EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000021273 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 33636 bases
Position: chrPEQF01099424.1:300758-334393
Accession: 111645237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000027409	XRN_N	PF03159.18	8.1e-101	1	1
ENSSLDP00000027454	XRN_N	PF03159.18	8.1e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000028245	-	2806	XM_023394344	ENSSLDP00000027409	889 (aa)	XP_023250112	-
ENSSLDT00000028291	-	2761	XM_023394345	ENSSLDP00000027454	874 (aa)	XP_023250113	-

Gene Model

Click here to download ENSSLDG00000021273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021273's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021273	xrn2	100	73.559	ENSG00000088930	XRN2	93	73.559	Homo_sapiens
ENSSLDG00000021273	xrn2	99	92.752	ENSAPOG00000009818	xrn2	91	92.688	Acanthochromis_polyacanthus
ENSSLDG00000021273	xrn2	100	73.785	ENSAMEG00000012581	XRN2	93	73.785	Ailuropoda_melanoleuca
ENSSLDG00000021273	xrn2	98	83.446	ENSACIG00000015047	xrn2	95	89.695	Amphilophus_citrinellus
ENSSLDG00000021273	xrn2	99	93.311	ENSAOCG00000023632	xrn2	91	93.251	Amphiprion_ocellaris
ENSSLDG00000021273	xrn2	99	93.205	ENSAPEG00000014871	xrn2	91	93.138	Amphiprion_percula
ENSSLDG00000021273	xrn2	99	93.658	ENSATEG00000001273	xrn2	93	93.701	Anabas_testudineus
ENSSLDG00000021273	xrn2	95	74.790	ENSAPLG00000013869	XRN2	90	74.790	Anas_platyrhynchos
ENSSLDG00000021273	xrn2	99	73.708	ENSACAG00000005565	XRN2	92	73.708	Anolis_carolinensis
ENSSLDG00000021273	xrn2	100	73.559	ENSANAG00000020126	XRN2	93	73.559	Aotus_nancymaae
ENSSLDG00000021273	xrn2	98	88.364	ENSACLG00000010522	xrn2	98	88.364	Astatotilapia_calliptera
ENSSLDG00000021273	xrn2	100	85.128	ENSAMXG00000018301	xrn2	93	85.128	Astyanax_mexicanus
ENSSLDG00000021273	xrn2	100	73.251	ENSBTAG00000011304	XRN2	93	73.251	Bos_taurus
ENSSLDG00000021273	xrn2	94	54.439	WBGene00006964	xrn-2	88	54.157	Caenorhabditis_elegans
ENSSLDG00000021273	xrn2	100	73.446	ENSCJAG00000005611	XRN2	93	73.446	Callithrix_jacchus
ENSSLDG00000021273	xrn2	100	73.785	ENSCAFG00000005185	XRN2	93	73.785	Canis_familiaris
ENSSLDG00000021273	xrn2	100	73.785	ENSCAFG00020027479	XRN2	93	73.785	Canis_lupus_dingo
ENSSLDG00000021273	xrn2	100	73.138	ENSCHIG00000006921	XRN2	93	73.138	Capra_hircus
ENSSLDG00000021273	xrn2	100	73.643	ENSTSYG00000008315	XRN2	93	73.643	Carlito_syrichta
ENSSLDG00000021273	xrn2	94	64.586	ENSCAPG00000010773	XRN2	88	63.505	Cavia_aperea
ENSSLDG00000021273	xrn2	100	74.379	ENSCPOG00000009407	XRN2	93	74.379	Cavia_porcellus
ENSSLDG00000021273	xrn2	100	73.446	ENSCATG00000040350	XRN2	94	73.446	Cercocebus_atys
