168	-	75	41.451
ENSSLDG00000020370	si:dkey-110g7.8	75	37.500	ENSSLDG00000011176	-	70	36.269
ENSSLDG00000020370	si:dkey-110g7.8	74	32.105	ENSSLDG00000001606	-	65	32.105
ENSSLDG00000020370	si:dkey-110g7.8	76	30.457	ENSSLDG00000016501	-	61	30.457
ENSSLDG00000020370	si:dkey-110g7.8	75	35.233	ENSSLDG00000016509	-	68	35.233
ENSSLDG00000020370	si:dkey-110g7.8	74	35.263	ENSSLDG00000004233	-	67	34.921
ENSSLDG00000020370	si:dkey-110g7.8	63	38.788	ENSSLDG00000024641	-	82	38.788
ENSSLDG00000020370	si:dkey-110g7.8	80	30.882	ENSSLDG00000007061	-	70	30.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020370	si:dkey-110g7.8	88	77.130	ENSELUG00000010634	si:dkey-110g7.8	86	77.130	Esox_lucius
ENSSLDG00000020370	si:dkey-110g7.8	85	90.233	ENSGMOG00000014927	si:dkey-110g7.8	80	90.541	Gadus_morhua
ENSSLDG00000020370	si:dkey-110g7.8	88	96.833	ENSGACG00000008177	si:dkey-110g7.8	80	96.833	Gasterosteus_aculeatus
ENSSLDG00000020370	si:dkey-110g7.8	79	62.500	ENSPNAG00000007053	si:dkey-110g7.8	88	62.500	Pygocentrus_nattereri
ENSSLDG00000020370	si:dkey-110g7.8	88	100.000	ENSSDUG00000018096	si:dkey-110g7.8	80	100.000	Seriola_dumerili