EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000020897 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 4888 bases
Position: chrPEQF01099475.1:2327209-2332096
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000026886	RVT_1	PF00078.27	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000027720	-	1143	-	ENSSLDP00000026886	380 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000020897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000020897	-	55	40.191	ENSSLDG00000011767	-	52	40.191
ENSSLDG00000020897	-	90	46.491	ENSSLDG00000003339	-	69	46.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020897	-	61	34.310	ENSAPOG00000014592	-	58	34.310	Acanthochromis_polyacanthus
ENSSLDG00000020897	-	64	33.198	ENSACIG00000009227	-	65	33.198	Amphilophus_citrinellus
ENSSLDG00000020897	-	69	40.152	ENSAOCG00000007213	-	68	40.152	Amphiprion_ocellaris
ENSSLDG00000020897	-	66	39.442	ENSAOCG00000018056	-	66	39.442	Amphiprion_ocellaris
ENSSLDG00000020897	-	62	40.756	ENSAPEG00000020818	-	60	40.756	Amphiprion_percula
ENSSLDG00000020897	-	54	42.056	ENSAPEG00000002124	-	50	42.056	Amphiprion_percula
ENSSLDG00000020897	-	62	40.506	ENSAPEG00000011105	-	58	40.506	Amphiprion_percula
ENSSLDG00000020897	-	66	41.036	ENSAPEG00000017986	-	68	41.036	Amphiprion_percula
ENSSLDG00000020897	-	58	41.256	ENSAPEG00000018159	-	58	41.256	Amphiprion_percula
ENSSLDG00000020897	-	62	41.525	ENSAPEG00000018088	-	61	41.525	Amphiprion_percula
ENSSLDG00000020897	-	68	40.613	ENSAPEG00000022045	-	72	40.613	Amphiprion_percula
ENSSLDG00000020897	-	61	40.598	ENSAPEG00000021165	-	62	40.598	Amphiprion_percula
ENSSLDG00000020897	-	59	40.444	ENSAPEG00000022903	-	57	40.444	Amphiprion_percula
ENSSLDG00000020897	-	62	40.756	ENSAPEG00000018062	-	60	40.756	Amphiprion_percula
ENSSLDG00000020897	-	67	39.689	ENSATEG00000020541	-	62	39.689	Anabas_testudineus
ENSSLDG00000020897	-	61	41.379	ENSATEG00000001648	-	55	41.379	Anabas_testudineus
ENSSLDG00000020897	-	61	41.810	ENSATEG00000004130	-	60	41.810	Anabas_testudineus
ENSSLDG00000020897	-	58	40.625	ENSATEG00000022553	-	63	40.625	Anabas_testudineus
ENSSLDG00000020897	-	61	35.021	ENSATEG00000022267	-	63	35.021	Anabas_testudineus
ENSSLDG00000020897	-	66	40.476	ENSATEG00000010702	-	63	40.476	Anabas_testudineus
ENSSLDG00000020897	-	64	41.057	ENSATEG00000002616	-	62	41.057	Anabas_testudineus
ENSSLDG00000020897	-	64	40.650	ENSATEG00000021223	-	59	40.650	Anabas_testudineus
ENSSLDG00000020897	-	68	33.712	ENSATEG00000012596	-	64	33.712	Anabas_testudineus
ENSSLDG00000020897	-	55	39.336	ENSACLG00000000602	-	73	39.336	Astatotilapia_calliptera
ENSSLDG00000020897	-	68	43.130	ENSAMXG00000039759	-	60	43.130	Astyanax_mexicanus
ENSSLDG00000020897	-	99	39.062	ENSAMXG00000035523	-	70	39.062	Astyanax_mexicanus
ENSSLDG00000020897	-	66	38.039	ENSBTAG00000050818	-	70	38.039	Bos_taurus
ENSSLDG00000020897	-	59	37.662	ENSCHIG00000023099	-	87	37.662	Capra_hircus
