EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000021406 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 26106 bases
Position: chrPEQF01098423.1:213661-239766
Accession: 111652324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000027596	Exo_endo_phos	PF03372.23	5.6e-14	1	1
ENSSLDP00000027690	Exo_endo_phos	PF03372.23	8.9e-14	1	1
ENSSLDP00000027630	Exo_endo_phos	PF03372.23	9.1e-14	1	1
ENSSLDP00000027596	DUF1866	PF08952.11	7.1e-58	1	1
ENSSLDP00000027690	DUF1866	PF08952.11	9.4e-58	1	1
ENSSLDP00000027630	DUF1866	PF08952.11	9.4e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000028467	-	7766	XM_023402554	ENSSLDP00000027630	1644 (aa)	XP_023258322	-
ENSSLDT00000028529	-	7742	-	ENSSLDP00000027690	1636 (aa)	-	-
ENSSLDT00000028434	-	7790	-	ENSSLDP00000027596	1312 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000021406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021406	synj1	96	71.173	ENSG00000159082	SYNJ1	100	82.783	Homo_sapiens
ENSSLDG00000021406	synj1	100	92.690	ENSAPOG00000002809	synj1	100	89.553	Acanthochromis_polyacanthus
ENSSLDG00000021406	synj1	96	68.075	ENSAMEG00000015028	SYNJ1	67	76.636	Ailuropoda_melanoleuca
ENSSLDG00000021406	synj1	99	91.159	ENSACIG00000008857	synj1	99	90.244	Amphilophus_citrinellus
ENSSLDG00000021406	synj1	100	93.958	ENSAOCG00000009835	synj1	99	92.573	Amphiprion_ocellaris
ENSSLDG00000021406	synj1	100	93.218	ENSAPEG00000021010	synj1	100	90.284	Amphiprion_percula
ENSSLDG00000021406	synj1	100	91.882	ENSATEG00000002306	synj1	100	87.969	Anabas_testudineus
ENSSLDG00000021406	synj1	95	66.463	ENSAPLG00000011832	SYNJ1	83	65.545	Anas_platyrhynchos
ENSSLDG00000021406	synj1	96	68.963	ENSACAG00000003006	-	100	67.081	Anolis_carolinensis
ENSSLDG00000021406	synj1	96	68.574	ENSANAG00000027325	SYNJ1	84	76.342	Aotus_nancymaae
ENSSLDG00000021406	synj1	100	91.452	ENSACLG00000002255	synj1	100	89.865	Astatotilapia_calliptera
ENSSLDG00000021406	synj1	99	84.832	ENSAMXG00000008208	synj1	80	81.694	Astyanax_mexicanus
ENSSLDG00000021406	synj1	93	73.130	ENSBTAG00000003063	SYNJ1	83	76.152	Bos_taurus
ENSSLDG00000021406	synj1	96	70.918	ENSCJAG00000009187	SYNJ1	84	76.407	Callithrix_jacchus
ENSSLDG00000021406	synj1	96	70.342	ENSCAFG00000009041	SYNJ1	99	66.267	Canis_familiaris
ENSSLDG00000021406	synj1	100	68.138	ENSCAFG00020025776	SYNJ1	84	75.996	Canis_lupus_dingo
ENSSLDG00000021406	synj1	96	70.862	ENSCHIG00000005095	SYNJ1	85	66.569	Capra_hircus
ENSSLDG00000021406	synj1	96	70.584	ENSTSYG00000014541	SYNJ1	100	66.691	Carlito_syrichta
ENSSLDG00000021406	synj1	86	64.756	ENSCAPG00000014483	SYNJ1	75	66.698	Cavia_aperea
ENSSLDG00000021406	synj1	96	70.730	ENSCPOG00000012182	SYNJ1	100	66.010	Cavia_porcellus