ENSSLDG00000021273	xrn2	100	73.785	ENSCLAG00000013419	XRN2	93	73.785	Chinchilla_lanigera
ENSSLDG00000021273	xrn2	100	73.446	ENSCSAG00000011094	XRN2	93	73.446	Chlorocebus_sabaeus
ENSSLDG00000021273	xrn2	66	88.172	ENSCHOG00000013404	XRN2	63	88.172	Choloepus_hoffmanni
ENSSLDG00000021273	xrn2	99	74.379	ENSCPBG00000023533	XRN2	92	74.379	Chrysemys_picta_bellii
ENSSLDG00000021273	xrn2	93	60.787	ENSCING00000022336	-	100	61.383	Ciona_intestinalis
ENSSLDG00000021273	xrn2	88	70.000	ENSCSAVG00000011217	-	93	71.084	Ciona_savignyi
ENSSLDG00000021273	xrn2	100	73.446	ENSCANG00000040240	XRN2	93	73.446	Colobus_angolensis_palliatus
ENSSLDG00000021273	xrn2	100	74.661	ENSCGRG00001010676	Xrn2	95	74.774	Cricetulus_griseus_chok1gshd
ENSSLDG00000021273	xrn2	97	73.690	ENSCGRG00000006378	Xrn2	92	73.807	Cricetulus_griseus_crigri
ENSSLDG00000021273	xrn2	58	84.387	ENSCSEG00000005628	xrn2	100	84.190	Cynoglossus_semilaevis
ENSSLDG00000021273	xrn2	98	86.887	ENSCVAG00000018999	xrn2	98	94.646	Cyprinodon_variegatus
ENSSLDG00000021273	xrn2	97	84.783	ENSDARG00000101900	xrn2	96	87.595	Danio_rerio
ENSSLDG00000021273	xrn2	100	73.785	ENSDNOG00000001895	XRN2	93	73.785	Dasypus_novemcinctus
ENSSLDG00000021273	xrn2	100	72.316	ENSDORG00000005434	Xrn2	93	72.316	Dipodomys_ordii
ENSSLDG00000021273	xrn2	93	56.707	FBgn0031868	Rat1	96	54.343	Drosophila_melanogaster
ENSSLDG00000021273	xrn2	91	80.779	ENSETEG00000001740	XRN2	85	80.779	Echinops_telfairi
ENSSLDG00000021273	xrn2	91	68.568	ENSEBUG00000016136	xrn2	100	68.568	Eptatretus_burgeri
ENSSLDG00000021273	xrn2	100	74.011	ENSEASG00005002484	XRN2	93	74.011	Equus_asinus_asinus
ENSSLDG00000021273	xrn2	94	88.462	ENSECAG00000018988	XRN2	89	88.462	Equus_caballus
ENSSLDG00000021273	xrn2	72	92.000	ENSEEUG00000009265	XRN2	67	92.000	Erinaceus_europaeus
ENSSLDG00000021273	xrn2	99	86.981	ENSELUG00000000552	xrn2	91	86.860	Esox_lucius
ENSSLDG00000021273	xrn2	100	73.559	ENSFCAG00000007970	XRN2	93	73.559	Felis_catus
ENSSLDG00000021273	xrn2	97	75.116	ENSFALG00000004508	XRN2	89	75.939	Ficedula_albicollis
ENSSLDG00000021273	xrn2	100	73.672	ENSFDAG00000016311	XRN2	93	73.672	Fukomys_damarensis
ENSSLDG00000021273	xrn2	59	86.015	ENSFHEG00000013039	xrn2	98	86.015	Fundulus_heteroclitus
ENSSLDG00000021273	xrn2	93	82.641	ENSGMOG00000013436	xrn2	100	82.641	Gadus_morhua
ENSSLDG00000021273	xrn2	99	73.750	ENSGALG00000008372	XRN2	93	73.750	Gallus_gallus
ENSSLDG00000021273	xrn2	98	87.802	ENSGAFG00000014284	xrn2	99	87.802	Gambusia_affinis
ENSSLDG00000021273	xrn2	94	87.046	ENSGACG00000011870	xrn2	96	91.171	Gasterosteus_aculeatus