ENSSLDG00000020897	-	60	40.343	ENSCPBG00000000566	-	64	40.343	Chrysemys_picta_bellii
ENSSLDG00000020897	-	54	44.608	ENSCPBG00000001576	-	85	44.608	Chrysemys_picta_bellii
ENSSLDG00000020897	-	54	45.098	ENSCPBG00000003125	-	85	45.098	Chrysemys_picta_bellii
ENSSLDG00000020897	-	53	42.512	ENSCPBG00000003218	-	85	42.512	Chrysemys_picta_bellii
ENSSLDG00000020897	-	63	36.585	ENSCPBG00000001785	-	70	36.585	Chrysemys_picta_bellii
ENSSLDG00000020897	-	62	38.017	ENSCPBG00000007878	-	61	38.017	Chrysemys_picta_bellii
ENSSLDG00000020897	-	62	40.851	ENSEBUG00000000330	-	98	40.851	Eptatretus_burgeri
ENSSLDG00000020897	-	70	46.642	ENSELUG00000000455	-	86	46.642	Esox_lucius
ENSSLDG00000020897	-	54	41.589	ENSFALG00000000112	-	61	41.014	Ficedula_albicollis
ENSSLDG00000020897	-	71	34.767	ENSFDAG00000018675	-	65	34.767	Fukomys_damarensis
ENSSLDG00000020897	-	53	40.291	ENSGAGG00000007019	-	65	40.291	Gopherus_agassizii
ENSSLDG00000020897	-	67	36.122	ENSGAGG00000006697	-	63	36.122	Gopherus_agassizii
ENSSLDG00000020897	-	89	47.214	ENSHBUG00000019642	-	87	47.214	Haplochromis_burtoni
ENSSLDG00000020897	-	74	36.396	ENSIPUG00000004466	-	73	36.396	Ictalurus_punctatus
ENSSLDG00000020897	-	74	36.082	ENSIPUG00000008898	-	69	36.082	Ictalurus_punctatus
ENSSLDG00000020897	-	59	40.179	ENSLBEG00000021481	-	58	40.179	Labrus_bergylta
ENSSLDG00000020897	-	63	40.417	ENSLBEG00000011884	-	56	40.417	Labrus_bergylta
ENSSLDG00000020897	-	69	31.679	ENSLBEG00000014732	-	57	31.679	Labrus_bergylta
ENSSLDG00000020897	-	53	41.000	ENSLBEG00000016646	-	53	41.000	Labrus_bergylta
ENSSLDG00000020897	-	56	41.818	ENSMMUG00000046725	-	65	41.818	Macaca_mulatta
ENSSLDG00000020897	-	66	40.385	ENSMMUG00000048335	-	52	40.385	Macaca_mulatta
ENSSLDG00000020897	-	81	36.000	ENSMAMG00000013736	-	67	36.000	Mastacembelus_armatus
ENSSLDG00000020897	-	63	39.834	ENSMAMG00000007988	-	52	39.834	Mastacembelus_armatus
ENSSLDG00000020897	-	71	55.147	ENSMAMG00000009166	-	65	55.147	Mastacembelus_armatus
ENSSLDG00000020897	-	63	39.834	ENSMAMG00000005141	-	60	39.834	Mastacembelus_armatus
ENSSLDG00000020897	-	63	39.834	ENSMAMG00000017258	-	58	39.834	Mastacembelus_armatus
ENSSLDG00000020897	-	60	38.627	ENSMODG00000029191	-	85	38.627	Monodelphis_domestica
ENSSLDG00000020897	-	64	37.349	ENSMODG00000029251	-	76	38.153	Monodelphis_domestica
ENSSLDG00000020897	-	66	37.743	ENSMODG00000029572	-	52	38.521	Monodelphis_domestica
ENSSLDG00000020897	-	66	37.354	ENSMODG00000027715	-	69	38.132	Monodelphis_domestica
ENSSLDG00000020897	-	66	36.965	ENSMODG00000027965	-	59	37.743	Monodelphis_domestica
ENSSLDG00000020897	-	60	36.596	ENSMODG00000028620	-	74	37.447	Monodelphis_domestica
ENSSLDG00000020897	-	66	36.965	ENSMODG00000029165	-	75	37.743	Monodelphis_domestica
ENSSLDG00000020897	-	66	37.354	ENSMODG00000028946	-	68	38.132	Monodelphis_domestica
ENSSLDG00000020897	-	53	36.364	ENSMODG00000029114	-	73	37.321	Monodelphis_domestica
ENSSLDG00000020897	-	76	37.037	ENSMODG00000029150	-	75	37.037	Monodelphis_domestica
