EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000020784 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Minus strand
Length
36877 bases
Position
chrPEQF01099046.1:240975-277851
Accession
111662680
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000026752tRNA_anti-codonPF01336.251.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000027571RPA1 (1 of many)-2012937XM_023416619ENSSLDP00000026752685 (aa)XP_023272387UPI000C6FB162
Gene Model
Click here to download ENSSLDG00000020784's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020784's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000020784RPA19171.233ENSSLDG00000011806rpa19271.528
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000020784RPA18170.588ENSAPOG00000011658rpa19371.296Acanthochromis_polyacanthus
ENSSLDG00000020784RPA110080.318ENSAPOG00000019409RPA110080.029Acanthochromis_polyacanthus
ENSSLDG00000020784RPA18364.773ENSAMEG00000007706RPA18565.509Ailuropoda_melanoleuca
ENSSLDG00000020784RPA17960.633ENSACIG00000007277rpa19260.780Amphilophus_citrinellus
ENSSLDG00000020784RPA19675.266ENSACIG00000012881RPA19974.659Amphilophus_citrinellus
ENSSLDG00000020784RPA110077.956ENSAOCG00000009003RPA110077.810Amphiprion_ocellaris
ENSSLDG00000020784RPA18471.396ENSAOCG00000023376rpa19371.694Amphiprion_ocellaris
ENSSLDG00000020784RPA19066.393ENSAPEG00000008634rpa19371.694Amphiprion_percula
ENSSLDG00000020784RPA110079.708ENSAPEG00000019132RPA110079.270Amphiprion_percula
ENSSLDG00000020784RPA110080.292ENSATEG00000006443RPA110080.292Anabas_testudineus
ENSSLDG00000020784RPA17770.709ENSATEG00000022024rpa19370.833Anabas_testudineus
ENSSLDG00000020784RPA18254.034ENSAPLG00000012442RPA19946.133Anas_platyrhynchos
ENSSLDG00000020784RPA18561.312ENSACAG00000014490RPA19261.609Anolis_carolinensis
ENSSLDG00000020784RPA19753.904ENSANAG00000023456RPA19465.438Aotus_nancymaae
ENSSLDG00000020784RPA19977.924ENSACLG00000005223RPA19977.924Astatotilapia_calliptera
ENSSLDG00000020784RPA17571.918ENSACLG00000006640rpa19272.222Astatotilapia_calliptera
ENSSLDG00000020784RPA19270.337ENSAMXG00000008418rpa19771.528Astyanax_mexicanus
ENSSLDG00000020784RPA18064.384ENSBTAG00000009711RPA18964.733Bos_taurus
ENSSLDG00000020784RPA18164.932ENSCJAG00000001848RPA19951.453Callithrix_jacchus
ENSSLDG00000020784RPA18664.009ENSCAFG00000019249RPA18964.501Canis_familiaris
ENSSLDG00000020784RPA18664.009ENSCAFG00020009847RPA18964.501Canis_lupus_dingo
ENSSLDG00000020784RPA18064.155ENSCHIG00000026308RPA18964.501Capra_hircus
ENSSLDG00000020784RPA18564.692ENSTSYG00000003482-8965.429Carlito_syrichta
ENSSLDG00000020784RPA19951.825ENSCPOG00000000035RPA19949.343Cavia_porcellus
ENSSLDG00000020784RPA18152.489ENSCCAG00000010981RPA19943.459Cebus_capucinus
ENSSLDG00000020784RPA19953.139ENSCLAG00000005185-9952.409Chinchilla_lanigera
ENSSLDG00000020784RPA19949.561ENSCLAG00000015045-9948.830Chinchilla_lanigera
ENSSLDG00000020784RPA18352.036ENSCSAG00000013833RPA19942.878Chlorocebus_sabaeus
