EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000020606 (Gene tree)
Gene ID: -
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 18903 bases
Position: chrPEQF01098738.1:240486-259388
Accession: 111654125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000026531	GTP_EFTU	PF00009.27	2e-62	1	1
ENSSLDP00000026569	GTP_EFTU	PF00009.27	2.2e-62	1	1
ENSSLDP00000026531	GTP_EFTU_D2	PF03144.25	1.1e-16	1	1
ENSSLDP00000026569	GTP_EFTU_D2	PF03144.25	1.7e-14	1	1
ENSSLDP00000026531	EFG_IV	PF03764.18	8.4e-38	1	1
ENSSLDP00000026569	EFG_IV	PF03764.18	9.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000027348	-	5763	XM_023405011	ENSSLDP00000026531	748 (aa)	XP_023260779	UPI000C6FB054
ENSSLDT00000027386	-	2334	-	ENSSLDP00000026569	777 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000020606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000020606	gfm1	73	38.926	ENSSLDG00000009720	-	72	38.926
ENSSLDG00000020606	gfm1	53	35.294	ENSSLDG00000022775	guf1	58	37.013
ENSSLDG00000020606	gfm1	94	33.834	ENSSLDG00000014952	gfm2	99	33.970
ENSSLDG00000020606	gfm1	83	40.960	ENSSLDG00000000387	-	96	40.960

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020606	gfm1	98	78.776	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSSLDG00000020606	gfm1	93	88.682	ENSAPOG00000016489	gfm1	99	88.682	Acanthochromis_polyacanthus
ENSSLDG00000020606	gfm1	96	81.058	ENSAMEG00000013542	GFM1	95	81.058	Ailuropoda_melanoleuca
ENSSLDG00000020606	gfm1	97	87.310	ENSACIG00000014465	gfm1	94	87.310	Amphilophus_citrinellus
ENSSLDG00000020606	gfm1	100	90.374	ENSAOCG00000006023	gfm1	100	90.374	Amphiprion_ocellaris
ENSSLDG00000020606	gfm1	100	90.107	ENSAPEG00000024499	gfm1	100	90.107	Amphiprion_percula
ENSSLDG00000020606	gfm1	100	93.048	ENSATEG00000013789	gfm1	100	93.048	Anabas_testudineus
ENSSLDG00000020606	gfm1	97	80.138	ENSAPLG00000005022	GFM1	100	80.138	Anas_platyrhynchos
ENSSLDG00000020606	gfm1	97	80.828	ENSACAG00000006829	GFM1	99	80.245	Anolis_carolinensis
ENSSLDG00000020606	gfm1	100	77.896	ENSANAG00000035983	GFM1	100	77.896	Aotus_nancymaae
ENSSLDG00000020606	gfm1	100	92.781	ENSACLG00000016586	gfm1	100	92.781	Astatotilapia_calliptera
ENSSLDG00000020606	gfm1	100	84.492	ENSAMXG00000013435	gfm1	98	85.363	Astyanax_mexicanus
ENSSLDG00000020606	gfm1	96	80.223	ENSBTAG00000027795	GFM1	98	78.571	Bos_taurus
ENSSLDG00000020606	gfm1	94	57.775	WBGene00009246	gfm-1	95	57.444	Caenorhabditis_elegans
ENSSLDG00000020606	gfm1	97	80.441	ENSCJAG00000000363	GFM1	98	79.539	Callithrix_jacchus
ENSSLDG00000020606	gfm1	98	79.973	ENSCAFG00000009006	GFM1	100	80.769	Canis_familiaris
ENSSLDG00000020606	gfm1	98	79.728	ENSCAFG00020005878	GFM1	98	81.198	Canis_lupus_dingo