ENSSLDG00000020897	-	66	36.187	ENSMODG00000029538	-	66	36.965	Monodelphis_domestica
ENSSLDG00000020897	-	66	36.965	ENSMODG00000029539	-	74	37.743	Monodelphis_domestica
ENSSLDG00000020897	-	66	38.132	ENSMODG00000029588	-	64	38.132	Monodelphis_domestica
ENSSLDG00000020897	-	69	36.667	ENSMODG00000028332	-	56	36.667	Monodelphis_domestica
ENSSLDG00000020897	-	69	36.431	ENSMODG00000028171	-	61	37.175	Monodelphis_domestica
ENSSLDG00000020897	-	57	40.179	ENSMODG00000002894	-	70	40.179	Monodelphis_domestica
ENSSLDG00000020897	-	66	37.354	ENSMODG00000028146	-	51	38.132	Monodelphis_domestica
ENSSLDG00000020897	-	69	36.431	ENSMODG00000028270	-	70	37.175	Monodelphis_domestica
ENSSLDG00000020897	-	73	48.736	ENSMALG00000003136	-	82	48.736	Monopterus_albus
ENSSLDG00000020897	-	76	40.345	ENSMALG00000008335	-	90	40.345	Monopterus_albus
ENSSLDG00000020897	-	83	44.340	ENSMALG00000008425	-	97	44.340	Monopterus_albus
ENSSLDG00000020897	-	68	38.846	ENSORLG00000024655	-	63	38.846	Oryzias_latipes
ENSSLDG00000020897	-	64	40.408	ENSORLG00000026063	-	65	40.408	Oryzias_latipes
ENSSLDG00000020897	-	78	35.762	ENSORLG00020000097	-	77	35.762	Oryzias_latipes_hni
ENSSLDG00000020897	-	68	42.205	ENSOMEG00000012804	-	78	42.205	Oryzias_melastigma
ENSSLDG00000020897	-	96	38.522	ENSOMEG00000000207	-	59	38.522	Oryzias_melastigma
ENSSLDG00000020897	-	64	43.373	ENSOMEG00000000861	-	53	43.373	Oryzias_melastigma
ENSSLDG00000020897	-	62	37.860	ENSPTIG00000005297	-	82	37.860	Panthera_tigris_altaica
ENSSLDG00000020897	-	96	45.504	ENSPKIG00000002864	-	56	45.504	Paramormyrops_kingsleyae
ENSSLDG00000020897	-	97	42.703	ENSPKIG00000010196	-	65	42.935	Paramormyrops_kingsleyae
ENSSLDG00000020897	-	69	42.803	ENSPSIG00000000051	-	74	42.803	Pelodiscus_sinensis
ENSSLDG00000020897	-	71	38.745	ENSPMGG00000012505	-	68	38.745	Periophthalmus_magnuspinnatus
ENSSLDG00000020897	-	82	43.269	ENSPMGG00000024049	-	95	43.269	Periophthalmus_magnuspinnatus
ENSSLDG00000020897	-	79	36.877	ENSPNAG00000024551	-	61	36.877	Pygocentrus_nattereri
ENSSLDG00000020897	-	67	40.945	ENSPNAG00000003082	-	83	40.945	Pygocentrus_nattereri
ENSSLDG00000020897	-	64	40.574	ENSPNAG00000021668	-	58	40.574	Pygocentrus_nattereri
ENSSLDG00000020897	-	64	41.224	ENSPNAG00000001571	-	59	41.224	Pygocentrus_nattereri
ENSSLDG00000020897	-	61	41.810	ENSPNAG00000029154	-	79	41.810	Pygocentrus_nattereri
ENSSLDG00000020897	-	62	39.316	ENSPNAG00000024323	-	55	39.316	Pygocentrus_nattereri
ENSSLDG00000020897	-	54	44.390	ENSPNAG00000015817	-	57	44.390	Pygocentrus_nattereri
ENSSLDG00000020897	-	68	33.977	ENSSFOG00015015080	-	78	33.977	Scleropages_formosus
ENSSLDG00000020897	-	63	34.553	ENSSDUG00000010900	-	67	34.538	Seriola_dumerili
ENSSLDG00000020897	-	71	39.711	ENSTRUG00000021793	-	89	39.711	Takifugu_rubripes
ENSSLDG00000020897	-	65	43.548	ENSXCOG00000008944	-	56	43.548	Xiphophorus_couchianus
ENSSLDG00000020897	-	60	44.589	ENSXMAG00000026283	-	63	44.589	Xiphophorus_maculatus