ENSSLDG00000020784RPA16365.668ENSCHOG00000009454-9865.893Choloepus_hoffmanni
ENSSLDG00000020784RPA18065.525ENSCHOG00000013540-8966.125Choloepus_hoffmanni
ENSSLDG00000020784RPA18466.895ENSCPBG00000020377RPA19953.281Chrysemys_picta_bellii
ENSSLDG00000020784RPA18149.213ENSCING00000023482-9050.000Ciona_intestinalis
ENSSLDG00000020784RPA18464.932ENSCANG00000030911RPA19365.438Colobus_angolensis_palliatus
ENSSLDG00000020784RPA19949.046ENSCGRG00001008197Rpa19948.752Cricetulus_griseus_chok1gshd
ENSSLDG00000020784RPA16364.450ENSCGRG00000000582Rpa18464.733Cricetulus_griseus_crigri
ENSSLDG00000020784RPA110065.693ENSCSEG00000012726RPA19965.835Cynoglossus_semilaevis
ENSSLDG00000020784RPA18568.552ENSCSEG00000013066rpa19269.213Cynoglossus_semilaevis
ENSSLDG00000020784RPA19673.828ENSCVAG00000013446-9673.676Cyprinodon_variegatus
ENSSLDG00000020784RPA18270.776ENSCVAG00000019431rpa19371.132Cyprinodon_variegatus
ENSSLDG00000020784RPA19469.063ENSDARG00000003938rpa19171.759Danio_rerio
ENSSLDG00000020784RPA18365.668ENSDNOG00000017218RPA18865.893Dasypus_novemcinctus
ENSSLDG00000020784RPA19262.055ENSDORG00000006199Rpa19951.825Dipodomys_ordii
ENSSLDG00000020784RPA18843.487FBgn0010173RpA-709246.172Drosophila_melanogaster
ENSSLDG00000020784RPA17565.263ENSETEG00000017608RPA17365.263Echinops_telfairi
ENSSLDG00000020784RPA19161.538ENSEASG00005009372RPA19865.429Equus_asinus_asinus
ENSSLDG00000020784RPA18465.068ENSECAG00000023886RPA18965.429Equus_caballus
ENSSLDG00000020784RPA16064.423ENSEEUG00000002186-6864.423Erinaceus_europaeus
ENSSLDG00000020784RPA110053.790ENSELUG00000021071rpa19953.353Esox_lucius
ENSSLDG00000020784RPA17273.861ENSELUG00000006136RPA19273.861Esox_lucius
ENSSLDG00000020784RPA19949.486ENSFCAG00000006306RPA19949.192Felis_catus
ENSSLDG00000020784RPA19951.749ENSFALG00000006575RPA19951.020Ficedula_albicollis
ENSSLDG00000020784RPA19952.993ENSFDAG00000007720RPA19952.701Fukomys_damarensis
ENSSLDG00000020784RPA19952.933ENSFHEG00000003580rpa19952.933Fundulus_heteroclitus
ENSSLDG00000020784RPA19066.457ENSGMOG00000010382rpa19966.109Gadus_morhua
ENSSLDG00000020784RPA18763.755ENSGALG00000003072RPA19948.977Gallus_gallus
ENSSLDG00000020784RPA19363.400ENSGAFG00000012916rpa19770.139Gambusia_affinis
ENSSLDG00000020784RPA19974.854ENSGAFG00000020953RPA19974.415Gambusia_affinis
ENSSLDG00000020784RPA18467.679ENSGACG00000010856rpa19767.679Gasterosteus_aculeatus
ENSSLDG00000020784RPA18466.895ENSGAGG00000013611RPA19952.339Gopherus_agassizii
ENSSLDG00000020784RPA18464.920ENSGGOG00000014186RPA19465.429Gorilla_gorilla
ENSSLDG00000020784RPA17877.419ENSHBUG00000009348RPA19277.419Haplochromis_burtoni
ENSSLDG00000020784RPA19171.689ENSHBUG00000017773rpa19271.991Haplochromis_burtoni
ENSSLDG00000020784RPA18465.826ENSHGLG00000008846RPA19952.263Heterocephalus_glaber_female
ENSSLDG00000020784RPA18465.826ENSHGLG00100017755-9952.263Heterocephalus_glaber_male
ENSSLDG00000020784RPA19949.197ENSHGLG00100000799-9949.051Heterocephalus_glaber_male
