EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000020603 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 89083 bases
Position: chrPEQF01099401.1:670893-759975
Accession: 111673617
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000026525	RRM_1	PF00076.22	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000027342	-	5018	XM_023431439	ENSSLDP00000026525	293 (aa)	XP_023287207	UPI000BBE6113

Gene Model

Click here to download ENSSLDG00000020603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020603's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000020603	-	79	58.442	ENSSLDG00000017872	raly	95	52.685
ENSSLDG00000020603	-	73	57.014	ENSSLDG00000007474	-	93	51.203
ENSSLDG00000020603	-	100	72.635	ENSSLDG00000011534	-	100	72.727
ENSSLDG00000020603	-	72	57.534	ENSSLDG00000007454	-	68	57.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020603	-	100	72.635	ENSAPOG00000008744	-	100	71.622	Acanthochromis_polyacanthus
ENSSLDG00000020603	-	97	66.438	ENSACIG00000007143	-	97	66.438	Amphilophus_citrinellus
ENSSLDG00000020603	-	100	96.587	ENSAOCG00000001605	-	100	96.587	Amphiprion_ocellaris
ENSSLDG00000020603	-	100	72.973	ENSAOCG00000023599	-	100	73.064	Amphiprion_ocellaris
ENSSLDG00000020603	-	97	65.772	ENSATEG00000022219	-	93	69.128	Anabas_testudineus
ENSSLDG00000020603	-	77	96.460	ENSATEG00000023356	-	87	96.460	Anabas_testudineus
ENSSLDG00000020603	-	100	73.220	ENSACLG00000011720	-	100	72.542	Astatotilapia_calliptera
ENSSLDG00000020603	-	100	96.928	ENSACLG00000006949	-	100	96.928	Astatotilapia_calliptera
ENSSLDG00000020603	-	100	90.785	ENSAMXG00000019031	-	100	90.444	Astyanax_mexicanus
ENSSLDG00000020603	-	100	65.436	ENSAMXG00000032617	-	100	65.772	Astyanax_mexicanus
ENSSLDG00000020603	-	100	67.003	ENSCSEG00000014237	-	100	66.667	Cynoglossus_semilaevis
ENSSLDG00000020603	-	100	71.622	ENSCVAG00000013624	-	100	72.054	Cyprinodon_variegatus
ENSSLDG00000020603	-	100	95.563	ENSCVAG00000018104	-	100	95.563	Cyprinodon_variegatus
ENSSLDG00000020603	-	58	76.608	ENSDARG00000090292	ralyl	81	78.395	Danio_rerio
ENSSLDG00000020603	-	94	75.000	ENSELUG00000001702	-	97	76.786	Esox_lucius
ENSSLDG00000020603	-	56	78.182	ENSGMOG00000005914	-	100	78.182	Gadus_morhua
ENSSLDG00000020603	-	59	94.220	ENSGACG00000004991	-	91	96.386	Gasterosteus_aculeatus
ENSSLDG00000020603	-	100	72.973	ENSHBUG00000010040	-	100	73.064	Haplochromis_burtoni
ENSSLDG00000020603	-	100	96.928	ENSHBUG00000015412	-	100	96.928	Haplochromis_burtoni
ENSSLDG00000020603	-	100	89.078	ENSIPUG00000000507	ralyl	100	89.078	Ictalurus_punctatus
ENSSLDG00000020603	-	100	69.595	ENSKMAG00000022093	-	100	70.608	Kryptolebias_marmoratus
ENSSLDG00000020603	-	100	95.222	ENSKMAG00000018155	-	100	95.222	Kryptolebias_marmoratus
ENSSLDG00000020603	-	100	72.635	ENSLBEG00000012873	-	100	72.297	Labrus_bergylta
ENSSLDG00000020603	-	100	96.246	ENSLBEG00000011011	-	100	96.246	Labrus_bergylta
ENSSLDG00000020603	-	100	82.594	ENSLOCG00000012787	ralyl	99	82.253	Lepisosteus_oculatus
ENSSLDG00000020603	-	99	69.759	ENSMAMG00000001723	-	97	69.416	Mastacembelus_armatus
ENSSLDG00000020603	-	100	73.220	ENSMZEG00005024447	-	100	72.542	Maylandia_zebra
ENSSLDG00000020603	-	98	91.438	ENSMZEG00005018748	-	99	90.411	Maylandia_zebra
ENSSLDG00000020603	-	97	66.000	ENSMMOG00000020441	-	86	67.333	Mola_mola