ENSSLDG00000021273	xrn2	99	74.266	ENSGAGG00000004884	XRN2	92	74.266	Gopherus_agassizii
ENSSLDG00000021273	xrn2	100	73.446	ENSGGOG00000013738	XRN2	93	73.446	Gorilla_gorilla
ENSSLDG00000021273	xrn2	59	89.272	ENSHBUG00000005077	xrn2	94	89.272	Haplochromis_burtoni
ENSSLDG00000021273	xrn2	100	72.912	ENSHGLG00000014831	XRN2	93	72.912	Heterocephalus_glaber_female
ENSSLDG00000021273	xrn2	100	72.912	ENSHGLG00100013130	XRN2	93	72.912	Heterocephalus_glaber_male
ENSSLDG00000021273	xrn2	99	86.195	ENSHCOG00000011994	xrn2	95	83.759	Hippocampus_comes
ENSSLDG00000021273	xrn2	100	82.965	ENSIPUG00000006639	xrn2	93	82.965	Ictalurus_punctatus
ENSSLDG00000021273	xrn2	100	73.785	ENSSTOG00000000589	XRN2	93	73.785	Ictidomys_tridecemlineatus
ENSSLDG00000021273	xrn2	100	74.011	ENSJJAG00000022128	Xrn2	93	74.011	Jaculus_jaculus
ENSSLDG00000021273	xrn2	58	93.676	ENSLBEG00000010041	xrn2	100	93.676	Labrus_bergylta
ENSSLDG00000021273	xrn2	95	75.149	ENSLACG00000008307	XRN2	97	76.837	Latimeria_chalumnae
ENSSLDG00000021273	xrn2	100	77.627	ENSLOCG00000016874	xrn2	93	82.368	Lepisosteus_oculatus
ENSSLDG00000021273	xrn2	100	74.266	ENSLAFG00000014624	XRN2	93	74.266	Loxodonta_africana
ENSSLDG00000021273	xrn2	100	73.446	ENSMFAG00000038122	XRN2	93	73.446	Macaca_fascicularis
ENSSLDG00000021273	xrn2	100	73.446	ENSMMUG00000011405	XRN2	93	73.446	Macaca_mulatta
ENSSLDG00000021273	xrn2	100	73.333	ENSMNEG00000040626	XRN2	93	73.333	Macaca_nemestrina
ENSSLDG00000021273	xrn2	100	73.333	ENSMLEG00000041897	XRN2	93	73.333	Mandrillus_leucophaeus
ENSSLDG00000021273	xrn2	99	94.009	ENSMAMG00000008633	xrn2	92	94.050	Mastacembelus_armatus
ENSSLDG00000021273	xrn2	98	90.207	ENSMZEG00005022362	xrn2	98	90.207	Maylandia_zebra
ENSSLDG00000021273	xrn2	99	73.303	ENSMGAG00000003196	XRN2	92	73.303	Meleagris_gallopavo
ENSSLDG00000021273	xrn2	100	74.661	ENSMAUG00000021842	Xrn2	93	74.661	Mesocricetus_auratus
ENSSLDG00000021273	xrn2	99	74.150	ENSMICG00000008126	XRN2	93	74.150	Microcebus_murinus
ENSSLDG00000021273	xrn2	100	74.237	ENSMOCG00000012588	Xrn2	93	74.350	Microtus_ochrogaster
ENSSLDG00000021273	xrn2	98	89.318	ENSMMOG00000017576	xrn2	97	88.927	Mola_mola
ENSSLDG00000021273	xrn2	100	74.576	ENSMODG00000006163	XRN2	93	74.576	Monodelphis_domestica
ENSSLDG00000021273	xrn2	98	88.977	ENSMALG00000011355	xrn2	95	94.242	Monopterus_albus
ENSSLDG00000021273	xrn2	100	74.237	MGP_CAROLIEiJ_G0024400	Xrn2	93	74.237	Mus_caroli
ENSSLDG00000021273	xrn2	100	74.237	ENSMUSG00000027433	Xrn2	93	74.237	Mus_musculus
ENSSLDG00000021273	xrn2	100	74.011	MGP_PahariEiJ_G0025843	Xrn2	93	74.011	Mus_pahari
ENSSLDG00000021273	xrn2	100	74.237	MGP_SPRETEiJ_G0025318	Xrn2	94	85.149	Mus_spretus