ENSSLDG00000020784RPA18156.092ENSHGLG00100002005-8956.279Heterocephalus_glaber_male
ENSSLDG00000020784RPA19163.657ENSHCOG00000001401rpa19952.786Hippocampus_comes
ENSSLDG00000020784RPA18754.989ENSHCOG00000000351RPA19557.547Hippocampus_comes
ENSSLDG00000020784RPA19766.597ENSIPUG00000004400rpa19966.597Ictalurus_punctatus
ENSSLDG00000020784RPA19252.119ENSSTOG00000022475RPA19451.491Ictidomys_tridecemlineatus
ENSSLDG00000020784RPA18164.450ENSJJAG00000000876Rpa18864.884Jaculus_jaculus
ENSSLDG00000020784RPA19979.032ENSKMAG00000000234RPA19978.629Kryptolebias_marmoratus
ENSSLDG00000020784RPA18069.635ENSKMAG00000005605rpa19070.208Kryptolebias_marmoratus
ENSSLDG00000020784RPA18867.904ENSLBEG00000021604rpa19469.515Labrus_bergylta
ENSSLDG00000020784RPA19975.770ENSLBEG00000002281RPA19975.070Labrus_bergylta
ENSSLDG00000020784RPA16758.621ENSLACG00000007210RPA18860.690Latimeria_chalumnae
ENSSLDG00000020784RPA19863.434ENSLOCG00000006397rpa19269.746Lepisosteus_oculatus
ENSSLDG00000020784RPA19948.755ENSLAFG00000015354RPA19951.684Loxodonta_africana
ENSSLDG00000020784RPA16565.116ENSMFAG00000036138-9847.183Macaca_fascicularis
ENSSLDG00000020784RPA18264.480ENSMMUG00000011604-9948.889Macaca_mulatta
ENSSLDG00000020784RPA18560.722ENSMMUG00000002442-9161.149Macaca_mulatta
ENSSLDG00000020784RPA19260.135ENSMNEG00000029837-9960.550Macaca_nemestrina
ENSSLDG00000020784RPA17963.801ENSMNEG00000031632-8964.286Macaca_nemestrina
ENSSLDG00000020784RPA18061.765ENSMLEG00000038768-8555.894Mandrillus_leucophaeus
ENSSLDG00000020784RPA19981.725ENSMAMG00000020097RPA19981.579Mastacembelus_armatus
ENSSLDG00000020784RPA18569.438ENSMAMG00000017993rpa19669.907Mastacembelus_armatus
ENSSLDG00000020784RPA19171.689ENSMZEG00005007551rpa19271.991Maylandia_zebra
ENSSLDG00000020784RPA19977.924ENSMZEG00005024731RPA19977.924Maylandia_zebra
ENSSLDG00000020784RPA19949.188ENSMGAG00000005315RPA19064.965Meleagris_gallopavo
ENSSLDG00000020784RPA18864.679ENSMAUG00000010474Rpa19849.170Mesocricetus_auratus
ENSSLDG00000020784RPA18465.429ENSMICG00000012867RPA19949.927Microcebus_murinus
ENSSLDG00000020784RPA19163.532ENSMOCG00000013019Rpa19063.805Microtus_ochrogaster
ENSSLDG00000020784RPA19969.778ENSMMOG00000010868RPA19685.612Mola_mola
ENSSLDG00000020784RPA19952.570ENSMMOG00000014292rpa19170.370Mola_mola
ENSSLDG00000020784RPA19065.101ENSMODG00000010549RPA18966.512Monodelphis_domestica
ENSSLDG00000020784RPA110075.000ENSMALG00000001208RPA110075.000Monopterus_albus
ENSSLDG00000020784RPA18371.264ENSMALG00000011453rpa19270.833Monopterus_albus
ENSSLDG00000020784RPA18464.450MGP_CAROLIEiJ_G0016734Rpa19064.733Mus_caroli
ENSSLDG00000020784RPA18464.679ENSMUSG00000000751Rpa19948.902Mus_musculus
ENSSLDG00000020784RPA19950.073MGP_PahariEiJ_G0017871Rpa19949.488Mus_pahari
ENSSLDG00000020784RPA18464.908MGP_SPRETEiJ_G0017577Rpa19951.684Mus_spretus
ENSSLDG00000020784RPA18864.384ENSMPUG00000013119RPA18964.733Mustela_putorius_furo
ENSSLDG00000020784RPA18464.612ENSMLUG00000006113RPA18964.733Myotis_lucifugus
