EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000021064 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 11817 bases
Position: chrPEQF01099274.1:3001527-3013343
Accession: 111669536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000027115	KH_1	PF00013.29	3.6e-54	1	3
ENSSLDP00000027115	KH_1	PF00013.29	3.6e-54	2	3
ENSSLDP00000027115	KH_1	PF00013.29	3.6e-54	3	3
ENSSLDP00000027136	KH_1	PF00013.29	3.6e-54	1	3
ENSSLDP00000027136	KH_1	PF00013.29	3.6e-54	2	3
ENSSLDP00000027136	KH_1	PF00013.29	3.6e-54	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000027950	-	2949	XM_023425887	ENSSLDP00000027115	434 (aa)	XP_023281655	UPI000C6F78D1
ENSSLDT00000027971	-	2908	XM_023425886	ENSSLDP00000027136	434 (aa)	XP_023281654	UPI000C6F78D1

Gene Model

Click here to download ENSSLDG00000021064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000021064	zgc:110045	58	43.243	ENSSLDG00000005683	hnrpkl	60	43.243
ENSSLDG00000021064	zgc:110045	71	72.964	ENSSLDG00000002018	PCBP2	95	72.964
ENSSLDG00000021064	zgc:110045	54	36.000	ENSSLDG00000025625	KHSRP	63	36.000
ENSSLDG00000021064	zgc:110045	63	32.215	ENSSLDG00000022863	fubp1	67	36.250
ENSSLDG00000021064	zgc:110045	70	30.409	ENSSLDG00000011912	igf2bp1	63	30.409
ENSSLDG00000021064	zgc:110045	90	42.188	ENSSLDG00000006713	nova1	62	42.188
ENSSLDG00000021064	zgc:110045	74	32.911	ENSSLDG00000025576	igf2bp3	65	32.911
ENSSLDG00000021064	zgc:110045	75	72.699	ENSSLDG00000020161	-	98	72.699
ENSSLDG00000021064	zgc:110045	99	52.632	ENSSLDG00000007851	-	99	52.183
ENSSLDG00000021064	zgc:110045	68	35.616	ENSSLDG00000009455	FUBP3	70	35.616
ENSSLDG00000021064	zgc:110045	56	42.667	ENSSLDG00000002069	hnrnpk	56	42.667
ENSSLDG00000021064	zgc:110045	71	68.085	ENSSLDG00000008518	pcbp3	97	68.085
ENSSLDG00000021064	zgc:110045	70	35.252	ENSSLDG00000007046	igf2bp2b	61	35.252
ENSSLDG00000021064	zgc:110045	71	70.064	ENSSLDG00000008839	pcbp2	95	70.064

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021064	zgc:110045	72	76.997	ENSG00000183570	PCBP3	97	69.429	Homo_sapiens
ENSSLDG00000021064	zgc:110045	73	99.051	ENSAPOG00000023735	zgc:110045	97	99.051	Acanthochromis_polyacanthus
ENSSLDG00000021064	zgc:110045	73	93.548	ENSACIG00000002577	zgc:110045	99	93.548	Amphilophus_citrinellus
ENSSLDG00000021064	zgc:110045	100	97.926	ENSAPEG00000000729	zgc:110045	100	97.926	Amphiprion_percula
ENSSLDG00000021064	zgc:110045	97	92.174	ENSATEG00000011191	zgc:110045	100	92.174	Anabas_testudineus
ENSSLDG00000021064	zgc:110045	100	97.235	ENSACLG00000019285	zgc:110045	100	97.235	Astatotilapia_calliptera
ENSSLDG00000021064	zgc:110045	72	76.997	ENSBTAG00000030775	PCBP3	97	68.857	Bos_taurus
ENSSLDG00000021064	zgc:110045	72	72.590	ENSCAFG00000011907	PCBP3	88	72.590	Canis_familiaris
ENSSLDG00000021064	zgc:110045	72	69.970	ENSCHIG00000015841	PCBP3	87	69.970	Capra_hircus
ENSSLDG00000021064	zgc:110045	88	67.078	ENSTSYG00000005254	PCBP3	96	67.078	Carlito_syrichta