ENSSLDG00000020606	gfm1	96	80.362	ENSCHIG00000015220	GFM1	98	78.571	Capra_hircus
ENSSLDG00000020606	gfm1	100	78.220	ENSTSYG00000002013	GFM1	100	78.220	Carlito_syrichta
ENSSLDG00000020606	gfm1	96	70.442	ENSCAPG00000005699	GFM1	97	70.442	Cavia_aperea
ENSSLDG00000020606	gfm1	100	78.117	ENSCPOG00000001194	GFM1	100	78.117	Cavia_porcellus
ENSSLDG00000020606	gfm1	97	79.890	ENSCCAG00000025561	GFM1	97	79.890	Cebus_capucinus
ENSSLDG00000020606	gfm1	100	78.296	ENSCATG00000037622	GFM1	100	78.296	Cercocebus_atys
ENSSLDG00000020606	gfm1	97	79.339	ENSCLAG00000002503	GFM1	97	78.854	Chinchilla_lanigera
ENSSLDG00000020606	gfm1	100	78.429	ENSCSAG00000012162	GFM1	100	78.429	Chlorocebus_sabaeus
ENSSLDG00000020606	gfm1	100	69.496	ENSCHOG00000004867	GFM1	100	69.496	Choloepus_hoffmanni
ENSSLDG00000020606	gfm1	100	79.545	ENSCPBG00000018367	GFM1	99	79.545	Chrysemys_picta_bellii
ENSSLDG00000020606	gfm1	94	59.021	ENSCING00000011960	-	93	59.021	Ciona_intestinalis
ENSSLDG00000020606	gfm1	94	60.482	ENSCSAVG00000008514	-	99	59.544	Ciona_savignyi
ENSSLDG00000020606	gfm1	98	79.320	ENSCANG00000031714	GFM1	100	78.162	Colobus_angolensis_palliatus
ENSSLDG00000020606	gfm1	100	77.763	ENSCGRG00001022095	GFM1	100	77.763	Cricetulus_griseus_chok1gshd
ENSSLDG00000020606	gfm1	100	77.763	ENSCGRG00000012043	GFM1	100	77.763	Cricetulus_griseus_crigri
ENSSLDG00000020606	gfm1	97	84.371	ENSCSEG00000017088	gfm1	99	84.371	Cynoglossus_semilaevis
ENSSLDG00000020606	gfm1	100	92.112	ENSCVAG00000004126	gfm1	100	92.112	Cyprinodon_variegatus
ENSSLDG00000020606	gfm1	100	82.754	ENSDARG00000063624	gfm1	100	82.754	Danio_rerio
ENSSLDG00000020606	gfm1	55	79.218	ENSDNOG00000016385	-	100	79.218	Dasypus_novemcinctus
ENSSLDG00000020606	gfm1	99	77.358	ENSDORG00000014165	Gfm1	98	77.358	Dipodomys_ordii
ENSSLDG00000020606	gfm1	95	68.688	FBgn0263133	mEFG1	95	68.688	Drosophila_melanogaster
ENSSLDG00000020606	gfm1	96	72.677	ENSETEG00000019197	GFM1	98	71.332	Echinops_telfairi
ENSSLDG00000020606	gfm1	90	63.111	ENSEBUG00000012794	gfm1	100	63.111	Eptatretus_burgeri
ENSSLDG00000020606	gfm1	96	59.444	ENSEEUG00000000429	GFM1	99	59.444	Erinaceus_europaeus
ENSSLDG00000020606	gfm1	100	86.096	ENSELUG00000014728	gfm1	100	86.096	Esox_lucius
ENSSLDG00000020606	gfm1	97	80.028	ENSFCAG00000013291	GFM1	98	78.869	Felis_catus
ENSSLDG00000020606	gfm1	90	80.296	ENSFALG00000007619	GFM1	100	80.296	Ficedula_albicollis
ENSSLDG00000020606	gfm1	100	77.454	ENSFDAG00000016559	GFM1	100	77.454	Fukomys_damarensis
ENSSLDG00000020606	gfm1	100	90.909	ENSFHEG00000006091	gfm1	100	90.909	Fundulus_heteroclitus
ENSSLDG00000020606	gfm1	97	86.520	ENSGMOG00000010161	gfm1	100	86.520	Gadus_morhua
ENSSLDG00000020606	gfm1	97	79.586	ENSGALG00000009634	GFM1	99	79.287	Gallus_gallus