ENSSLDG00000021273	xrn2	100	72.284	ENSMPUG00000001198	XRN2	87	72.284	Mustela_putorius_furo
ENSSLDG00000021273	xrn2	100	73.643	ENSMLUG00000001536	XRN2	93	73.643	Myotis_lucifugus
ENSSLDG00000021273	xrn2	100	74.266	ENSNGAG00000018138	Xrn2	93	74.266	Nannospalax_galili
ENSSLDG00000021273	xrn2	98	90.207	ENSNBRG00000008062	xrn2	98	90.207	Neolamprologus_brichardi
ENSSLDG00000021273	xrn2	100	73.446	ENSNLEG00000009991	XRN2	93	73.446	Nomascus_leucogenys
ENSSLDG00000021273	xrn2	56	84.444	ENSMEUG00000008622	-	53	84.444	Notamacropus_eugenii
ENSSLDG00000021273	xrn2	66	72.632	ENSOPRG00000001397	-	63	72.632	Ochotona_princeps
ENSSLDG00000021273	xrn2	95	68.900	ENSODEG00000000860	-	91	68.780	Octodon_degus
ENSSLDG00000021273	xrn2	100	73.672	ENSODEG00000010745	-	93	73.672	Octodon_degus
ENSSLDG00000021273	xrn2	99	90.260	ENSONIG00000018720	xrn2	92	88.549	Oreochromis_niloticus
ENSSLDG00000021273	xrn2	99	74.036	ENSOANG00000015673	XRN2	93	74.036	Ornithorhynchus_anatinus
ENSSLDG00000021273	xrn2	100	73.898	ENSOCUG00000013468	XRN2	93	73.898	Oryctolagus_cuniculus
ENSSLDG00000021273	xrn2	100	88.189	ENSORLG00000017213	xrn2	99	88.209	Oryzias_latipes
ENSSLDG00000021273	xrn2	100	88.076	ENSORLG00020001824	xrn2	93	88.076	Oryzias_latipes_hni
ENSSLDG00000021273	xrn2	100	87.627	ENSORLG00015019747	xrn2	93	87.627	Oryzias_latipes_hsok
ENSSLDG00000021273	xrn2	99	89.408	ENSOMEG00000019820	xrn2	91	88.976	Oryzias_melastigma
ENSSLDG00000021273	xrn2	100	73.702	ENSOGAG00000001068	XRN2	93	73.702	Otolemur_garnettii
ENSSLDG00000021273	xrn2	97	72.674	ENSOARG00000004443	XRN2	93	72.674	Ovis_aries
ENSSLDG00000021273	xrn2	100	73.446	ENSPPAG00000033549	XRN2	93	73.446	Pan_paniscus
ENSSLDG00000021273	xrn2	100	73.559	ENSPPRG00000008732	XRN2	93	73.559	Panthera_pardus
ENSSLDG00000021273	xrn2	97	73.108	ENSPTIG00000015683	XRN2	90	73.108	Panthera_tigris_altaica
ENSSLDG00000021273	xrn2	100	73.446	ENSPTRG00000013308	XRN2	93	73.446	Pan_troglodytes
ENSSLDG00000021273	xrn2	100	73.446	ENSPANG00000018088	XRN2	93	73.446	Papio_anubis
ENSSLDG00000021273	xrn2	99	83.015	ENSPKIG00000016889	xrn2	92	83.015	Paramormyrops_kingsleyae
ENSSLDG00000021273	xrn2	87	76.524	ENSPSIG00000014666	XRN2	100	76.524	Pelodiscus_sinensis
ENSSLDG00000021273	xrn2	100	74.041	ENSPEMG00000000111	Xrn2	93	74.041	Peromyscus_maniculatus_bairdii
ENSSLDG00000021273	xrn2	98	87.657	ENSPFOG00000004182	xrn2	92	86.771	Poecilia_formosa
ENSSLDG00000021273	xrn2	98	87.802	ENSPLAG00000007351	xrn2	97	87.802	Poecilia_latipinna
ENSSLDG00000021273	xrn2	92	86.967	ENSPMEG00000011798	xrn2	92	86.038	Poecilia_mexicana