ENSSLDG00000021406	synj1	96	70.684	ENSCCAG00000020825	SYNJ1	84	76.385	Cebus_capucinus
ENSSLDG00000021406	synj1	96	70.629	ENSCATG00000033891	SYNJ1	100	67.235	Cercocebus_atys
ENSSLDG00000021406	synj1	96	67.844	ENSCLAG00000009796	SYNJ1	100	82.590	Chinchilla_lanigera
ENSSLDG00000021406	synj1	96	69.434	ENSCSAG00000009654	SYNJ1	84	76.407	Chlorocebus_sabaeus
ENSSLDG00000021406	synj1	74	73.271	ENSCHOG00000012390	SYNJ1	54	73.271	Choloepus_hoffmanni
ENSSLDG00000021406	synj1	90	72.227	ENSCPBG00000006402	SYNJ1	88	76.636	Chrysemys_picta_bellii
ENSSLDG00000021406	synj1	100	67.230	ENSCANG00000031359	SYNJ1	100	67.383	Colobus_angolensis_palliatus
ENSSLDG00000021406	synj1	96	70.515	ENSCGRG00001010861	Synj1	83	76.047	Cricetulus_griseus_chok1gshd
ENSSLDG00000021406	synj1	100	66.351	ENSCGRG00000015749	Synj1	100	81.727	Cricetulus_griseus_crigri
ENSSLDG00000021406	synj1	95	90.779	ENSCSEG00000019614	synj1	98	92.442	Cynoglossus_semilaevis
ENSSLDG00000021406	synj1	100	87.528	ENSCVAG00000019250	synj1	100	86.992	Cyprinodon_variegatus
ENSSLDG00000021406	synj1	100	83.446	ENSDARG00000025011	synj1	100	83.696	Danio_rerio
ENSSLDG00000021406	synj1	96	65.116	ENSDNOG00000010732	SYNJ1	70	73.219	Dasypus_novemcinctus
ENSSLDG00000021406	synj1	53	81.650	ENSDORG00000014735	-	100	82.590	Dipodomys_ordii
ENSSLDG00000021406	synj1	82	78.417	ENSETEG00000018674	SYNJ1	60	78.417	Echinops_telfairi
ENSSLDG00000021406	synj1	99	69.248	ENSEASG00005006287	SYNJ1	96	78.413	Equus_asinus_asinus
ENSSLDG00000021406	synj1	99	69.724	ENSECAG00000004829	SYNJ1	100	67.315	Equus_caballus
ENSSLDG00000021406	synj1	86	71.963	ENSEEUG00000005150	SYNJ1	60	71.963	Erinaceus_europaeus
ENSSLDG00000021406	synj1	100	79.031	ENSELUG00000009731	synj1	94	83.063	Esox_lucius
ENSSLDG00000021406	synj1	96	68.678	ENSFCAG00000012498	SYNJ1	100	66.838	Felis_catus
ENSSLDG00000021406	synj1	78	49.781	ENSFALG00000004680	SYNJ1	61	69.725	Ficedula_albicollis
ENSSLDG00000021406	synj1	96	68.604	ENSFDAG00000016818	SYNJ1	100	82.878	Fukomys_damarensis
ENSSLDG00000021406	synj1	100	88.306	ENSFHEG00000017689	synj1	99	82.009	Fundulus_heteroclitus
ENSSLDG00000021406	synj1	80	87.314	ENSGMOG00000014852	synj1	81	87.463	Gadus_morhua
ENSSLDG00000021406	synj1	99	88.992	ENSGAFG00000019466	synj1	100	84.166	Gambusia_affinis
ENSSLDG00000021406	synj1	99	86.391	ENSGACG00000020575	synj1	99	86.662	Gasterosteus_aculeatus
ENSSLDG00000021406	synj1	96	70.730	ENSGAGG00000022523	SYNJ1	100	68.003	Gopherus_agassizii
ENSSLDG00000021406	synj1	96	71.018	ENSGGOG00000015945	SYNJ1	100	67.437	Gorilla_gorilla
ENSSLDG00000021406	synj1	100	91.064	ENSHBUG00000007774	synj1	100	90.390	Haplochromis_burtoni
