EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000020705 (Gene tree)
Gene ID: -
Gene Symbol: SNRPA
Alias: Mud1|U1-A|U1A
Full Name: small nuclear ribonucleoprotein polypeptide A
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3418 bases
Position: chrPEQF01098738.1:280184-283601
Accession: 111654105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000026638	RRM_1	PF00076.22	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000027456	SNRPA-201	2527	XM_023404983	ENSSLDP00000026638	312 (aa)	XP_023260751	-

Gene Model

Click here to download ENSSLDG00000020705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020705	SNRPA	74	69.397	ENSG00000077312	SNRPA	94	86.585	Homo_sapiens
ENSSLDG00000020705	SNRPA	71	88.636	ENSAPOG00000016549	snrpa	80	85.217	Acanthochromis_polyacanthus
ENSSLDG00000020705	SNRPA	71	73.423	ENSAMEG00000012247	SNRPA	78	68.103	Ailuropoda_melanoleuca
ENSSLDG00000020705	SNRPA	71	87.727	ENSACIG00000014399	snrpa	79	84.348	Amphilophus_citrinellus
ENSSLDG00000020705	SNRPA	71	89.091	ENSAOCG00000005919	snrpa	80	85.652	Amphiprion_ocellaris
ENSSLDG00000020705	SNRPA	71	89.091	ENSAPEG00000024469	snrpa	80	85.652	Amphiprion_percula
ENSSLDG00000020705	SNRPA	58	66.304	ENSACAG00000013557	SNRPA	75	63.043	Anolis_carolinensis
ENSSLDG00000020705	SNRPA	74	59.227	ENSANAG00000026131	-	79	55.844	Aotus_nancymaae
ENSSLDG00000020705	SNRPA	71	60.633	ENSANAG00000034581	-	79	59.740	Aotus_nancymaae
ENSSLDG00000020705	SNRPA	71	88.182	ENSACLG00000016447	snrpa	80	84.783	Astatotilapia_calliptera
ENSSLDG00000020705	SNRPA	71	84.091	ENSAMXG00000032885	snrpa	80	80.870	Astyanax_mexicanus
ENSSLDG00000020705	SNRPA	74	70.690	ENSBTAG00000009077	SNRPA	80	68.103	Bos_taurus
ENSSLDG00000020705	SNRPA	74	68.103	ENSCJAG00000021962	-	80	68.103	Callithrix_jacchus
ENSSLDG00000020705	SNRPA	74	70.690	ENSCJAG00000014865	-	80	68.103	Callithrix_jacchus
ENSSLDG00000020705	SNRPA	74	70.690	ENSCAFG00020014898	SNRPA	84	86.585	Canis_lupus_dingo
ENSSLDG00000020705	SNRPA	74	70.690	ENSCHIG00000026827	SNRPA	80	68.103	Capra_hircus
ENSSLDG00000020705	SNRPA	74	69.828	ENSTSYG00000007632	SNRPA	80	67.241	Carlito_syrichta
ENSSLDG00000020705	SNRPA	63	72.362	ENSCAPG00000006014	SNRPA	77	66.507	Cavia_aperea
ENSSLDG00000020705	SNRPA	74	70.690	ENSCPOG00000010875	SNRPA	80	68.103	Cavia_porcellus
ENSSLDG00000020705	SNRPA	74	70.259	ENSCATG00000032716	SNRPA	85	86.585	Cercocebus_atys
ENSSLDG00000020705	SNRPA	71	73.423	ENSCLAG00000001744	SNRPA	80	68.103	Chinchilla_lanigera
ENSSLDG00000020705	SNRPA	74	69.828	ENSCSAG00000003646	SNRPA	80	67.241	Chlorocebus_sabaeus