ENSSLDG00000020603	-	100	73.401	ENSMALG00000019019	-	78	73.401	Monopterus_albus
ENSSLDG00000020603	-	100	95.904	ENSMALG00000012952	-	100	95.904	Monopterus_albus
ENSSLDG00000020603	-	97	67.123	ENSNBRG00000011206	-	97	67.123	Neolamprologus_brichardi
ENSSLDG00000020603	-	98	92.466	ENSNBRG00000011376	-	99	92.466	Neolamprologus_brichardi
ENSSLDG00000020603	-	100	95.904	ENSORLG00000012719	-	100	95.904	Oryzias_latipes
ENSSLDG00000020603	-	100	71.622	ENSORLG00000017934	-	100	70.270	Oryzias_latipes
ENSSLDG00000020603	-	100	95.904	ENSORLG00020004438	-	100	95.904	Oryzias_latipes_hni
ENSSLDG00000020603	-	100	70.608	ENSORLG00020000082	-	100	69.932	Oryzias_latipes_hni
ENSSLDG00000020603	-	100	71.622	ENSORLG00015004280	-	100	70.270	Oryzias_latipes_hsok
ENSSLDG00000020603	-	100	95.904	ENSORLG00015004727	-	100	95.904	Oryzias_latipes_hsok
ENSSLDG00000020603	-	100	96.587	ENSOMEG00000001170	-	100	96.587	Oryzias_melastigma
ENSSLDG00000020603	-	100	71.622	ENSOMEG00000011821	-	100	70.946	Oryzias_melastigma
ENSSLDG00000020603	-	100	79.592	ENSPKIG00000015926	-	100	79.592	Paramormyrops_kingsleyae
ENSSLDG00000020603	-	99	66.667	ENSPMGG00000009532	-	99	66.667	Periophthalmus_magnuspinnatus
ENSSLDG00000020603	-	80	80.252	ENSPMGG00000014481	-	98	81.092	Periophthalmus_magnuspinnatus
ENSSLDG00000020603	-	97	69.128	ENSPFOG00000006120	-	99	69.103	Poecilia_formosa
ENSSLDG00000020603	-	97	65.278	ENSPLAG00000009877	-	76	65.292	Poecilia_latipinna
ENSSLDG00000020603	-	97	95.819	ENSPLAG00000011323	ralyl	100	95.819	Poecilia_latipinna
ENSSLDG00000020603	-	97	65.278	ENSPMEG00000013624	-	80	65.292	Poecilia_mexicana
ENSSLDG00000020603	-	97	95.819	ENSPMEG00000023847	ralyl	100	95.819	Poecilia_mexicana
ENSSLDG00000020603	-	97	91.986	ENSPREG00000001956	ralyl	100	94.425	Poecilia_reticulata
ENSSLDG00000020603	-	97	72.222	ENSPREG00000013805	-	100	67.722	Poecilia_reticulata
ENSSLDG00000020603	-	97	67.123	ENSPNYG00000008772	-	97	67.123	Pundamilia_nyererei
ENSSLDG00000020603	-	98	91.438	ENSPNYG00000003548	-	99	90.411	Pundamilia_nyererei
ENSSLDG00000020603	-	100	89.420	ENSPNAG00000000498	-	88	89.078	Pygocentrus_nattereri
ENSSLDG00000020603	-	100	67.918	ENSPNAG00000026098	-	100	67.918	Pygocentrus_nattereri
ENSSLDG00000020603	-	100	89.153	ENSSFOG00015009401	-	100	87.458	Scleropages_formosus
ENSSLDG00000020603	-	100	68.601	ENSSFOG00015004575	-	96	75.000	Scleropages_formosus
ENSSLDG00000020603	-	97	69.580	ENSSMAG00000015907	-	93	69.930	Scophthalmus_maximus
ENSSLDG00000020603	-	100	95.904	ENSSMAG00000005608	-	100	95.904	Scophthalmus_maximus
ENSSLDG00000020603	-	100	72.973	ENSSDUG00000012473	-	100	73.064	Seriola_dumerili
ENSSLDG00000020603	-	100	99.317	ENSSDUG00000007587	-	100	99.317	Seriola_dumerili
ENSSLDG00000020603	-	97	63.380	ENSSPAG00000013858	-	96	61.775	Stegastes_partitus
ENSSLDG00000020603	-	82	74.583	ENSTRUG00000003829	-	95	70.423	Takifugu_rubripes
ENSSLDG00000020603	-	97	66.780	ENSTNIG00000005594	-	99	66.780	Tetraodon_nigroviridis
ENSSLDG00000020603	-	100	69.492	ENSXETG00000017729	ralyl	99	69.492	Xenopus_tropicalis
ENSSLDG00000020603	-	97	92.881	ENSXCOG00000015156	-	93	92.881	Xiphophorus_couchianus
ENSSLDG00000020603	-	100	73.064	ENSXMAG00000007614	-	100	73.064	Xiphophorus_maculatus
ENSSLDG00000020603	-	100	96.928	ENSXMAG00000008396	-	100	96.928	Xiphophorus_maculatus