ENSSLDG00000020606	gfm1	100	90.107	ENSGAFG00000012527	gfm1	100	90.107	Gambusia_affinis
ENSSLDG00000020606	gfm1	100	90.387	ENSGACG00000009864	gfm1	100	90.387	Gasterosteus_aculeatus
ENSSLDG00000020606	gfm1	98	79.048	ENSGGOG00000003085	GFM1	100	77.896	Gorilla_gorilla
ENSSLDG00000020606	gfm1	100	92.914	ENSHBUG00000002120	gfm1	100	92.914	Haplochromis_burtoni
ENSSLDG00000020606	gfm1	97	78.650	ENSHGLG00000016855	GFM1	100	76.393	Heterocephalus_glaber_female
ENSSLDG00000020606	gfm1	97	78.650	ENSHGLG00100013049	GFM1	100	76.393	Heterocephalus_glaber_male
ENSSLDG00000020606	gfm1	100	90.241	ENSHCOG00000007638	gfm1	100	90.241	Hippocampus_comes
ENSSLDG00000020606	gfm1	100	84.893	ENSIPUG00000005873	gfm1	100	84.893	Ictalurus_punctatus
ENSSLDG00000020606	gfm1	97	78.650	ENSSTOG00000010150	GFM1	98	78.650	Ictidomys_tridecemlineatus
ENSSLDG00000020606	gfm1	100	77.497	ENSJJAG00000016447	Gfm1	100	77.497	Jaculus_jaculus
ENSSLDG00000020606	gfm1	100	86.497	ENSKMAG00000020768	gfm1	100	86.497	Kryptolebias_marmoratus
ENSSLDG00000020606	gfm1	94	90.728	ENSLBEG00000021315	gfm1	100	90.728	Labrus_bergylta
ENSSLDG00000020606	gfm1	100	80.481	ENSLACG00000012295	GFM1	100	80.481	Latimeria_chalumnae
ENSSLDG00000020606	gfm1	97	79.617	ENSLOCG00000003778	gfm1	100	79.617	Lepisosteus_oculatus
ENSSLDG00000020606	gfm1	99	76.800	ENSLAFG00000010945	GFM1	99	77.500	Loxodonta_africana
ENSSLDG00000020606	gfm1	100	78.162	ENSMFAG00000035731	GFM1	100	78.162	Macaca_fascicularis
ENSSLDG00000020606	gfm1	100	78.162	ENSMMUG00000004961	GFM1	100	78.162	Macaca_mulatta
ENSSLDG00000020606	gfm1	100	78.029	ENSMNEG00000033245	GFM1	100	78.029	Macaca_nemestrina
ENSSLDG00000020606	gfm1	97	78.483	ENSMLEG00000030908	GFM1	99	78.108	Mandrillus_leucophaeus
ENSSLDG00000020606	gfm1	100	92.246	ENSMAMG00000011760	gfm1	100	92.246	Mastacembelus_armatus
ENSSLDG00000020606	gfm1	100	92.914	ENSMZEG00005016639	gfm1	100	92.914	Maylandia_zebra
ENSSLDG00000020606	gfm1	97	79.558	ENSMGAG00000010641	GFM1	97	79.558	Meleagris_gallopavo
ENSSLDG00000020606	gfm1	97	79.862	ENSMAUG00000000611	Gfm1	99	78.841	Mesocricetus_auratus
ENSSLDG00000020606	gfm1	97	80.441	ENSMICG00000049086	GFM1	99	78.382	Microcebus_murinus
ENSSLDG00000020606	gfm1	100	77.896	ENSMOCG00000000465	Gfm1	100	77.896	Microtus_ochrogaster
ENSSLDG00000020606	gfm1	97	91.460	ENSMMOG00000012538	gfm1	98	91.460	Mola_mola
ENSSLDG00000020606	gfm1	99	78.562	ENSMODG00000015673	GFM1	99	78.562	Monodelphis_domestica
ENSSLDG00000020606	gfm1	96	89.819	ENSMALG00000012508	gfm1	95	89.819	Monopterus_albus
ENSSLDG00000020606	gfm1	96	80.474	MGP_CAROLIEiJ_G0025052	Gfm1	98	78.833	Mus_caroli
ENSSLDG00000020606	gfm1	96	80.474	ENSMUSG00000027774	Gfm1	98	78.833	Mus_musculus
