EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000020613 (Gene tree)
Gene ID
-
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Minus strand
Length
13645 bases
Position
chrPEQF01099137.1:19451-33095
Accession
111665746
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000026646RNA_pol_Rpb1_5PF04998.172e-10111
ENSSLDP00000026588RNA_pol_Rpb1_5PF04998.172.1e-10111
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-29131
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-29231
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-29331
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-29431
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-29531
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-29631
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-29731
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-29831
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-29931
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-291031
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-291131
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-291231
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-291331
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-291431
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-291531
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-291631
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-291731
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-291831
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-291931
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-292031
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-292131
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-292231
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-292331
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-292431
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-292531
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-292631
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-292731
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-292831
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-292931
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-293031
ENSSLDP00000026646RNA_pol_Rpb1_RPF05001.133.8e-293131
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-23132
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-23232
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-23332
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-23432
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-23532
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-23632
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-23732
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-23832
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-23932
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-231032
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-231132
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-231232
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-231332
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-231432
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-231532
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-231632
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-231732
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-231832
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-231932
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-232032
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-232132
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-232232
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-232332
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-232432
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-232532
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-232632
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-232732
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-232832
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-232932
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-233032
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-233132
ENSSLDP00000026588RNA_pol_Rpb1_RPF05001.131e-233232
ENSSLDP00000026646RNA_pol_Rpb1_4PF05000.171.2e-3711
ENSSLDP00000026588RNA_pol_Rpb1_4PF05000.171.2e-3711
ENSSLDP00000026646RNA_pol_Rpb1_2PF00623.205.8e-7511
ENSSLDP00000026588RNA_pol_Rpb1_2PF00623.206e-7511
ENSSLDP00000026646RNA_pol_Rpb1_3PF04983.182.8e-5011
ENSSLDP00000026588RNA_pol_Rpb1_3PF04983.183e-5011
ENSSLDP00000026646RNA_pol_Rpb1_1PF04997.125e-10911
ENSSLDP00000026588RNA_pol_Rpb1_1PF04997.125.2e-10911
ENSSLDP00000026588RNA_pol_Rpb1_7PF04990.122e-5511
ENSSLDP00000026646RNA_pol_Rpb1_7PF04990.126.3e-5511
ENSSLDP00000026646RNA_pol_Rpb1_6PF04992.141.3e-6611
ENSSLDP00000026588RNA_pol_Rpb1_6PF04992.141.4e-6611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000027405-9001XM_023420821ENSSLDP000000265881966 (aa)XP_023276589UPI000C6FA831
ENSSLDT00000027463-5787-ENSSLDP000000266461928 (aa)--
Gene Model
Click here to download ENSSLDG00000020613's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020613's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000020613polr2a6838.631ENSSLDG00000023908polr3a9138.631
ENSSLDG00000020613polr2a5139.007ENSSLDG00000024095polr1a6148.958
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000020613polr2a8799.069ENSAPOG00000006552polr2a9099.069Acanthochromis_polyacanthus
ENSSLDG00000020613polr2a8294.052ENSAMEG00000016265-8294.059Ailuropoda_melanoleuca
ENSSLDG00000020613polr2a10098.755ENSACIG00000015982polr2a10098.755Amphilophus_citrinellus
ENSSLDG00000020613polr2a10097.092ENSAOCG00000004255polr2a10095.280Amphiprion_ocellaris
ENSSLDG00000020613polr2a10099.339ENSAPEG00000012623polr2a10099.339Amphiprion_percula
ENSSLDG00000020613polr2a10098.932ENSATEG00000019644polr2a10098.932Anabas_testudineus
ENSSLDG00000020613polr2a8295.031ENSACAG00000014561POLR2A8295.037Anolis_carolinensis
ENSSLDG00000020613polr2a8294.413ENSANAG00000020093-8294.603Aotus_nancymaae
ENSSLDG00000020613polr2a10098.728ENSACLG00000006735polr2a10098.728Astatotilapia_calliptera
ENSSLDG00000020613polr2a10097.977ENSAMXG00000020046polr2a10097.977Astyanax_mexicanus
ENSSLDG00000020613polr2a8294.413ENSBTAG00000046765POLR2A8294.420Bos_taurus
ENSSLDG00000020613polr2a9870.238WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSSLDG00000020613polr2a8694.351ENSCAFG00000016532POLR2A9994.358Canis_familiaris
ENSSLDG00000020613polr2a8293.486ENSCAFG00020007929-8293.494Canis_lupus_dingo
ENSSLDG00000020613polr2a8294.413ENSCHIG00000027173-8294.420Capra_hircus
ENSSLDG00000020613polr2a9292.115ENSTSYG00000012803-8591.708Carlito_syrichta
ENSSLDG00000020613polr2a9890.939ENSCAPG00000001882-10093.489Cavia_aperea
ENSSLDG00000020613polr2a9988.822ENSCPOG00000014812-10093.242Cavia_porcellus
ENSSLDG00000020613polr2a8294.413ENSCCAG00000020938-8294.603Cebus_capucinus
ENSSLDG00000020613polr2a8294.413ENSCATG00000013680-8294.420Cercocebus_atys
ENSSLDG00000020613polr2a8294.289ENSCLAG00000012196-8294.476Chinchilla_lanigera
ENSSLDG00000020613polr2a8285.626ENSCSAG00000011644-8285.644Chlorocebus_sabaeus
ENSSLDG00000020613polr2a9184.022ENSCPBG00000012697POLR2A9985.964Chrysemys_picta_bellii
ENSSLDG00000020613polr2a9876.853ENSCING00000007884-9977.413Ciona_intestinalis
ENSSLDG00000020613polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSSLDG00000020613polr2a8293.731ENSCANG00000010622-8293.738Colobus_angolensis_palliatus
ENSSLDG00000020613polr2a8189.320ENSCGRG00001003538Polr2a8189.333Cricetulus_griseus_chok1gshd
ENSSLDG00000020613polr2a8290.675ENSCGRG00000012105Polr2a9390.686Cricetulus_griseus_crigri
ENSSLDG00000020613polr2a9998.028ENSCSEG00000002635polr2a10098.028Cynoglossus_semilaevis
ENSSLDG00000020613polr2a10098.627ENSCVAG00000005156polr2a10098.627Cyprinodon_variegatus
ENSSLDG00000020613polr2a10097.407ENSDARG00000099966polr2a10097.407Danio_rerio
ENSSLDG00000020613polr2a8291.682ENSDNOG00000016482-8291.692Dasypus_novemcinctus
ENSSLDG00000020613polr2a8294.413ENSDORG00000008667Polr2a8294.603Dipodomys_ordii