ENSSLDG00000020784RPA19651.824ENSNGAG00000004522Rpa19352.280Nannospalax_galili
ENSSLDG00000020784RPA17671.461ENSNBRG00000020595rpa19171.759Neolamprologus_brichardi
ENSSLDG00000020784RPA19968.879ENSNBRG00000009672RPA19769.322Neolamprologus_brichardi
ENSSLDG00000020784RPA18265.148ENSNLEG00000017149RPA19065.661Nomascus_leucogenys
ENSSLDG00000020784RPA18863.158ENSMEUG00000006714RPA19743.137Notamacropus_eugenii
ENSSLDG00000020784RPA19652.504ENSODEG00000009038RPA19652.504Octodon_degus
ENSSLDG00000020784RPA18271.461ENSONIG00000013135rpa19071.759Oreochromis_niloticus
ENSSLDG00000020784RPA19851.560ENSOANG00000010880RPA18965.046Ornithorhynchus_anatinus
ENSSLDG00000020784RPA18764.612ENSOCUG00000001504RPA19948.153Oryctolagus_cuniculus
ENSSLDG00000020784RPA18171.625ENSORLG00000004856rpa19271.694Oryzias_latipes
ENSSLDG00000020784RPA19972.449ENSORLG00000003368RPA19972.174Oryzias_latipes
ENSSLDG00000020784RPA18171.854ENSORLG00020008980rpa19271.926Oryzias_latipes_hni
ENSSLDG00000020784RPA19972.543ENSORLG00020015284RPA19972.334Oryzias_latipes_hni
ENSSLDG00000020784RPA19971.491ENSORLG00015020383RPA19971.429Oryzias_latipes_hsok
ENSSLDG00000020784RPA16481.693ENSORLG00015005867-9880.089Oryzias_latipes_hsok
ENSSLDG00000020784RPA18171.854ENSORLG00015013982rpa19271.926Oryzias_latipes_hsok
ENSSLDG00000020784RPA18668.879ENSOMEG00000004704rpa19269.142Oryzias_melastigma
ENSSLDG00000020784RPA19967.894ENSOMEG00000011040RPA19868.134Oryzias_melastigma
ENSSLDG00000020784RPA18367.568ENSOGAG00000029379-8670.192Otolemur_garnettii
ENSSLDG00000020784RPA18864.840ENSOGAG00000005581-8965.429Otolemur_garnettii
ENSSLDG00000020784RPA18064.155ENSOARG00000014479RPA18964.501Ovis_aries
ENSSLDG00000020784RPA18265.148ENSPPAG00000039680RPA19065.661Pan_paniscus
ENSSLDG00000020784RPA19952.117ENSPPRG00000011807RPA18965.581Panthera_pardus
ENSSLDG00000020784RPA19952.276ENSPTIG00000007898RPA18865.581Panthera_tigris_altaica
ENSSLDG00000020784RPA18264.920ENSPTRG00000008539RPA19065.429Pan_troglodytes
ENSSLDG00000020784RPA18364.480ENSPANG00000024592RPA19950.872Papio_anubis
ENSSLDG00000020784RPA17673.710ENSPKIG00000008053rpa18673.815Paramormyrops_kingsleyae
ENSSLDG00000020784RPA18965.068ENSPSIG00000015617RPA18965.429Pelodiscus_sinensis
ENSSLDG00000020784RPA19479.303ENSPMGG00000000543RPA19978.431Periophthalmus_magnuspinnatus
ENSSLDG00000020784RPA18072.146ENSPMGG00000011589rpa19372.454Periophthalmus_magnuspinnatus
ENSSLDG00000020784RPA19064.450ENSPEMG00000021061Rpa18964.733Peromyscus_maniculatus_bairdii
ENSSLDG00000020784RPA18265.324ENSPCIG00000019049RPA18966.744Phascolarctos_cinereus
ENSSLDG00000020784RPA19363.200ENSPFOG00000003987rpa19963.200Poecilia_formosa
ENSSLDG00000020784RPA19363.400ENSPLAG00000004984rpa19963.400Poecilia_latipinna
ENSSLDG00000020784RPA19575.153ENSPLAG00000008844-9774.847Poecilia_latipinna
ENSSLDG00000020784RPA19575.153ENSPMEG00000003627-9775.000Poecilia_mexicana
ENSSLDG00000020784RPA19363.200ENSPMEG00000020602rpa19269.907Poecilia_mexicana