ENSSLDG00000020606	gfm1	100	77.630	MGP_PahariEiJ_G0026495	Gfm1	100	77.630	Mus_pahari
ENSSLDG00000020606	gfm1	96	80.474	MGP_SPRETEiJ_G0025994	Gfm1	98	78.833	Mus_spretus
ENSSLDG00000020606	gfm1	97	80.716	ENSMPUG00000002859	GFM1	98	79.542	Mustela_putorius_furo
ENSSLDG00000020606	gfm1	97	80.716	ENSMLUG00000000452	GFM1	98	79.542	Myotis_lucifugus
ENSSLDG00000020606	gfm1	100	77.600	ENSNGAG00000012375	Gfm1	100	77.600	Nannospalax_galili
ENSSLDG00000020606	gfm1	97	92.720	ENSNBRG00000004631	gfm1	99	92.720	Neolamprologus_brichardi
ENSSLDG00000020606	gfm1	97	79.752	ENSNLEG00000004176	GFM1	100	77.896	Nomascus_leucogenys
ENSSLDG00000020606	gfm1	91	71.324	ENSMEUG00000007784	GFM1	99	71.324	Notamacropus_eugenii
ENSSLDG00000020606	gfm1	100	77.437	ENSOPRG00000009860	GFM1	100	77.437	Ochotona_princeps
ENSSLDG00000020606	gfm1	98	79.428	ENSODEG00000004316	GFM1	100	77.984	Octodon_degus
ENSSLDG00000020606	gfm1	100	92.781	ENSONIG00000003772	gfm1	100	92.781	Oreochromis_niloticus
ENSSLDG00000020606	gfm1	98	79.564	ENSOCUG00000013561	GFM1	98	79.296	Oryctolagus_cuniculus
ENSSLDG00000020606	gfm1	95	90.113	ENSORLG00000006487	gfm1	100	90.113	Oryzias_latipes
ENSSLDG00000020606	gfm1	100	89.305	ENSORLG00020003362	gfm1	100	89.305	Oryzias_latipes_hni
ENSSLDG00000020606	gfm1	100	89.171	ENSORLG00015005829	gfm1	100	89.171	Oryzias_latipes_hsok
ENSSLDG00000020606	gfm1	100	90.909	ENSOMEG00000012894	gfm1	100	90.909	Oryzias_melastigma
ENSSLDG00000020606	gfm1	97	79.477	ENSOGAG00000008298	GFM1	98	78.331	Otolemur_garnettii
ENSSLDG00000020606	gfm1	96	79.473	ENSOARG00000002409	GFM1	99	79.473	Ovis_aries
ENSSLDG00000020606	gfm1	98	79.048	ENSPPAG00000033881	GFM1	100	77.896	Pan_paniscus
ENSSLDG00000020606	gfm1	97	80.028	ENSPPRG00000009281	GFM1	98	78.869	Panthera_pardus
ENSSLDG00000020606	gfm1	97	79.890	ENSPTIG00000012416	GFM1	98	78.735	Panthera_tigris_altaica
ENSSLDG00000020606	gfm1	98	79.048	ENSPTRG00000015570	GFM1	100	77.896	Pan_troglodytes
ENSSLDG00000020606	gfm1	100	78.162	ENSPANG00000016512	GFM1	100	78.162	Papio_anubis
ENSSLDG00000020606	gfm1	100	84.225	ENSPKIG00000004876	gfm1	100	84.225	Paramormyrops_kingsleyae
ENSSLDG00000020606	gfm1	100	79.814	ENSPSIG00000012567	GFM1	99	80.593	Pelodiscus_sinensis
ENSSLDG00000020606	gfm1	97	88.552	ENSPMGG00000014068	gfm1	100	88.552	Periophthalmus_magnuspinnatus
ENSSLDG00000020606	gfm1	100	77.630	ENSPEMG00000008942	Gfm1	100	77.630	Peromyscus_maniculatus_bairdii
ENSSLDG00000020606	gfm1	86	76.791	ENSPCIG00000020195	GFM1	98	77.760	Phascolarctos_cinereus
ENSSLDG00000020606	gfm1	100	90.508	ENSPFOG00000011022	gfm1	100	90.508	Poecilia_formosa
ENSSLDG00000020606	gfm1	99	89.744	ENSPLAG00000019585	gfm1	100	90.309	Poecilia_latipinna
ENSSLDG00000020606	gfm1	100	90.374	ENSPMEG00000012376	gfm1	100	90.374	Poecilia_mexicana
