EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000020527 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: calnexin-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 9951 bases
Position: chrPEQF01098421.1:167434-177384
Accession: 111652314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000026419	Calreticulin	PF00262.18	3.8e-163	1	1
ENSSLDP00000026463	Calreticulin	PF00262.18	1.3e-156	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000027279	-	1677	-	ENSSLDP00000026463	558 (aa)	-	-
ENSSLDT00000027234	-	3733	XM_023402545	ENSSLDP00000026419	749 (aa)	XP_023258313	-

Gene Model

Click here to download ENSSLDG00000020527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000020527	-	69	36.658	ENSSLDG00000010003	calr3b	79	37.688
ENSSLDG00000020527	-	70	34.845	ENSSLDG00000004511	calr	82	36.765
ENSSLDG00000020527	-	69	36.000	ENSSLDG00000012482	-	85	36.804
ENSSLDG00000020527	-	84	63.223	ENSSLDG00000014150	canx	91	61.172
ENSSLDG00000020527	-	66	33.505	ENSSLDG00000004583	-	83	35.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020527	-	70	36.520	ENSAMXG00000018577	-	83	36.029	Astyanax_mexicanus
ENSSLDG00000020527	-	61	40.922	ENSCAFG00000017093	CALR	82	39.000	Canis_familiaris
ENSSLDG00000020527	-	61	40.634	ENSCPBG00000023916	-	78	40.634	Chrysemys_picta_bellii
ENSSLDG00000020527	-	70	35.941	ENSDARG00000103979	calr3a	84	35.941	Danio_rerio
ENSSLDG00000020527	-	77	51.101	FBgn0264077	Cnx14D	70	53.863	Drosophila_melanogaster
ENSSLDG00000020527	-	70	35.980	FBgn0005585	Calr	86	36.118	Drosophila_melanogaster
ENSSLDG00000020527	-	68	37.879	ENSEBUG00000008568	calr3a	79	38.084	Eptatretus_burgeri
ENSSLDG00000020527	-	70	36.641	ENSELUG00000008294	-	83	36.548	Esox_lucius
ENSSLDG00000020527	-	70	37.656	ENSFHEG00000000123	-	82	37.656	Fundulus_heteroclitus
ENSSLDG00000020527	-	70	38.366	ENSMAMG00000003716	-	81	37.871	Mastacembelus_armatus
ENSSLDG00000020527	-	70	37.713	ENSMMOG00000020031	-	80	37.408	Mola_mola
ENSSLDG00000020527	-	67	39.744	ENSMLUG00000012776	-	80	40.150	Myotis_lucifugus
ENSSLDG00000020527	-	54	39.297	ENSORLG00000017171	-	74	39.172	Oryzias_latipes
ENSSLDG00000020527	-	70	38.677	ENSOMEG00000010424	-	83	38.424	Oryzias_melastigma
ENSSLDG00000020527	-	89	67.054	ENSPSIG00000009344	-	84	64.522	Pelodiscus_sinensis
ENSSLDG00000020527	-	79	65.646	ENSPSIG00000003895	-	89	61.047	Pelodiscus_sinensis
ENSSLDG00000020527	-	61	40.286	ENSPSIG00000012928	-	74	40.000	Pelodiscus_sinensis
ENSSLDG00000020527	-	70	31.840	ENSPNAG00000016813	-	83	35.627	Pygocentrus_nattereri
ENSSLDG00000020527	-	61	37.135	ENSSMAG00000005047	calr3a	72	37.135	Scophthalmus_maximus
ENSSLDG00000020527	-	97	98.900	ENSSDUG00000002378	-	98	98.900	Seriola_dumerili
ENSSLDG00000020527	-	89	77.316	ENSTRUG00000003449	-	75	80.832	Takifugu_rubripes
ENSSLDG00000020527	-	61	40.407	ENSTRUG00000004597	-	77	38.734	Takifugu_rubripes
ENSSLDG00000020527	-	61	39.193	ENSXETG00000007937	calr	69	39.193	Xenopus_tropicalis