ENSSLDG00000021064	zgc:110045	72	55.927	ENSCAPG00000006767	PCBP3	81	55.927	Cavia_aperea
ENSSLDG00000021064	zgc:110045	72	72.372	ENSCPOG00000003648	PCBP3	89	72.372	Cavia_porcellus
ENSSLDG00000021064	zgc:110045	72	76.677	ENSCCAG00000024561	PCBP3	99	66.087	Cebus_capucinus
ENSSLDG00000021064	zgc:110045	72	76.997	ENSCATG00000038419	PCBP3	88	76.997	Cercocebus_atys
ENSSLDG00000021064	zgc:110045	72	72.372	ENSCLAG00000006667	PCBP3	88	72.372	Chinchilla_lanigera
ENSSLDG00000021064	zgc:110045	72	76.997	ENSCANG00000026757	PCBP3	88	76.997	Colobus_angolensis_palliatus
ENSSLDG00000021064	zgc:110045	72	72.372	ENSCGRG00001006836	Pcbp3	88	72.372	Cricetulus_griseus_chok1gshd
ENSSLDG00000021064	zgc:110045	72	72.372	ENSCGRG00000001837	Pcbp3	88	72.372	Cricetulus_griseus_crigri
ENSSLDG00000021064	zgc:110045	100	94.240	ENSCSEG00000010020	zgc:110045	100	94.240	Cynoglossus_semilaevis
ENSSLDG00000021064	zgc:110045	73	90.431	ENSCVAG00000004726	zgc:110045	93	90.431	Cyprinodon_variegatus
ENSSLDG00000021064	zgc:110045	50	79.724	ENSDARG00000057141	zgc:110045	97	79.724	Danio_rerio
ENSSLDG00000021064	zgc:110045	72	72.372	ENSDNOG00000049518	PCBP3	89	72.372	Dasypus_novemcinctus
ENSSLDG00000021064	zgc:110045	81	69.130	ENSDORG00000003640	Pcbp3	93	69.130	Dipodomys_ordii
ENSSLDG00000021064	zgc:110045	54	67.373	ENSEBUG00000009697	zgc:110045	99	67.606	Eptatretus_burgeri
ENSSLDG00000021064	zgc:110045	72	76.677	ENSEASG00005007068	PCBP3	88	76.677	Equus_asinus_asinus
ENSSLDG00000021064	zgc:110045	72	76.677	ENSECAG00000012413	PCBP3	88	76.677	Equus_caballus
ENSSLDG00000021064	zgc:110045	100	85.584	ENSELUG00000019784	zgc:110045	100	85.584	Esox_lucius
ENSSLDG00000021064	zgc:110045	72	76.677	ENSFCAG00000014812	PCBP3	88	76.677	Felis_catus
ENSSLDG00000021064	zgc:110045	72	76.677	ENSFDAG00000009117	PCBP3	88	76.677	Fukomys_damarensis
ENSSLDG00000021064	zgc:110045	73	93.035	ENSFHEG00000018838	-	92	93.035	Fundulus_heteroclitus
ENSSLDG00000021064	zgc:110045	70	92.182	ENSGMOG00000005953	zgc:110045	93	92.182	Gadus_morhua
ENSSLDG00000021064	zgc:110045	73	96.330	ENSGAFG00000017864	zgc:110045	96	96.330	Gambusia_affinis
ENSSLDG00000021064	zgc:110045	59	86.224	ENSGAFG00000017860	-	100	86.224	Gambusia_affinis
ENSSLDG00000021064	zgc:110045	72	96.497	ENSGACG00000003044	zgc:110045	97	96.497	Gasterosteus_aculeatus
ENSSLDG00000021064	zgc:110045	72	76.997	ENSGGOG00000003683	PCBP3	88	76.997	Gorilla_gorilla
ENSSLDG00000021064	zgc:110045	73	98.734	ENSHBUG00000012495	zgc:110045	97	98.734	Haplochromis_burtoni
ENSSLDG00000021064	zgc:110045	72	72.372	ENSHGLG00000018620	PCBP3	89	72.372	Heterocephalus_glaber_female
ENSSLDG00000021064	zgc:110045	72	72.372	ENSHGLG00100013590	PCBP3	89	72.372	Heterocephalus_glaber_male
ENSSLDG00000021064	zgc:110045	73	77.713	ENSHCOG00000000818	zgc:110045	99	90.826	Hippocampus_comes
ENSSLDG00000021064	zgc:110045	59	66.540	ENSIPUG00000003932	zgc:110045	97	66.540	Ictalurus_punctatus
ENSSLDG00000021064	zgc:110045	72	72.372	ENSSTOG00000007178	PCBP3	88	72.372	Ictidomys_tridecemlineatus