ENSSLDG00000021273	xrn2	98	87.986	ENSPREG00000012452	xrn2	99	87.093	Poecilia_reticulata
ENSSLDG00000021273	xrn2	100	73.220	ENSPPYG00000010755	XRN2	93	73.220	Pongo_abelii
ENSSLDG00000021273	xrn2	100	69.932	ENSPCAG00000011191	XRN2	93	69.932	Procavia_capensis
ENSSLDG00000021273	xrn2	99	67.687	ENSPCOG00000016468	XRN2	92	67.687	Propithecus_coquereli
ENSSLDG00000021273	xrn2	92	66.365	ENSPVAG00000004596	XRN2	85	66.365	Pteropus_vampyrus
ENSSLDG00000021273	xrn2	98	88.364	ENSPNYG00000001765	xrn2	98	88.364	Pundamilia_nyererei
ENSSLDG00000021273	xrn2	100	82.503	ENSPNAG00000010956	xrn2	93	82.503	Pygocentrus_nattereri
ENSSLDG00000021273	xrn2	100	74.831	ENSRNOG00000011785	Xrn2	93	74.944	Rattus_norvegicus
ENSSLDG00000021273	xrn2	93	76.341	ENSRBIG00000036193	XRN2	100	76.341	Rhinopithecus_bieti
ENSSLDG00000021273	xrn2	100	73.446	ENSRROG00000044400	XRN2	84	73.446	Rhinopithecus_roxellana
ENSSLDG00000021273	xrn2	77	51.087	YOR048C	RAT1	63	53.735	Saccharomyces_cerevisiae
ENSSLDG00000021273	xrn2	100	73.672	ENSSBOG00000021014	XRN2	93	73.672	Saimiri_boliviensis_boliviensis
ENSSLDG00000021273	xrn2	100	83.408	ENSSFOG00015001091	xrn2	93	83.408	Scleropages_formosus
ENSSLDG00000021273	xrn2	99	91.053	ENSSMAG00000007834	xrn2	91	90.695	Scophthalmus_maximus
ENSSLDG00000021273	xrn2	98	95.914	ENSSDUG00000012802	xrn2	99	95.914	Seriola_dumerili
ENSSLDG00000021273	xrn2	68	92.000	ENSSARG00000005859	-	55	92.000	Sorex_araneus
ENSSLDG00000021273	xrn2	97	73.023	ENSSPUG00000005485	XRN2	88	73.023	Sphenodon_punctatus
ENSSLDG00000021273	xrn2	99	92.412	ENSSPAG00000016027	xrn2	91	92.351	Stegastes_partitus
ENSSLDG00000021273	xrn2	100	72.542	ENSSSCG00000007109	XRN2	93	72.542	Sus_scrofa
ENSSLDG00000021273	xrn2	97	73.782	ENSTGUG00000007535	XRN2	89	74.590	Taeniopygia_guttata
ENSSLDG00000021273	xrn2	99	88.235	ENSTRUG00000015489	xrn2	90	87.991	Takifugu_rubripes
ENSSLDG00000021273	xrn2	99	87.630	ENSTNIG00000010712	xrn2	91	87.630	Tetraodon_nigroviridis
ENSSLDG00000021273	xrn2	100	73.220	ENSTBEG00000004119	XRN2	93	73.220	Tupaia_belangeri
ENSSLDG00000021273	xrn2	92	78.636	ENSTTRG00000009087	XRN2	86	78.636	Tursiops_truncatus
ENSSLDG00000021273	xrn2	100	73.785	ENSUAMG00000024634	XRN2	98	70.375	Ursus_americanus
ENSSLDG00000021273	xrn2	97	73.225	ENSUMAG00000004012	XRN2	88	73.225	Ursus_maritimus
ENSSLDG00000021273	xrn2	79	83.819	ENSVPAG00000010694	XRN2	77	83.819	Vicugna_pacos
ENSSLDG00000021273	xrn2	100	73.785	ENSVVUG00000012178	XRN2	93	73.785	Vulpes_vulpes
ENSSLDG00000021273	xrn2	99	76.678	ENSXETG00000023501	xrn2	94	76.678	Xenopus_tropicalis
ENSSLDG00000021273	xrn2	98	87.886	ENSXMAG00000000242	xrn2	92	89.538	Xiphophorus_maculatus