ENSSLDG00000020705	SNRPA	74	71.861	ENSCPBG00000004282	SNRPA	80	70.130	Chrysemys_picta_bellii
ENSSLDG00000020705	SNRPA	74	69.828	ENSCANG00000038637	SNRPA	84	86.585	Colobus_angolensis_palliatus
ENSSLDG00000020705	SNRPA	71	72.851	ENSCGRG00001017593	Snrpa	80	67.532	Cricetulus_griseus_chok1gshd
ENSSLDG00000020705	SNRPA	74	69.264	ENSCGRG00000009543	-	80	66.667	Cricetulus_griseus_crigri
ENSSLDG00000020705	SNRPA	71	83.182	ENSCSEG00000016885	snrpa	80	75.652	Cynoglossus_semilaevis
ENSSLDG00000020705	SNRPA	71	81.818	ENSCVAG00000004050	snrpa	79	78.696	Cyprinodon_variegatus
ENSSLDG00000020705	SNRPA	71	81.818	ENSDARG00000018890	snrpa	100	88.000	Danio_rerio
ENSSLDG00000020705	SNRPA	62	78.974	ENSDNOG00000018717	-	68	75.897	Dasypus_novemcinctus
ENSSLDG00000020705	SNRPA	74	70.690	ENSDNOG00000047384	-	80	68.103	Dasypus_novemcinctus
ENSSLDG00000020705	SNRPA	74	70.085	ENSDORG00000006711	Snrpa	80	67.521	Dipodomys_ordii
ENSSLDG00000020705	SNRPA	71	70.270	ENSETEG00000019205	SNRPA	80	64.655	Echinops_telfairi
ENSSLDG00000020705	SNRPA	60	60.963	ENSEBUG00000010056	-	56	68.667	Eptatretus_burgeri
ENSSLDG00000020705	SNRPA	74	68.966	ENSEASG00005005292	SNRPA	78	66.379	Equus_asinus_asinus
ENSSLDG00000020705	SNRPA	74	70.690	ENSECAG00000013141	SNRPA	80	68.103	Equus_caballus
ENSSLDG00000020705	SNRPA	74	70.690	ENSFCAG00000016209	SNRPA	80	68.103	Felis_catus
ENSSLDG00000020705	SNRPA	56	64.000	ENSFALG00000000743	SNRPA	80	55.102	Ficedula_albicollis
ENSSLDG00000020705	SNRPA	71	73.423	ENSFDAG00000013590	SNRPA	80	68.103	Fukomys_damarensis
ENSSLDG00000020705	SNRPA	71	78.636	ENSFHEG00000006165	snrpa	79	70.563	Fundulus_heteroclitus
ENSSLDG00000020705	SNRPA	71	83.182	ENSGMOG00000010128	SNRPA	80	80.000	Gadus_morhua
ENSSLDG00000020705	SNRPA	50	54.717	ENSGALG00000026999	SNRPB2	63	57.143	Gallus_gallus
ENSSLDG00000020705	SNRPA	71	80.909	ENSGAFG00000012502	snrpa	79	78.696	Gambusia_affinis
ENSSLDG00000020705	SNRPA	71	83.636	ENSGACG00000009838	snrpa	79	80.435	Gasterosteus_aculeatus
ENSSLDG00000020705	SNRPA	74	71.429	ENSGAGG00000020140	SNRPA	69	69.264	Gopherus_agassizii
ENSSLDG00000020705	SNRPA	74	69.397	ENSGGOG00000001190	SNRPA	80	67.241	Gorilla_gorilla
ENSSLDG00000020705	SNRPA	69	42.727	ENSHBUG00000001962	snrpb2	56	64.706	Haplochromis_burtoni
ENSSLDG00000020705	SNRPA	71	88.636	ENSHBUG00000002084	snrpa	80	85.217	Haplochromis_burtoni
ENSSLDG00000020705	SNRPA	74	71.121	ENSHGLG00000006044	-	80	68.534	Heterocephalus_glaber_female
ENSSLDG00000020705	SNRPA	71	57.919	ENSHGLG00000000751	-	78	54.113	Heterocephalus_glaber_female