ENSSLDG00000021064	zgc:110045	72	72.673	ENSJJAG00000021192	Pcbp3	88	72.673	Jaculus_jaculus
ENSSLDG00000021064	zgc:110045	96	81.739	ENSKMAG00000016179	-	95	96.410	Kryptolebias_marmoratus
ENSSLDG00000021064	zgc:110045	73	88.889	ENSLBEG00000023074	zgc:110045	97	88.889	Labrus_bergylta
ENSSLDG00000021064	zgc:110045	69	74.786	ENSLAFG00000020835	PCBP3	96	74.786	Loxodonta_africana
ENSSLDG00000021064	zgc:110045	72	76.997	ENSMFAG00000034574	PCBP3	88	76.997	Macaca_fascicularis
ENSSLDG00000021064	zgc:110045	72	76.997	ENSMMUG00000003825	PCBP3	99	71.207	Macaca_mulatta
ENSSLDG00000021064	zgc:110045	72	76.997	ENSMNEG00000035551	PCBP3	97	76.997	Macaca_nemestrina
ENSSLDG00000021064	zgc:110045	72	76.997	ENSMLEG00000038785	PCBP3	97	69.255	Mandrillus_leucophaeus
ENSSLDG00000021064	zgc:110045	72	97.452	ENSMAMG00000014389	zgc:110045	99	97.452	Mastacembelus_armatus
ENSSLDG00000021064	zgc:110045	100	97.235	ENSMZEG00005011785	zgc:110045	100	97.235	Maylandia_zebra
ENSSLDG00000021064	zgc:110045	71	72.948	ENSMAUG00000007036	Pcbp3	87	72.948	Mesocricetus_auratus
ENSSLDG00000021064	zgc:110045	72	76.677	ENSMICG00000012679	PCBP3	88	76.677	Microcebus_murinus
ENSSLDG00000021064	zgc:110045	72	72.372	ENSMOCG00000016127	Pcbp3	88	72.372	Microtus_ochrogaster
ENSSLDG00000021064	zgc:110045	59	93.194	ENSMMOG00000008398	-	100	93.194	Mola_mola
ENSSLDG00000021064	zgc:110045	72	72.590	MGP_CAROLIEiJ_G0015475	Pcbp3	99	73.362	Mus_caroli
ENSSLDG00000021064	zgc:110045	72	72.590	ENSMUSG00000001120	Pcbp3	99	73.362	Mus_musculus
ENSSLDG00000021064	zgc:110045	72	72.590	MGP_PahariEiJ_G0030889	Pcbp3	99	73.362	Mus_pahari
ENSSLDG00000021064	zgc:110045	72	72.590	MGP_SPRETEiJ_G0016288	Pcbp3	99	73.362	Mus_spretus
ENSSLDG00000021064	zgc:110045	72	72.372	ENSMLUG00000003074	PCBP3	88	72.372	Myotis_lucifugus
ENSSLDG00000021064	zgc:110045	72	72.372	ENSNGAG00000005416	Pcbp3	88	72.372	Nannospalax_galili
ENSSLDG00000021064	zgc:110045	100	97.696	ENSNBRG00000017646	zgc:110045	100	97.696	Neolamprologus_brichardi
ENSSLDG00000021064	zgc:110045	72	76.997	ENSNLEG00000002639	PCBP3	88	76.997	Nomascus_leucogenys
ENSSLDG00000021064	zgc:110045	72	66.571	ENSMEUG00000012960	PCBP3	97	66.571	Notamacropus_eugenii
ENSSLDG00000021064	zgc:110045	72	69.970	ENSODEG00000012873	PCBP3	89	69.970	Octodon_degus
ENSSLDG00000021064	zgc:110045	100	92.857	ENSONIG00000010370	zgc:110045	100	92.857	Oreochromis_niloticus
ENSSLDG00000021064	zgc:110045	87	71.875	ENSOANG00000006265	PCBP3	90	71.875	Ornithorhynchus_anatinus
ENSSLDG00000021064	zgc:110045	100	93.548	ENSORLG00000014385	-	100	93.548	Oryzias_latipes
ENSSLDG00000021064	zgc:110045	100	92.396	ENSORLG00020003139	zgc:110045	100	93.088	Oryzias_latipes_hni
ENSSLDG00000021064	zgc:110045	100	94.009	ENSOMEG00000015459	-	100	94.009	Oryzias_melastigma
ENSSLDG00000021064	zgc:110045	72	70.091	ENSOARG00000012704	PCBP3	88	70.091	Ovis_aries
ENSSLDG00000021064	zgc:110045	72	76.997	ENSPPAG00000021940	PCBP3	88	76.997	Pan_paniscus