ENSSLDG00000021406	synj1	96	67.295	ENSHGLG00000006420	SYNJ1	100	82.158	Heterocephalus_glaber_female
ENSSLDG00000021406	synj1	96	69.504	ENSHGLG00100012591	SYNJ1	100	82.158	Heterocephalus_glaber_male
ENSSLDG00000021406	synj1	94	95.190	ENSHCOG00000012774	synj1	82	95.190	Hippocampus_comes
ENSSLDG00000021406	synj1	98	85.100	ENSIPUG00000010691	SYNJ1	99	74.334	Ictalurus_punctatus
ENSSLDG00000021406	synj1	96	68.425	ENSSTOG00000015806	SYNJ1	100	68.409	Ictidomys_tridecemlineatus
ENSSLDG00000021406	synj1	96	63.150	ENSJJAG00000020168	Synj1	82	63.636	Jaculus_jaculus
ENSSLDG00000021406	synj1	100	81.906	ENSKMAG00000004221	synj1	93	87.477	Kryptolebias_marmoratus
ENSSLDG00000021406	synj1	100	87.224	ENSLBEG00000015081	synj1	99	86.968	Labrus_bergylta
ENSSLDG00000021406	synj1	99	67.459	ENSLACG00000005928	SYNJ1	70	76.087	Latimeria_chalumnae
ENSSLDG00000021406	synj1	96	73.449	ENSLOCG00000009230	synj1	73	83.045	Lepisosteus_oculatus
ENSSLDG00000021406	synj1	96	67.498	ENSLAFG00000011806	SYNJ1	69	75.996	Loxodonta_africana
ENSSLDG00000021406	synj1	94	69.475	ENSMFAG00000018883	SYNJ1	99	66.187	Macaca_fascicularis
ENSSLDG00000021406	synj1	96	69.302	ENSMMUG00000004624	SYNJ1	84	76.109	Macaca_mulatta
ENSSLDG00000021406	synj1	96	70.652	ENSMNEG00000040077	SYNJ1	79	76.268	Macaca_nemestrina
ENSSLDG00000021406	synj1	96	70.575	ENSMLEG00000037029	SYNJ1	100	67.309	Mandrillus_leucophaeus
ENSSLDG00000021406	synj1	100	92.803	ENSMAMG00000013404	synj1	100	89.553	Mastacembelus_armatus
ENSSLDG00000021406	synj1	100	93.192	ENSMZEG00005024358	synj1	100	92.511	Maylandia_zebra
ENSSLDG00000021406	synj1	93	69.414	ENSMGAG00000014522	SYNJ1	84	64.017	Meleagris_gallopavo
ENSSLDG00000021406	synj1	100	68.891	ENSMAUG00000009743	Synj1	100	81.871	Mesocricetus_auratus
ENSSLDG00000021406	synj1	96	70.652	ENSMICG00000034953	SYNJ1	100	67.208	Microcebus_murinus
ENSSLDG00000021406	synj1	99	85.334	ENSMMOG00000010203	synj1	85	92.897	Mola_mola
ENSSLDG00000021406	synj1	99	62.381	ENSMODG00000021073	SYNJ1	82	72.946	Monodelphis_domestica
ENSSLDG00000021406	synj1	100	89.211	ENSMALG00000014015	synj1	100	86.722	Monopterus_albus
ENSSLDG00000021406	synj1	97	68.134	MGP_CAROLIEiJ_G0020951	Synj1	100	82.590	Mus_caroli
ENSSLDG00000021406	synj1	96	68.934	ENSMUSG00000022973	Synj1	100	82.590	Mus_musculus
ENSSLDG00000021406	synj1	96	68.405	MGP_PahariEiJ_G0016656	Synj1	100	82.302	Mus_pahari
ENSSLDG00000021406	synj1	96	68.934	MGP_SPRETEiJ_G0021857	Synj1	100	82.446	Mus_spretus
ENSSLDG00000021406	synj1	95	68.140	ENSMPUG00000001153	SYNJ1	70	75.564	Mustela_putorius_furo
ENSSLDG00000021406	synj1	61	62.293	ENSMLUG00000005764	-	54	72.049	Myotis_lucifugus
ENSSLDG00000021406	synj1	52	80.502	ENSMLUG00000026584	-	100	80.502	Myotis_lucifugus