ENSSLDG00000020784RPA19976.901ENSPREG00000010119RPA110075.957Poecilia_reticulata
ENSSLDG00000020784RPA17763.366ENSPREG00000010174rpa18863.409Poecilia_reticulata
ENSSLDG00000020784RPA18564.920ENSPCOG00000001799RPA18965.197Propithecus_coquereli
ENSSLDG00000020784RPA19160.575ENSPVAG00000002149RPA19948.905Pteropus_vampyrus
ENSSLDG00000020784RPA19171.918ENSPNYG00000016316rpa19272.222Pundamilia_nyererei
ENSSLDG00000020784RPA19978.070ENSPNYG00000024165RPA19978.070Pundamilia_nyererei
ENSSLDG00000020784RPA19260.619ENSPNAG00000008599rpa19658.947Pygocentrus_nattereri
ENSSLDG00000020784RPA19064.679ENSRNOG00000003123Rpa18965.197Rattus_norvegicus
ENSSLDG00000020784RPA18564.480ENSRBIG00000036587RPA19948.983Rhinopithecus_bieti
ENSSLDG00000020784RPA18559.276ENSRROG00000043278RPA19059.677Rhinopithecus_roxellana
ENSSLDG00000020784RPA16635.065YAR007CRFA17036.009Saccharomyces_cerevisiae
ENSSLDG00000020784RPA17465.158ENSSBOG00000030233RPA19753.239Saimiri_boliviensis_boliviensis
ENSSLDG00000020784RPA18165.996ENSSHAG00000007969RPA19852.725Sarcophilus_harrisii
ENSSLDG00000020784RPA18771.491ENSSFOG00015005362rpa18673.210Scleropages_formosus
ENSSLDG00000020784RPA110078.248ENSSMAG00000019746RPA110077.372Scophthalmus_maximus
ENSSLDG00000020784RPA110097.664ENSSDUG00000016358RPA110097.664Seriola_dumerili
ENSSLDG00000020784RPA18471.918ENSSDUG00000011949rpa19271.991Seriola_dumerili
ENSSLDG00000020784RPA17766.667ENSSARG00000007506RPA17866.667Sorex_araneus
ENSSLDG00000020784RPA19058.384ENSSPUG00000007223RPA19950.224Sphenodon_punctatus
ENSSLDG00000020784RPA19971.154ENSSPAG00000011165RPA110069.343Stegastes_partitus
ENSSLDG00000020784RPA18570.787ENSSPAG00000009903rpa19271.065Stegastes_partitus
ENSSLDG00000020784RPA18265.982ENSSSCG00000017822RPA19366.357Sus_scrofa
ENSSLDG00000020784RPA19950.585ENSTGUG00000005775RPA19948.397Taeniopygia_guttata
ENSSLDG00000020784RPA18470.455ENSTRUG00000003616rpa19271.163Takifugu_rubripes
ENSSLDG00000020784RPA19970.233ENSTRUG00000000405RPA19970.248Takifugu_rubripes
ENSSLDG00000020784RPA19170.159ENSTNIG00000016199rpa19170.439Tetraodon_nigroviridis
ENSSLDG00000020784RPA16465.904ENSTBEG00000002709RPA17266.357Tupaia_belangeri
ENSSLDG00000020784RPA18064.465ENSTTRG00000001169RPA18865.197Tursiops_truncatus
ENSSLDG00000020784RPA17176.923ENSUAMG00000015676RPA19176.923Ursus_americanus
ENSSLDG00000020784RPA18264.465ENSUMAG00000009328RPA19465.197Ursus_maritimus
ENSSLDG00000020784RPA19059.504ENSVPAG00000009443RPA19849.926Vicugna_pacos
ENSSLDG00000020784RPA19949.339ENSVVUG00000021715RPA18964.733Vulpes_vulpes
ENSSLDG00000020784RPA18066.972ENSXETG00000013538rpa19960.630Xenopus_tropicalis
ENSSLDG00000020784RPA17870.297ENSXCOG00000010068rpa18870.426Xiphophorus_couchianus
ENSSLDG00000020784RPA19667.835ENSXCOG00000009899-9967.530Xiphophorus_couchianus
ENSSLDG00000020784RPA19973.625ENSXMAG00000010333RPA19973.484Xiphophorus_maculatus
ENSSLDG00000020784RPA19363.200ENSXMAG00000004102rpa19269.907Xiphophorus_maculatus

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