ENSSLDG00000020613polr2a9970.148FBgn0003277RpII2159974.471Drosophila_melanogaster
ENSSLDG00000020613polr2a9490.000ENSETEG00000002540-8791.096Echinops_telfairi
ENSSLDG00000020613polr2a8287.586ENSEBUG00000013967polr2a8287.570Eptatretus_burgeri
ENSSLDG00000020613polr2a8292.365ENSEASG00005019114-8392.374Equus_asinus_asinus
ENSSLDG00000020613polr2a8294.413ENSECAG00000018485POLR2A8294.420Equus_caballus
ENSSLDG00000020613polr2a8594.326ENSEEUG00000001154-9594.326Erinaceus_europaeus
ENSSLDG00000020613polr2a8895.268ENSELUG00000014284polr2a8495.268Esox_lucius
ENSSLDG00000020613polr2a8294.475ENSFDAG00000008287-8294.482Fukomys_damarensis
ENSSLDG00000020613polr2a9998.382ENSFHEG00000001768polr2a10098.382Fundulus_heteroclitus
ENSSLDG00000020613polr2a9993.072ENSGMOG00000007725polr2a10093.072Gadus_morhua
ENSSLDG00000020613polr2a99100.000ENSGAFG00000005389polr2a10093.674Gambusia_affinis
ENSSLDG00000020613polr2a9994.861ENSGACG00000019366polr2a10094.644Gasterosteus_aculeatus
ENSSLDG00000020613polr2a8292.322ENSGGOG00000014800-9692.995Gorilla_gorilla
ENSSLDG00000020613polr2a9998.688ENSHBUG00000018937polr2a10098.688Haplochromis_burtoni
ENSSLDG00000020613polr2a8294.475ENSHGLG00000012381POLR2A8294.667Heterocephalus_glaber_female
ENSSLDG00000020613polr2a8294.475ENSHGLG00100014843POLR2A8294.667Heterocephalus_glaber_male
ENSSLDG00000020613polr2a10098.067ENSHCOG00000011874polr2a10098.067Hippocampus_comes
ENSSLDG00000020613polr2a10097.562ENSIPUG00000002613Polr2a10097.562Ictalurus_punctatus
ENSSLDG00000020613polr2a8294.413ENSSTOG00000001304-8294.603Ictidomys_tridecemlineatus
ENSSLDG00000020613polr2a8294.413ENSJJAG00000013049Polr2a8294.603Jaculus_jaculus
ENSSLDG00000020613polr2a82100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSSLDG00000020613polr2a9998.830ENSLBEG00000027652polr2a10098.830Labrus_bergylta
ENSSLDG00000020613polr2a8085.579ENSLACG00000012071POLR2A8185.651Latimeria_chalumnae
ENSSLDG00000020613polr2a8997.164ENSLOCG00000013863polr2a9796.710Lepisosteus_oculatus
ENSSLDG00000020613polr2a9991.166ENSLAFG00000008626-9794.420Loxodonta_africana
ENSSLDG00000020613polr2a5193.258ENSMFAG00000007042-9993.258Macaca_fascicularis
ENSSLDG00000020613polr2a8294.413ENSMMUG00000023620-9194.420Macaca_mulatta
ENSSLDG00000020613polr2a8293.979ENSMNEG00000040407-8293.986Macaca_nemestrina
ENSSLDG00000020613polr2a8090.078ENSMLEG00000030263-9993.258Mandrillus_leucophaeus
ENSSLDG00000020613polr2a10099.237ENSMAMG00000003351polr2a10099.237Mastacembelus_armatus
ENSSLDG00000020613polr2a10098.728ENSMZEG00005021429polr2a10098.728Maylandia_zebra
ENSSLDG00000020613polr2a5194.088ENSMAUG00000021055-9994.088Mesocricetus_auratus
ENSSLDG00000020613polr2a8294.351ENSMICG00000013372-9893.654Microcebus_murinus
ENSSLDG00000020613polr2a9992.132ENSMOCG00000018279Polr2a10092.142Microtus_ochrogaster
ENSSLDG00000020613polr2a9097.891ENSMMOG00000012515polr2a9297.891Mola_mola
ENSSLDG00000020613polr2a8294.289ENSMODG00000007009-8294.296Monodelphis_domestica
ENSSLDG00000020613polr2a9495.787ENSMALG00000008716polr2a9998.793Monopterus_albus
ENSSLDG00000020613polr2a8294.413MGP_CAROLIEiJ_G0016587Polr2a8294.603Mus_caroli
ENSSLDG00000020613polr2a8294.413ENSMUSG00000005198Polr2a8294.603Mus_musculus
ENSSLDG00000020613polr2a8292.274MGP_PahariEiJ_G0017718Polr2a8292.284Mus_pahari
ENSSLDG00000020613polr2a8294.413MGP_SPRETEiJ_G0017423Polr2a8294.603Mus_spretus
ENSSLDG00000020613polr2a8294.413ENSMPUG00000009648-8294.420Mustela_putorius_furo
ENSSLDG00000020613polr2a8293.924ENSMLUG00000009088-8293.932Myotis_lucifugus
ENSSLDG00000020613polr2a8294.413ENSNGAG00000002543Polr2a8294.603Nannospalax_galili
ENSSLDG00000020613polr2a10098.755ENSNBRG00000002005polr2a10098.755Neolamprologus_brichardi
ENSSLDG00000020613polr2a8194.596ENSNLEG00000009460-8294.603Nomascus_leucogenys
ENSSLDG00000020613polr2a9495.316ENSMEUG00000008611-9395.316Notamacropus_eugenii
ENSSLDG00000020613polr2a8094.125ENSOPRG00000015116-9994.125Ochotona_princeps
ENSSLDG00000020613polr2a8794.322ENSODEG00000017674-8589.951Octodon_degus
