EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000021413 (Gene tree)
Gene ID: -
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 9501 bases
Position: chrPEQF01099424.1:436697-446197
Accession: 111645235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000027636	HAT	PF02184.16	3.2e-38	1	2
ENSSLDP00000027636	HAT	PF02184.16	3.2e-38	2	2
ENSSLDP00000027680	HAT	PF02184.16	1.5e-25	1	2
ENSSLDP00000027680	HAT	PF02184.16	1.5e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000028519	-	2187	-	ENSSLDP00000027680	728 (aa)	-	-
ENSSLDT00000028474	-	5778	XM_023394342	ENSSLDP00000027636	771 (aa)	XP_023250110	UPI000C6FB28D

Gene Model

Click here to download ENSSLDG00000021413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021413's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021413	crnkl1	88	86.558	ENSG00000101343	CRNKL1	99	85.693	Homo_sapiens
ENSSLDG00000021413	crnkl1	100	92.109	ENSAPOG00000009705	crnkl1	99	94.606	Acanthochromis_polyacanthus
ENSSLDG00000021413	crnkl1	87	87.073	ENSAMEG00000000270	CRNKL1	82	87.168	Ailuropoda_melanoleuca
ENSSLDG00000021413	crnkl1	93	90.756	ENSACIG00000015267	crnkl1	96	90.331	Amphilophus_citrinellus
ENSSLDG00000021413	crnkl1	93	94.715	ENSAOCG00000021964	crnkl1	100	90.686	Amphiprion_ocellaris
ENSSLDG00000021413	crnkl1	93	94.715	ENSAPEG00000015041	crnkl1	96	94.628	Amphiprion_percula
ENSSLDG00000021413	crnkl1	100	89.378	ENSATEG00000001068	crnkl1	95	91.448	Anabas_testudineus
ENSSLDG00000021413	crnkl1	86	85.865	ENSAPLG00000013105	CRNKL1	99	84.389	Anas_platyrhynchos
ENSSLDG00000021413	crnkl1	88	88.053	ENSACAG00000005284	CRNKL1	99	88.053	Anolis_carolinensis
ENSSLDG00000021413	crnkl1	82	87.302	ENSANAG00000024889	CRNKL1	99	87.302	Aotus_nancymaae
ENSSLDG00000021413	crnkl1	100	88.015	ENSACLG00000010813	crnkl1	98	90.836	Astatotilapia_calliptera
ENSSLDG00000021413	crnkl1	86	92.632	ENSAMXG00000018334	crnkl1	96	87.258	Astyanax_mexicanus
ENSSLDG00000021413	crnkl1	89	86.087	ENSBTAG00000008472	CRNKL1	99	86.087	Bos_taurus
ENSSLDG00000021413	crnkl1	83	63.919	WBGene00019762	M03F8.3	98	59.345	Caenorhabditis_elegans
ENSSLDG00000021413	crnkl1	88	86.558	ENSCJAG00000005393	CRNKL1	99	85.693	Callithrix_jacchus
ENSSLDG00000021413	crnkl1	87	87.073	ENSCAFG00000005333	CRNKL1	93	87.168	Canis_familiaris
ENSSLDG00000021413	crnkl1	88	87.168	ENSCAFG00020027488	CRNKL1	99	87.168	Canis_lupus_dingo
ENSSLDG00000021413	crnkl1	89	85.217	ENSCHIG00000013171	CRNKL1	99	85.217	Capra_hircus
ENSSLDG00000021413	crnkl1	88	86.431	ENSTSYG00000004197	CRNKL1	99	85.693	Carlito_syrichta
ENSSLDG00000021413	crnkl1	80	84.058	ENSCAPG00000010501	CRNKL1	99	84.058	Cavia_aperea
ENSSLDG00000021413	crnkl1	88	86.431	ENSCPOG00000004418	CRNKL1	99	86.431	Cavia_porcellus
ENSSLDG00000021413	crnkl1	88	86.706	ENSCCAG00000027037	CRNKL1	99	86.706	Cebus_capucinus
ENSSLDG00000021413	crnkl1	88	86.411	ENSCATG00000034247	CRNKL1	99	85.547	Cercocebus_atys
ENSSLDG00000021413	crnkl1	88	86.873	ENSCLAG00000013859	CRNKL1	99	86.873	Chinchilla_lanigera
ENSSLDG00000021413	crnkl1	88	86.411	ENSCSAG00000011434	CRNKL1	99	85.547	Chlorocebus_sabaeus
ENSSLDG00000021413	crnkl1	87	86.330	ENSCHOG00000006371	CRNKL1	83	86.431	Choloepus_hoffmanni
ENSSLDG00000021413	crnkl1	88	87.776	ENSCPBG00000023501	CRNKL1	99	87.776	Chrysemys_picta_bellii