ENSSLDG00000020705	SNRPA	71	57.919	ENSHGLG00100006883	-	78	54.113	Heterocephalus_glaber_male
ENSSLDG00000020705	SNRPA	74	71.121	ENSHGLG00100016379	-	78	68.534	Heterocephalus_glaber_male
ENSSLDG00000020705	SNRPA	64	81.407	ENSHCOG00000007571	snrpa	79	72.609	Hippocampus_comes
ENSSLDG00000020705	SNRPA	71	82.273	ENSIPUG00000008841	snrpa	79	79.130	Ictalurus_punctatus
ENSSLDG00000020705	SNRPA	71	73.874	ENSSTOG00000021474	SNRPA	80	68.534	Ictidomys_tridecemlineatus
ENSSLDG00000020705	SNRPA	71	72.973	ENSJJAG00000019683	Snrpa	78	67.672	Jaculus_jaculus
ENSSLDG00000020705	SNRPA	71	83.182	ENSKMAG00000020852	snrpa	79	80.000	Kryptolebias_marmoratus
ENSSLDG00000020705	SNRPA	71	75.909	ENSLACG00000017723	snrpa	80	73.043	Latimeria_chalumnae
ENSSLDG00000020705	SNRPA	71	76.818	ENSLOCG00000014661	SNRPA	80	73.913	Lepisosteus_oculatus
ENSSLDG00000020705	SNRPA	51	57.233	ENSLOCG00000015992	snrpb2	60	62.044	Lepisosteus_oculatus
ENSSLDG00000020705	SNRPA	58	65.746	ENSLAFG00000026568	SNRPA	56	73.856	Loxodonta_africana
ENSSLDG00000020705	SNRPA	74	69.828	ENSMFAG00000041710	SNRPA	85	86.585	Macaca_fascicularis
ENSSLDG00000020705	SNRPA	74	69.828	ENSMMUG00000022024	SNRPA	86	86.585	Macaca_mulatta
ENSSLDG00000020705	SNRPA	71	72.523	ENSMNEG00000037687	SNRPA	78	67.241	Macaca_nemestrina
ENSSLDG00000020705	SNRPA	71	72.523	ENSMLEG00000039593	SNRPA	85	86.585	Mandrillus_leucophaeus
ENSSLDG00000020705	SNRPA	71	89.091	ENSMAMG00000011714	snrpa	79	85.652	Mastacembelus_armatus
ENSSLDG00000020705	SNRPA	50	54.717	ENSMGAG00000006135	SNRPB2	63	57.143	Meleagris_gallopavo
ENSSLDG00000020705	SNRPA	71	72.851	ENSMAUG00000008754	Snrpa	80	67.532	Mesocricetus_auratus
ENSSLDG00000020705	SNRPA	71	72.973	ENSMICG00000009766	SNRPA	78	67.672	Microcebus_murinus
ENSSLDG00000020705	SNRPA	71	72.851	ENSMOCG00000014192	Snrpa	80	67.532	Microtus_ochrogaster
ENSSLDG00000020705	SNRPA	71	86.818	ENSMMOG00000012532	snrpa	80	83.478	Mola_mola
ENSSLDG00000020705	SNRPA	71	73.756	ENSMODG00000007912	SNRPA	78	70.259	Monodelphis_domestica
ENSSLDG00000020705	SNRPA	50	53.205	ENSMALG00000007170	snrpb2	65	58.156	Monopterus_albus
ENSSLDG00000020705	SNRPA	71	85.909	ENSMALG00000012456	snrpa	79	82.609	Monopterus_albus
ENSSLDG00000020705	SNRPA	74	69.787	MGP_CAROLIEiJ_G0029402	Snrpa	93	67.234	Mus_caroli
ENSSLDG00000020705	SNRPA	74	69.697	ENSMUSG00000061479	Snrpa	91	67.100	Mus_musculus
ENSSLDG00000020705	SNRPA	74	70.130	MGP_PahariEiJ_G0012638	-	93	67.532	Mus_pahari
ENSSLDG00000020705	SNRPA	71	70.306	MGP_PahariEiJ_G0012639	-	80	65.272	Mus_pahari