ENSSLDG00000020613polr2a10098.983ENSONIG00000009231polr2a10098.983Oreochromis_niloticus
ENSSLDG00000020613polr2a9990.345ENSOCUG00000017929-10094.296Oryctolagus_cuniculus
ENSSLDG00000020613polr2a10098.340ENSORLG00000006431polr2a10098.340Oryzias_latipes
ENSSLDG00000020613polr2a10098.340ENSORLG00020010235polr2a10098.340Oryzias_latipes_hni
ENSSLDG00000020613polr2a10098.237ENSORLG00015007075polr2a10098.237Oryzias_latipes_hsok
ENSSLDG00000020613polr2a9895.582ENSOMEG00000010713polr2a10097.946Oryzias_melastigma
ENSSLDG00000020613polr2a8294.413ENSOGAG00000033608-8294.420Otolemur_garnettii
ENSSLDG00000020613polr2a9194.413ENSOARG00000013874-9091.692Ovis_aries
ENSSLDG00000020613polr2a8194.498ENSPPAG00000043734-8990.154Pan_paniscus
ENSSLDG00000020613polr2a8194.596ENSPTRG00000008691POLR2A8294.603Pan_troglodytes
ENSSLDG00000020613polr2a8293.731ENSPANG00000024099-8293.905Papio_anubis
ENSSLDG00000020613polr2a7795.564ENSPKIG00000005727polr2a8595.564Paramormyrops_kingsleyae
ENSSLDG00000020613polr2a9892.831ENSPSIG00000014006POLR2A10092.751Pelodiscus_sinensis
ENSSLDG00000020613polr2a10097.945ENSPMGG00000019734polr2a10097.945Periophthalmus_magnuspinnatus
ENSSLDG00000020613polr2a8294.413ENSPEMG00000012521Polr2a8294.603Peromyscus_maniculatus_bairdii
ENSSLDG00000020613polr2a8694.293ENSPCIG00000028851-8294.293Phascolarctos_cinereus
ENSSLDG00000020613polr2a9998.522ENSPFOG00000007890polr2a9998.522Poecilia_formosa
ENSSLDG00000020613polr2a9998.522ENSPLAG00000007399polr2a9998.522Poecilia_latipinna
ENSSLDG00000020613polr2a10098.546ENSPMEG00000002071polr2a9998.546Poecilia_mexicana
ENSSLDG00000020613polr2a10098.548ENSPREG00000013122polr2a10098.548Poecilia_reticulata
ENSSLDG00000020613polr2a8294.413ENSPPYG00000007924-8294.420Pongo_abelii
ENSSLDG00000020613polr2a7495.263ENSPCAG00000006951-7495.263Procavia_capensis
ENSSLDG00000020613polr2a8194.596ENSPCOG00000025260-8294.603Propithecus_coquereli
ENSSLDG00000020613polr2a8294.103ENSPVAG00000005069-8294.110Pteropus_vampyrus
ENSSLDG00000020613polr2a10098.678ENSPNYG00000022340polr2a10098.678Pundamilia_nyererei
ENSSLDG00000020613polr2a10098.067ENSPNAG00000011237polr2a10098.067Pygocentrus_nattereri
ENSSLDG00000020613polr2a8294.351ENSRNOG00000028834Polr2a8294.358Rattus_norvegicus
ENSSLDG00000020613polr2a8294.041ENSRBIG00000002471-9194.048Rhinopithecus_bieti
ENSSLDG00000020613polr2a8294.413ENSRROG00000029583-8993.552Rhinopithecus_roxellana
ENSSLDG00000020613polr2a8450.522YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSSLDG00000020613polr2a8294.413ENSSBOG00000000808-8294.603Saimiri_boliviensis_boliviensis
ENSSLDG00000020613polr2a9394.289ENSSHAG00000002858-8494.296Sarcophilus_harrisii
ENSSLDG00000020613polr2a9997.617ENSSFOG00015023275polr2a10097.617Scleropages_formosus
ENSSLDG00000020613polr2a10096.389ENSSMAG00000009137polr2a10095.880Scophthalmus_maximus
ENSSLDG00000020613polr2a10099.949ENSSDUG00000020466polr2a10099.949Seriola_dumerili
ENSSLDG00000020613polr2a9590.072ENSSARG00000005875-9990.892Sorex_araneus
ENSSLDG00000020613polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSSLDG00000020613polr2a8293.482ENSSSCG00000028278-8293.490Sus_scrofa
ENSSLDG00000020613polr2a9892.879ENSTRUG00000012320polr2a8192.879Takifugu_rubripes
ENSSLDG00000020613polr2a9495.800ENSTNIG00000010136polr2a10095.528Tetraodon_nigroviridis
ENSSLDG00000020613polr2a7694.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSSLDG00000020613polr2a8292.737ENSTTRG00000014273-8292.746Tursiops_truncatus
ENSSLDG00000020613polr2a9394.166ENSUAMG00000014866-10091.466Ursus_americanus
ENSSLDG00000020613polr2a7491.602ENSUMAG00000015732-8391.061Ursus_maritimus
ENSSLDG00000020613polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSSLDG00000020613polr2a8294.351ENSVVUG00000027878-8394.358Vulpes_vulpes
ENSSLDG00000020613polr2a8194.336ENSXETG00000012465polr2a8294.343Xenopus_tropicalis
ENSSLDG00000020613polr2a9697.635ENSXCOG00000001804polr2a10097.635Xiphophorus_couchianus
ENSSLDG00000020613polr2a10098.496ENSXMAG00000015687polr2a10098.496Xiphophorus_maculatus

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