EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000020918 (Gene tree)
Gene ID: -
Gene Symbol: RAB17
Alias: -
Full Name: ras-related protein Rab-17-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 5221 bases
Position: chrPEQF01098864.1:100451-105671
Accession: 111657159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000026902	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000027737	RAB17-201	2529	XM_023409215	ENSSLDP00000026902	227 (aa)	XP_023264983	UPI000C6F5ED9

Gene Model

Click here to download ENSSLDG00000020918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000020918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000020918	RAB17	57	33.588	ENSSLDG00000014812	rab34b	64	33.588
ENSSLDG00000020918	RAB17	70	44.242	ENSSLDG00000010880	rab25a	78	44.242
ENSSLDG00000020918	RAB17	75	38.953	ENSSLDG00000005718	-	79	38.953
ENSSLDG00000020918	RAB17	75	31.579	ENSSLDG00000018681	rheb	92	31.579
ENSSLDG00000020918	RAB17	72	33.735	ENSSLDG00000006360	RAB39B	78	33.735
ENSSLDG00000020918	RAB17	74	30.178	ENSSLDG00000008584	rab33ba	78	30.178
ENSSLDG00000020918	RAB17	80	30.319	ENSSLDG00000015143	dnajc27	69	30.319
ENSSLDG00000020918	RAB17	73	50.602	ENSSLDG00000017771	rab5c	75	50.602
ENSSLDG00000020918	RAB17	74	38.235	ENSSLDG00000022239	rab12	68	38.182
ENSSLDG00000020918	RAB17	51	30.894	ENSSLDG00000012798	-	63	30.894
ENSSLDG00000020918	RAB17	70	33.540	ENSSLDG00000003631	si:dkey-16l2.16	95	31.343
ENSSLDG00000020918	RAB17	86	37.745	ENSSLDG00000009438	rab11a	93	37.745
ENSSLDG00000020918	RAB17	74	42.012	ENSSLDG00000020676	rab11bb	77	42.012
ENSSLDG00000020918	RAB17	72	30.952	ENSSLDG00000009464	rab36	62	30.952
ENSSLDG00000020918	RAB17	71	34.969	ENSSLDG00000015823	-	81	34.969
ENSSLDG00000020918	RAB17	75	38.372	ENSSLDG00000010503	rab14	79	38.372
ENSSLDG00000020918	RAB17	73	50.000	ENSSLDG00000011069	rab5aa	76	50.000
ENSSLDG00000020918	RAB17	86	33.503	ENSSLDG00000018942	rab1ab	96	33.503
ENSSLDG00000020918	RAB17	86	31.188	ENSSLDG00000012391	RAB7A	95	31.188
ENSSLDG00000020918	RAB17	72	39.157	ENSSLDG00000015289	-	78	39.157
ENSSLDG00000020918	RAB17	81	30.481	ENSSLDG00000000287	rab23	94	31.156
ENSSLDG00000020918	RAB17	58	30.303	ENSSLDG00000022168	kras	75	32.168
ENSSLDG00000020918	RAB17	63	38.889	ENSSLDG00000009068	-	68	38.889
ENSSLDG00000020918	RAB17	74	42.012	ENSSLDG00000005221	rab11ba	77	42.012
ENSSLDG00000020918	RAB17	73	32.738	ENSSLDG00000020354	rab42a	77	32.738
ENSSLDG00000020918	RAB17	56	33.588	ENSSLDG00000004352	-	61	33.588
ENSSLDG00000020918	RAB17	89	35.122	ENSSLDG00000022282	rab41	93	35.122
ENSSLDG00000020918	RAB17	70	44.025	ENSSLDG00000009725	-	77	44.025
ENSSLDG00000020918	RAB17	75	39.306	ENSSLDG00000020438	rab22a	89	39.306
ENSSLDG00000020918	RAB17	78	41.111	ENSSLDG00000005275	-	82	41.111
ENSSLDG00000020918	RAB17	65	33.557	ENSSLDG00000013333	si:cabz01085950.1	74	33.557
ENSSLDG00000020918	RAB17	66	41.060	ENSSLDG00000006014	rab18b	73	41.060
ENSSLDG00000020918	RAB17	75	36.047	ENSSLDG00000018024	zgc:171927	80	36.047
ENSSLDG00000020918	RAB17	59	34.783	ENSSLDG00000009351	rab9b	67	34.783
ENSSLDG00000020918	RAB17	69	36.709	ENSSLDG00000022533	rab30	77	36.709
ENSSLDG00000020918	RAB17	73	34.337	ENSSLDG00000012251	rab1ba	82	34.337
ENSSLDG00000020918	RAB17	88	30.583	ENSSLDG00000024959	-	97	30.583
ENSSLDG00000020918	RAB17	74	40.828	ENSSLDG00000012091	rab25b	81	40.828
ENSSLDG00000020918	RAB17	65	32.468	ENSSLDG00000008070	-	64	32.468
ENSSLDG00000020918	RAB17	74	42.012	ENSSLDG00000012116	rab11al	78	42.012
ENSSLDG00000020918	RAB17	67	37.255	ENSSLDG00000021984	RAB15	71	37.255
ENSSLDG00000020918	RAB17	70	35.404	ENSSLDG00000023317	rab15	75	35.404
ENSSLDG00000020918	RAB17	50	33.884	ENSSLDG00000014472	-	85	35.659
ENSSLDG00000020918	RAB17	74	38.824	ENSSLDG00000022555	rab2a	77	38.788
ENSSLDG00000020918	RAB17	70	31.515	ENSSLDG00000019214	zgc:101559	71	31.515
ENSSLDG00000020918	RAB17	74	38.462	ENSSLDG00000012474	rab6bb	79	38.462
ENSSLDG00000020918	RAB17	84	35.079	ENSSLDG00000003264	rab6ba	88	35.079
ENSSLDG00000020918	RAB17	66	39.735	ENSSLDG00000006977	rab18a	74	39.735
ENSSLDG00000020918	RAB17	92	32.381	ENSSLDG00000011757	-	99	32.381
ENSSLDG00000020918	RAB17	72	33.333	ENSSLDG00000002646	si:dkey-34d22.5	76	33.333
ENSSLDG00000020918	RAB17	55	35.938	ENSSLDG00000011597	si:dkey-13a21.4	63	35.938