ENSSLDG00000021413	crnkl1	86	69.578	ENSCING00000002709	-	98	69.001	Ciona_intestinalis
ENSSLDG00000021413	crnkl1	88	86.411	ENSCANG00000038789	CRNKL1	99	86.411	Colobus_angolensis_palliatus
ENSSLDG00000021413	crnkl1	89	85.860	ENSCGRG00001000687	-	99	85.860	Cricetulus_griseus_chok1gshd
ENSSLDG00000021413	crnkl1	89	85.860	ENSCGRG00001001115	-	99	85.860	Cricetulus_griseus_chok1gshd
ENSSLDG00000021413	crnkl1	89	85.860	ENSCGRG00000007854	Crnkl1	99	85.860	Cricetulus_griseus_crigri
ENSSLDG00000021413	crnkl1	98	85.967	ENSCSEG00000005594	crnkl1	89	93.050	Cynoglossus_semilaevis
ENSSLDG00000021413	crnkl1	92	90.884	ENSCVAG00000015172	crnkl1	97	89.945	Cyprinodon_variegatus
ENSSLDG00000021413	crnkl1	86	91.704	ENSDARG00000007901	crnkl1	96	86.145	Danio_rerio
ENSSLDG00000021413	crnkl1	88	86.873	ENSDNOG00000016226	CRNKL1	94	86.873	Dasypus_novemcinctus
ENSSLDG00000021413	crnkl1	87	79.583	ENSDORG00000030174	-	99	79.583	Dipodomys_ordii
ENSSLDG00000021413	crnkl1	88	84.795	ENSDORG00000000394	-	99	84.795	Dipodomys_ordii
ENSSLDG00000021413	crnkl1	87	80.419	ENSDORG00000023724	-	99	80.419	Dipodomys_ordii
ENSSLDG00000021413	crnkl1	87	69.037	FBgn0000377	crn	99	67.234	Drosophila_melanogaster
ENSSLDG00000021413	crnkl1	86	76.727	ENSETEG00000003711	CRNKL1	81	76.727	Echinops_telfairi
ENSSLDG00000021413	crnkl1	87	61.711	ENSEBUG00000013461	crnkl1	95	56.973	Eptatretus_burgeri
ENSSLDG00000021413	crnkl1	88	87.168	ENSEASG00005002072	CRNKL1	99	87.168	Equus_asinus_asinus
ENSSLDG00000021413	crnkl1	88	87.168	ENSECAG00000022215	CRNKL1	99	87.168	Equus_caballus
ENSSLDG00000021413	crnkl1	87	84.398	ENSEEUG00000000413	CRNKL1	91	84.513	Erinaceus_europaeus
ENSSLDG00000021413	crnkl1	96	92.054	ENSELUG00000015424	crnkl1	95	91.246	Esox_lucius
ENSSLDG00000021413	crnkl1	88	87.168	ENSFCAG00000000714	CRNKL1	99	87.168	Felis_catus
ENSSLDG00000021413	crnkl1	86	85.714	ENSFALG00000004611	CRNKL1	99	85.714	Ficedula_albicollis
ENSSLDG00000021413	crnkl1	88	87.021	ENSFDAG00000000604	CRNKL1	99	87.021	Fukomys_damarensis
ENSSLDG00000021413	crnkl1	100	85.438	ENSFHEG00000013163	crnkl1	94	89.986	Fundulus_heteroclitus
ENSSLDG00000021413	crnkl1	87	90.269	ENSGMOG00000007609	crnkl1	94	88.646	Gadus_morhua
ENSSLDG00000021413	crnkl1	88	87.187	ENSGALG00000008429	CRNKL1	99	87.187	Gallus_gallus
ENSSLDG00000021413	crnkl1	87	94.328	ENSGAFG00000014249	crnkl1	95	89.698	Gambusia_affinis
ENSSLDG00000021413	crnkl1	91	89.444	ENSGACG00000011852	crnkl1	97	88.583	Gasterosteus_aculeatus
ENSSLDG00000021413	crnkl1	84	86.133	ENSGAGG00000021233	CRNKL1	100	85.366	Gopherus_agassizii
ENSSLDG00000021413	crnkl1	88	86.558	ENSGGOG00000014176	CRNKL1	99	85.693	Gorilla_gorilla
ENSSLDG00000021413	crnkl1	94	91.632	ENSHBUG00000005246	crnkl1	96	91.632	Haplochromis_burtoni
ENSSLDG00000021413	crnkl1	89	86.277	ENSHGLG00000010856	CRNKL1	99	86.277	Heterocephalus_glaber_female
ENSSLDG00000021413	crnkl1	89	86.277	ENSHGLG00100011521	CRNKL1	99	86.277	Heterocephalus_glaber_male
ENSSLDG00000021413	crnkl1	87	91.154	ENSHCOG00000006420	crnkl1	97	90.923	Hippocampus_comes
ENSSLDG00000021413	crnkl1	86	77.526	ENSIPUG00000006836	-	97	77.444	Ictalurus_punctatus
ENSSLDG00000021413	crnkl1	82	71.384	ENSIPUG00000000315	-	99	72.598	Ictalurus_punctatus