ENSSLDG00000021064	zgc:110045	72	76.677	ENSPPRG00000003933	PCBP3	88	76.677	Panthera_pardus
ENSSLDG00000021064	zgc:110045	72	62.658	ENSPTIG00000012038	PCBP3	87	63.259	Panthera_tigris_altaica
ENSSLDG00000021064	zgc:110045	72	56.550	ENSPTRG00000014010	PCBP3	97	51.136	Pan_troglodytes
ENSSLDG00000021064	zgc:110045	72	76.997	ENSPANG00000023631	PCBP3	88	76.997	Papio_anubis
ENSSLDG00000021064	zgc:110045	50	57.604	ENSPMGG00000022531	-	96	57.604	Periophthalmus_magnuspinnatus
ENSSLDG00000021064	zgc:110045	100	75.737	ENSPMGG00000021588	-	99	75.964	Periophthalmus_magnuspinnatus
ENSSLDG00000021064	zgc:110045	72	72.372	ENSPEMG00000000587	Pcbp3	88	72.372	Peromyscus_maniculatus_bairdii
ENSSLDG00000021064	zgc:110045	76	93.976	ENSPFOG00000002348	zgc:110045	100	93.976	Poecilia_formosa
ENSSLDG00000021064	zgc:110045	50	92.202	ENSPLAG00000017488	zgc:110045	96	92.202	Poecilia_latipinna
ENSSLDG00000021064	zgc:110045	73	96.330	ENSPMEG00000012762	zgc:110045	96	96.330	Poecilia_mexicana
ENSSLDG00000021064	zgc:110045	100	92.857	ENSPREG00000001797	zgc:110045	100	92.857	Poecilia_reticulata
ENSSLDG00000021064	zgc:110045	57	69.349	ENSPPYG00000011525	-	94	69.349	Pongo_abelii
ENSSLDG00000021064	zgc:110045	70	58.529	ENSPCAG00000001454	PCBP3	98	58.529	Procavia_capensis
ENSSLDG00000021064	zgc:110045	72	76.677	ENSPCOG00000013797	PCBP3	88	76.677	Propithecus_coquereli
ENSSLDG00000021064	zgc:110045	56	76.471	ENSPVAG00000000832	PCBP3	73	76.471	Pteropus_vampyrus
ENSSLDG00000021064	zgc:110045	73	93.548	ENSPNYG00000004637	zgc:110045	99	93.548	Pundamilia_nyererei
ENSSLDG00000021064	zgc:110045	60	95.408	ENSPNYG00000004656	-	98	95.408	Pundamilia_nyererei
ENSSLDG00000021064	zgc:110045	50	80.184	ENSPNAG00000004501	zgc:110045	97	80.184	Pygocentrus_nattereri
ENSSLDG00000021064	zgc:110045	72	76.997	ENSRROG00000034567	PCBP3	88	76.997	Rhinopithecus_roxellana
ENSSLDG00000021064	zgc:110045	72	76.997	ENSSBOG00000005789	PCBP3	88	76.997	Saimiri_boliviensis_boliviensis
ENSSLDG00000021064	zgc:110045	100	96.774	ENSSMAG00000013541	zgc:110045	100	96.774	Scophthalmus_maximus
ENSSLDG00000021064	zgc:110045	97	99.710	ENSSDUG00000019371	zgc:110045	100	99.710	Seriola_dumerili
ENSSLDG00000021064	zgc:110045	73	99.367	ENSSPAG00000000563	zgc:110045	97	99.367	Stegastes_partitus
ENSSLDG00000021064	zgc:110045	72	76.677	ENSSSCG00000023041	PCBP3	88	76.677	Sus_scrofa
ENSSLDG00000021064	zgc:110045	54	58.650	ENSTBEG00000011882	-	73	58.650	Tupaia_belangeri
ENSSLDG00000021064	zgc:110045	69	76.087	ENSUAMG00000006491	PCBP3	96	76.087	Ursus_americanus
ENSSLDG00000021064	zgc:110045	72	64.286	ENSUMAG00000025403	PCBP3	88	64.286	Ursus_maritimus
ENSSLDG00000021064	zgc:110045	72	67.692	ENSVVUG00000023862	PCBP3	97	63.988	Vulpes_vulpes
ENSSLDG00000021064	zgc:110045	74	85.185	ENSXCOG00000005968	zgc:110045	96	85.185	Xiphophorus_couchianus
ENSSLDG00000021064	zgc:110045	100	93.318	ENSXMAG00000008030	zgc:110045	100	93.318	Xiphophorus_maculatus