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000020918	RAB17	100	77.093	ENSACIG00000006949	RAB17	100	77.093	Amphilophus_citrinellus
ENSSLDG00000020918	RAB17	100	77.093	ENSAOCG00000009167	-	100	77.093	Amphiprion_ocellaris
ENSSLDG00000020918	RAB17	100	76.652	ENSAPEG00000002915	RAB17	100	76.652	Amphiprion_percula
ENSSLDG00000020918	RAB17	86	46.193	ENSACAG00000004554	RAB17	88	46.193	Anolis_carolinensis
ENSSLDG00000020918	RAB17	100	75.771	ENSACLG00000001218	RAB17	100	75.771	Astatotilapia_calliptera
ENSSLDG00000020918	RAB17	74	49.112	ENSFCAG00000012724	RAB17	79	49.112	Felis_catus
ENSSLDG00000020918	RAB17	74	49.701	ENSFALG00000012783	RAB17	78	49.701	Ficedula_albicollis
ENSSLDG00000020918	RAB17	70	52.500	ENSGALG00000003899	RAB17	75	52.500	Gallus_gallus
ENSSLDG00000020918	RAB17	100	75.771	ENSHBUG00000001462	RAB17	100	75.771	Haplochromis_burtoni
ENSSLDG00000020918	RAB17	92	71.698	ENSLBEG00000027691	RAB17	92	71.698	Labrus_bergylta
ENSSLDG00000020918	RAB17	100	75.771	ENSMZEG00005013677	RAB17	100	75.771	Maylandia_zebra
ENSSLDG00000020918	RAB17	70	53.125	ENSMGAG00000003135	RAB17	74	53.125	Meleagris_gallopavo
ENSSLDG00000020918	RAB17	73	54.545	ENSMOCG00000006448	Rab17	77	54.545	Microtus_ochrogaster
ENSSLDG00000020918	RAB17	100	81.057	ENSMMOG00000019258	RAB17	100	81.057	Mola_mola
ENSSLDG00000020918	RAB17	86	47.179	ENSMODG00000008949	RAB17	90	47.179	Monodelphis_domestica
ENSSLDG00000020918	RAB17	95	63.426	ENSMALG00000007905	RAB17	89	63.426	Monopterus_albus
ENSSLDG00000020918	RAB17	91	75.243	ENSNBRG00000017793	RAB17	92	75.243	Neolamprologus_brichardi
ENSSLDG00000020918	RAB17	69	50.641	ENSMEUG00000005002	RAB17	89	50.641	Notamacropus_eugenii
ENSSLDG00000020918	RAB17	100	77.093	ENSONIG00000016776	RAB17	100	77.093	Oreochromis_niloticus
ENSSLDG00000020918	RAB17	71	49.383	ENSPPRG00000003974	RAB17	76	49.383	Panthera_pardus
ENSSLDG00000020918	RAB17	71	48.148	ENSPTIG00000014452	RAB17	76	48.148	Panthera_tigris_altaica
ENSSLDG00000020918	RAB17	69	50.318	ENSPSIG00000016995	RAB17	66	50.318	Pelodiscus_sinensis
ENSSLDG00000020918	RAB17	80	47.253	ENSPCIG00000021558	-	62	46.154	Phascolarctos_cinereus
ENSSLDG00000020918	RAB17	100	75.771	ENSPNYG00000011135	RAB17	100	75.771	Pundamilia_nyererei
ENSSLDG00000020918	RAB17	89	43.564	ENSSHAG00000009306	RAB17	93	43.564	Sarcophilus_harrisii
ENSSLDG00000020918	RAB17	100	96.916	ENSSDUG00000006618	RAB17	100	96.916	Seriola_dumerili
ENSSLDG00000020918	RAB17	57	54.615	ENSSPUG00000015409	RAB17	60	54.615	Sphenodon_punctatus
ENSSLDG00000020918	RAB17	100	76.211	ENSSPAG00000022624	-	100	76.211	Stegastes_partitus
ENSSLDG00000020918	RAB17	74	50.898	ENSTGUG00000003786	RAB17	79	50.898	Taeniopygia_guttata