ENSSLDG00000020705	SNRPA	74	62.500	MGP_SPRETEiJ_G0022019	-	78	55.128	Mus_spretus
ENSSLDG00000020705	SNRPA	74	69.697	MGP_SPRETEiJ_G0030500	-	91	67.100	Mus_spretus
ENSSLDG00000020705	SNRPA	74	69.828	ENSMPUG00000017681	SNRPA	78	67.241	Mustela_putorius_furo
ENSSLDG00000020705	SNRPA	71	73.874	ENSMLUG00000000219	SNRPA	78	68.534	Myotis_lucifugus
ENSSLDG00000020705	SNRPA	71	72.398	ENSNGAG00000021668	Snrpa	80	67.532	Nannospalax_galili
ENSSLDG00000020705	SNRPA	71	87.783	ENSNBRG00000004413	snrpa	80	85.648	Neolamprologus_brichardi
ENSSLDG00000020705	SNRPA	66	68.599	ENSNLEG00000031631	SNRPA	78	65.700	Nomascus_leucogenys
ENSSLDG00000020705	SNRPA	63	72.449	ENSMEUG00000002434	SNRPA	78	68.599	Notamacropus_eugenii
ENSSLDG00000020705	SNRPA	74	69.397	ENSOPRG00000002364	SNRPA	80	67.672	Ochotona_princeps
ENSSLDG00000020705	SNRPA	71	73.423	ENSODEG00000001819	-	80	68.103	Octodon_degus
ENSSLDG00000020705	SNRPA	74	68.103	ENSODEG00000000468	-	80	67.241	Octodon_degus
ENSSLDG00000020705	SNRPA	71	89.091	ENSONIG00000003761	snrpa	80	85.652	Oreochromis_niloticus
ENSSLDG00000020705	SNRPA	50	56.051	ENSOANG00000001237	SNRPB2	64	60.417	Ornithorhynchus_anatinus
ENSSLDG00000020705	SNRPA	68	61.033	ENSOCUG00000024618	SNRPA	57	74.172	Oryctolagus_cuniculus
ENSSLDG00000020705	SNRPA	71	78.636	ENSORLG00000006536	snrpa	79	69.456	Oryzias_latipes
ENSSLDG00000020705	SNRPA	71	78.636	ENSORLG00020003270	snrpa	79	69.456	Oryzias_latipes_hni
ENSSLDG00000020705	SNRPA	71	78.182	ENSORLG00015005730	snrpa	79	69.038	Oryzias_latipes_hsok
ENSSLDG00000020705	SNRPA	71	79.091	ENSOMEG00000013010	snrpa	79	77.826	Oryzias_melastigma
ENSSLDG00000020705	SNRPA	71	73.423	ENSOGAG00000002864	SNRPA	80	68.103	Otolemur_garnettii
ENSSLDG00000020705	SNRPA	74	70.690	ENSOARG00000006963	SNRPA	80	68.103	Ovis_aries
ENSSLDG00000020705	SNRPA	74	69.828	ENSPPAG00000033257	SNRPA	80	67.241	Pan_paniscus
ENSSLDG00000020705	SNRPA	74	70.690	ENSPPRG00000024126	SNRPA	80	68.103	Panthera_pardus
ENSSLDG00000020705	SNRPA	74	70.690	ENSPTIG00000015686	SNRPA	80	68.103	Panthera_tigris_altaica
ENSSLDG00000020705	SNRPA	74	69.828	ENSPTRG00000011007	SNRPA	80	67.241	Pan_troglodytes
ENSSLDG00000020705	SNRPA	74	69.828	ENSPANG00000023874	SNRPA	85	86.585	Papio_anubis
ENSSLDG00000020705	SNRPA	71	75.909	ENSPKIG00000011587	snrpa	79	75.217	Paramormyrops_kingsleyae
ENSSLDG00000020705	SNRPA	74	69.264	ENSPSIG00000015257	SNRPA	82	63.948	Pelodiscus_sinensis
ENSSLDG00000020705	SNRPA	71	72.851	ENSPEMG00000000486	Snrpa	80	67.532	Peromyscus_maniculatus_bairdii
ENSSLDG00000020705	SNRPA	71	73.756	ENSPCIG00000020946	SNRPA	80	70.259	Phascolarctos_cinereus