ENSSLDG00000021406	synj1	98	66.766	ENSNGAG00000000453	Synj1	100	82.014	Nannospalax_galili
ENSSLDG00000021406	synj1	100	86.409	ENSNBRG00000011936	synj1	99	84.391	Neolamprologus_brichardi
ENSSLDG00000021406	synj1	82	67.218	ENSNLEG00000003734	SYNJ1	99	64.684	Nomascus_leucogenys
ENSSLDG00000021406	synj1	78	63.626	ENSMEUG00000004158	-	65	63.825	Notamacropus_eugenii
ENSSLDG00000021406	synj1	90	78.224	ENSOPRG00000013602	SYNJ1	63	78.224	Ochotona_princeps
ENSSLDG00000021406	synj1	53	81.508	ENSODEG00000002409	-	100	82.446	Octodon_degus
ENSSLDG00000021406	synj1	99	85.661	ENSONIG00000004667	synj1	100	82.670	Oreochromis_niloticus
ENSSLDG00000021406	synj1	91	67.089	ENSOANG00000006929	SYNJ1	69	74.486	Ornithorhynchus_anatinus
ENSSLDG00000021406	synj1	96	67.199	ENSOCUG00000001420	SYNJ1	67	77.852	Oryctolagus_cuniculus
ENSSLDG00000021406	synj1	100	88.324	ENSORLG00000004320	synj1	100	82.135	Oryzias_latipes
ENSSLDG00000021406	synj1	99	85.236	ENSORLG00020011994	synj1	98	85.942	Oryzias_latipes_hni
ENSSLDG00000021406	synj1	100	88.695	ENSORLG00015018077	synj1	95	83.804	Oryzias_latipes_hsok
ENSSLDG00000021406	synj1	100	86.874	ENSOMEG00000014322	synj1	99	86.289	Oryzias_melastigma
ENSSLDG00000021406	synj1	96	65.019	ENSOGAG00000006010	SYNJ1	68	72.858	Otolemur_garnettii
ENSSLDG00000021406	synj1	96	67.616	ENSOARG00000013414	SYNJ1	68	74.955	Ovis_aries
ENSSLDG00000021406	synj1	96	71.096	ENSPPAG00000026784	SYNJ1	100	67.532	Pan_paniscus
ENSSLDG00000021406	synj1	96	68.678	ENSPPRG00000023469	SYNJ1	100	66.838	Panthera_pardus
ENSSLDG00000021406	synj1	96	68.755	ENSPTIG00000007930	SYNJ1	100	66.912	Panthera_tigris_altaica
ENSSLDG00000021406	synj1	96	71.096	ENSPTRG00000023787	SYNJ1	100	67.586	Pan_troglodytes
ENSSLDG00000021406	synj1	96	71.096	ENSPTRG00000048135	-	100	67.586	Pan_troglodytes
ENSSLDG00000021406	synj1	96	70.652	ENSPANG00000022531	SYNJ1	100	67.383	Papio_anubis
ENSSLDG00000021406	synj1	83	85.844	ENSPKIG00000022603	synj1	89	85.740	Paramormyrops_kingsleyae
ENSSLDG00000021406	synj1	95	90.568	ENSPMGG00000016831	synj1	100	91.047	Periophthalmus_magnuspinnatus
ENSSLDG00000021406	synj1	100	69.963	ENSPEMG00000018767	Synj1	100	82.446	Peromyscus_maniculatus_bairdii
ENSSLDG00000021406	synj1	95	69.357	ENSPCIG00000016372	SYNJ1	82	75.738	Phascolarctos_cinereus
ENSSLDG00000021406	synj1	100	89.660	ENSPFOG00000016886	synj1	100	89.736	Poecilia_formosa
ENSSLDG00000021406	synj1	99	88.500	ENSPLAG00000017559	synj1	100	87.481	Poecilia_latipinna
ENSSLDG00000021406	synj1	99	88.855	ENSPMEG00000007643	synj1	100	84.150	Poecilia_mexicana
ENSSLDG00000021406	synj1	100	88.973	ENSPREG00000012412	synj1	100	88.537	Poecilia_reticulata