ENSSLDG00000020606	gfm1	100	90.642	ENSPREG00000001332	gfm1	95	90.642	Poecilia_reticulata
ENSSLDG00000020606	gfm1	98	78.776	ENSPPYG00000014244	GFM1	100	77.630	Pongo_abelii
ENSSLDG00000020606	gfm1	94	79.090	ENSPCAG00000008934	GFM1	100	79.090	Procavia_capensis
ENSSLDG00000020606	gfm1	97	80.165	ENSPCOG00000022259	GFM1	99	77.984	Propithecus_coquereli
ENSSLDG00000020606	gfm1	97	79.614	ENSPVAG00000013605	GFM1	98	78.466	Pteropus_vampyrus
ENSSLDG00000020606	gfm1	100	92.647	ENSPNYG00000006037	gfm1	100	92.647	Pundamilia_nyererei
ENSSLDG00000020606	gfm1	100	85.027	ENSPNAG00000001237	gfm1	100	85.027	Pygocentrus_nattereri
ENSSLDG00000020606	gfm1	97	80.000	ENSRNOG00000012873	Gfm1	99	78.976	Rattus_norvegicus
ENSSLDG00000020606	gfm1	98	79.320	ENSRBIG00000031363	GFM1	100	78.162	Rhinopithecus_bieti
ENSSLDG00000020606	gfm1	98	79.456	ENSRROG00000031081	GFM1	100	78.296	Rhinopithecus_roxellana
ENSSLDG00000020606	gfm1	96	55.234	YLR069C	-	94	55.234	Saccharomyces_cerevisiae
ENSSLDG00000020606	gfm1	100	78.162	ENSSBOG00000023252	GFM1	100	78.162	Saimiri_boliviensis_boliviensis
ENSSLDG00000020606	gfm1	97	80.636	ENSSHAG00000017772	GFM1	99	78.898	Sarcophilus_harrisii
ENSSLDG00000020606	gfm1	100	83.845	ENSSFOG00015003117	gfm1	100	83.845	Scleropages_formosus
ENSSLDG00000020606	gfm1	100	92.513	ENSSMAG00000013221	gfm1	100	92.513	Scophthalmus_maximus
ENSSLDG00000020606	gfm1	100	99.733	ENSSDUG00000018665	gfm1	100	99.733	Seriola_dumerili
ENSSLDG00000020606	gfm1	99	77.341	ENSSPUG00000018686	GFM1	98	78.453	Sphenodon_punctatus
ENSSLDG00000020606	gfm1	100	92.914	ENSSPAG00000008800	gfm1	100	92.914	Stegastes_partitus
ENSSLDG00000020606	gfm1	96	80.362	ENSSSCG00000025651	GFM1	98	78.706	Sus_scrofa
ENSSLDG00000020606	gfm1	100	87.968	ENSTRUG00000009244	gfm1	100	87.968	Takifugu_rubripes
ENSSLDG00000020606	gfm1	100	90.374	ENSTNIG00000007729	gfm1	100	90.374	Tetraodon_nigroviridis
ENSSLDG00000020606	gfm1	90	71.852	ENSTBEG00000017404	GFM1	89	71.852	Tupaia_belangeri
ENSSLDG00000020606	gfm1	96	80.223	ENSTTRG00000001735	GFM1	95	80.223	Tursiops_truncatus
ENSSLDG00000020606	gfm1	97	80.303	ENSUAMG00000026381	GFM1	98	79.004	Ursus_americanus
ENSSLDG00000020606	gfm1	97	80.303	ENSUMAG00000011268	GFM1	98	79.004	Ursus_maritimus
ENSSLDG00000020606	gfm1	97	76.828	ENSVPAG00000009444	GFM1	98	75.741	Vicugna_pacos
ENSSLDG00000020606	gfm1	98	79.645	ENSVVUG00000020091	GFM1	100	80.473	Vulpes_vulpes
ENSSLDG00000020606	gfm1	100	80.851	ENSXETG00000032551	GFM1	100	80.851	Xenopus_tropicalis
ENSSLDG00000020606	gfm1	54	86.486	ENSXCOG00000012590	gfm1	94	86.486	Xiphophorus_couchianus
ENSSLDG00000020606	gfm1	100	90.508	ENSXMAG00000000261	gfm1	100	90.508	Xiphophorus_maculatus