ENSSLDG00000020705	SNRPA	71	80.909	ENSPFOG00000010881	snrpa	79	78.696	Poecilia_formosa
ENSSLDG00000020705	SNRPA	71	81.364	ENSPLAG00000019608	snrpa	79	79.130	Poecilia_latipinna
ENSSLDG00000020705	SNRPA	71	80.000	ENSPREG00000001279	snrpa	79	77.826	Poecilia_reticulata
ENSSLDG00000020705	SNRPA	74	69.828	ENSPPYG00000010002	SNRPA	80	67.241	Pongo_abelii
ENSSLDG00000020705	SNRPA	71	72.973	ENSPCAG00000012325	SNRPA	80	67.672	Procavia_capensis
ENSSLDG00000020705	SNRPA	71	73.874	ENSPCOG00000025196	SNRPA	82	86.585	Propithecus_coquereli
ENSSLDG00000020705	SNRPA	71	73.423	ENSPVAG00000001494	SNRPA	80	68.534	Pteropus_vampyrus
ENSSLDG00000020705	SNRPA	71	88.636	ENSPNYG00000006184	snrpa	80	85.217	Pundamilia_nyererei
ENSSLDG00000020705	SNRPA	71	85.000	ENSPNAG00000028209	snrpa	80	81.739	Pygocentrus_nattereri
ENSSLDG00000020705	SNRPA	71	72.851	ENSRNOG00000001501	Snrpa	80	67.532	Rattus_norvegicus
ENSSLDG00000020705	SNRPA	74	68.831	ENSRBIG00000008335	SNRPA	84	86.585	Rhinopithecus_bieti
ENSSLDG00000020705	SNRPA	74	69.828	ENSRROG00000042727	SNRPA	84	86.585	Rhinopithecus_roxellana
ENSSLDG00000020705	SNRPA	74	70.690	ENSSBOG00000034722	SNRPA	80	68.103	Saimiri_boliviensis_boliviensis
ENSSLDG00000020705	SNRPA	58	69.780	ENSSHAG00000003706	SNRPA	59	80.645	Sarcophilus_harrisii
ENSSLDG00000020705	SNRPA	71	85.135	ENSSFOG00015006256	snrpa	80	81.897	Scleropages_formosus
ENSSLDG00000020705	SNRPA	58	77.473	ENSSMAG00000013304	snrpa	65	93.103	Scophthalmus_maximus
ENSSLDG00000020705	SNRPA	71	93.636	ENSSDUG00000018621	snrpa	80	90.000	Seriola_dumerili
ENSSLDG00000020705	SNRPA	54	80.588	ENSSPUG00000018311	SNRPA	69	80.588	Sphenodon_punctatus
ENSSLDG00000020705	SNRPA	71	89.091	ENSSPAG00000008745	snrpa	80	85.652	Stegastes_partitus
ENSSLDG00000020705	SNRPA	74	69.264	ENSSSCG00000002998	SNRPA	80	66.667	Sus_scrofa
ENSSLDG00000020705	SNRPA	50	54.717	ENSTGUG00000002415	-	63	57.143	Taeniopygia_guttata
ENSSLDG00000020705	SNRPA	71	81.364	ENSTRUG00000009703	snrpa	79	75.325	Takifugu_rubripes
ENSSLDG00000020705	SNRPA	71	80.909	ENSTNIG00000007732	snrpa	79	74.892	Tetraodon_nigroviridis
ENSSLDG00000020705	SNRPA	71	65.333	ENSTBEG00000012717	SNRPA	57	78.710	Tupaia_belangeri
ENSSLDG00000020705	SNRPA	74	70.690	ENSUMAG00000019791	SNRPA	80	68.103	Ursus_maritimus
ENSSLDG00000020705	SNRPA	74	70.690	ENSVVUG00000005647	SNRPA	84	86.585	Vulpes_vulpes
ENSSLDG00000020705	SNRPA	74	57.203	ENSXETG00000002585	snrpa	80	56.780	Xenopus_tropicalis
ENSSLDG00000020705	SNRPA	71	81.364	ENSXMAG00000018580	snrpa	79	79.130	Xiphophorus_maculatus