ENSSLDG00000021406	synj1	96	67.219	ENSPPYG00000011365	SYNJ1	79	76.225	Pongo_abelii
ENSSLDG00000021406	synj1	68	85.714	ENSPCAG00000009906	SYNJ1	72	85.714	Procavia_capensis
ENSSLDG00000021406	synj1	89	76.108	ENSPCOG00000024841	SYNJ1	95	76.427	Propithecus_coquereli
ENSSLDG00000021406	synj1	84	72.408	ENSPVAG00000000892	SYNJ1	82	65.361	Pteropus_vampyrus
ENSSLDG00000021406	synj1	100	91.351	ENSPNYG00000022989	synj1	100	90.212	Pundamilia_nyererei
ENSSLDG00000021406	synj1	83	89.627	ENSPNAG00000021119	synj1	91	89.282	Pygocentrus_nattereri
ENSSLDG00000021406	synj1	96	69.225	ENSRNOG00000002051	Synj1	100	69.139	Rattus_norvegicus
ENSSLDG00000021406	synj1	96	70.807	ENSRBIG00000034477	SYNJ1	100	67.208	Rhinopithecus_bieti
ENSSLDG00000021406	synj1	96	69.434	ENSRROG00000039256	SYNJ1	100	67.383	Rhinopithecus_roxellana
ENSSLDG00000021406	synj1	96	69.474	ENSSBOG00000021001	SYNJ1	84	76.294	Saimiri_boliviensis_boliviensis
ENSSLDG00000021406	synj1	94	66.309	ENSSHAG00000008538	SYNJ1	83	66.293	Sarcophilus_harrisii
ENSSLDG00000021406	synj1	100	82.870	ENSSFOG00015006095	synj1	100	72.939	Scleropages_formosus
ENSSLDG00000021406	synj1	99	90.045	ENSSMAG00000018066	synj1	98	89.978	Scophthalmus_maximus
ENSSLDG00000021406	synj1	100	99.086	ENSSDUG00000013058	synj1	100	99.086	Seriola_dumerili
ENSSLDG00000021406	synj1	93	71.074	ENSSPUG00000012552	SYNJ1	84	65.863	Sphenodon_punctatus
ENSSLDG00000021406	synj1	94	92.903	ENSSPAG00000006812	SYNJ1	100	90.284	Stegastes_partitus
ENSSLDG00000021406	synj1	100	93.090	ENSSPAG00000017029	synj1	99	92.154	Stegastes_partitus
ENSSLDG00000021406	synj1	97	67.116	ENSSSCG00000012035	SYNJ1	100	67.507	Sus_scrofa
ENSSLDG00000021406	synj1	96	67.347	ENSTGUG00000013445	SYNJ1	83	65.357	Taeniopygia_guttata
ENSSLDG00000021406	synj1	100	87.092	ENSTRUG00000006907	synj1	99	80.798	Takifugu_rubripes
ENSSLDG00000021406	synj1	99	79.956	ENSTNIG00000009940	synj1	100	77.858	Tetraodon_nigroviridis
ENSSLDG00000021406	synj1	89	83.544	ENSTBEG00000016298	SYNJ1	60	83.544	Tupaia_belangeri
ENSSLDG00000021406	synj1	91	77.893	ENSTTRG00000002222	SYNJ1	71	69.482	Tursiops_truncatus
ENSSLDG00000021406	synj1	96	71.629	ENSUAMG00000018606	SYNJ1	98	79.409	Ursus_americanus
ENSSLDG00000021406	synj1	98	76.727	ENSUMAG00000018419	SYNJ1	99	79.406	Ursus_maritimus
ENSSLDG00000021406	synj1	87	85.714	ENSVPAG00000001241	SYNJ1	58	85.714	Vicugna_pacos
ENSSLDG00000021406	synj1	96	68.365	ENSVVUG00000023125	SYNJ1	84	76.087	Vulpes_vulpes
ENSSLDG00000021406	synj1	96	65.697	ENSXETG00000009899	synj1	92	60.038	Xenopus_tropicalis
ENSSLDG00000021406	synj1	99	88.675	ENSXCOG00000011896	synj1	99	89.101	Xiphophorus_couchianus
ENSSLDG00000021406	synj1	100	88.914	ENSXMAG00000017524	synj1	100	88.612	Xiphophorus_maculatus