ENSSLDG00000021413	crnkl1	89	86.152	ENSIPUG00000006751	crnkl1	95	86.172	Ictalurus_punctatus
ENSSLDG00000021413	crnkl1	88	86.873	ENSSTOG00000014747	CRNKL1	99	86.131	Ictidomys_tridecemlineatus
ENSSLDG00000021413	crnkl1	88	84.726	ENSJJAG00000016926	Crnkl1	99	84.726	Jaculus_jaculus
ENSSLDG00000021413	crnkl1	94	91.551	ENSKMAG00000003620	crnkl1	91	91.298	Kryptolebias_marmoratus
ENSSLDG00000021413	crnkl1	88	77.727	ENSLBEG00000003543	crnkl1	93	77.727	Labrus_bergylta
ENSSLDG00000021413	crnkl1	87	89.153	ENSLACG00000001129	CRNKL1	98	89.153	Latimeria_chalumnae
ENSSLDG00000021413	crnkl1	86	92.782	ENSLOCG00000016889	crnkl1	99	87.815	Lepisosteus_oculatus
ENSSLDG00000021413	crnkl1	88	86.303	ENSLAFG00000004512	CRNKL1	99	86.297	Loxodonta_africana
ENSSLDG00000021413	crnkl1	88	86.411	ENSMFAG00000039893	CRNKL1	99	85.547	Macaca_fascicularis
ENSSLDG00000021413	crnkl1	88	86.411	ENSMMUG00000007709	CRNKL1	99	85.547	Macaca_mulatta
ENSSLDG00000021413	crnkl1	88	86.411	ENSMNEG00000037490	CRNKL1	99	85.547	Macaca_nemestrina
ENSSLDG00000021413	crnkl1	88	86.411	ENSMLEG00000034885	CRNKL1	99	85.547	Mandrillus_leucophaeus
ENSSLDG00000021413	crnkl1	92	92.707	ENSMAMG00000008757	crnkl1	95	91.436	Mastacembelus_armatus
ENSSLDG00000021413	crnkl1	100	88.015	ENSMZEG00005022345	crnkl1	97	91.358	Maylandia_zebra
ENSSLDG00000021413	crnkl1	88	86.471	ENSMGAG00000003452	CRNKL1	93	86.471	Meleagris_gallopavo
ENSSLDG00000021413	crnkl1	89	85.860	ENSMAUG00000020764	Crnkl1	99	85.860	Mesocricetus_auratus
ENSSLDG00000021413	crnkl1	88	86.726	ENSMICG00000006048	CRNKL1	99	86.726	Microcebus_murinus
ENSSLDG00000021413	crnkl1	86	63.102	ENSMOCG00000004179	-	95	63.024	Microtus_ochrogaster
ENSSLDG00000021413	crnkl1	89	77.937	ENSMOCG00000000681	-	99	77.937	Microtus_ochrogaster
ENSSLDG00000021413	crnkl1	82	91.456	ENSMMOG00000017601	crnkl1	97	91.456	Mola_mola
ENSSLDG00000021413	crnkl1	88	80.707	ENSMODG00000010857	-	98	80.707	Monodelphis_domestica
ENSSLDG00000021413	crnkl1	88	84.425	ENSMODG00000005961	-	99	83.718	Monodelphis_domestica
ENSSLDG00000021413	crnkl1	98	62.681	ENSMALG00000011211	crnkl1	95	73.103	Monopterus_albus
ENSSLDG00000021413	crnkl1	89	85.860	MGP_CAROLIEiJ_G0024394	Crnkl1	99	85.860	Mus_caroli
ENSSLDG00000021413	crnkl1	89	85.860	ENSMUSG00000001767	Crnkl1	99	85.860	Mus_musculus
ENSSLDG00000021413	crnkl1	89	84.694	MGP_PahariEiJ_G0025838	Crnkl1	99	84.694	Mus_pahari
ENSSLDG00000021413	crnkl1	89	85.860	MGP_SPRETEiJ_G0025312	Crnkl1	99	85.860	Mus_spretus
ENSSLDG00000021413	crnkl1	88	87.168	ENSMPUG00000001226	CRNKL1	99	87.168	Mustela_putorius_furo
ENSSLDG00000021413	crnkl1	87	86.647	ENSMLUG00000016513	CRNKL1	88	86.745	Myotis_lucifugus
ENSSLDG00000021413	crnkl1	88	84.515	ENSNGAG00000023097	Crnkl1	99	83.811	Nannospalax_galili
ENSSLDG00000021413	crnkl1	93	91.690	ENSNBRG00000007867	crnkl1	96	91.632	Neolamprologus_brichardi
ENSSLDG00000021413	crnkl1	88	83.456	ENSNLEG00000009862	CRNKL1	99	82.628	Nomascus_leucogenys
ENSSLDG00000021413	crnkl1	88	81.711	ENSMEUG00000002361	-	98	81.711	Notamacropus_eugenii
ENSSLDG00000021413	crnkl1	86	87.029	ENSMEUG00000012167	-	100	86.269	Notamacropus_eugenii
ENSSLDG00000021413	crnkl1	76	59.496	ENSOPRG00000009242	-	61	59.496	Ochotona_princeps
ENSSLDG00000021413	crnkl1	88	86.578	ENSODEG00000012175	CRNKL1	99	86.578	Octodon_degus
ENSSLDG00000021413	crnkl1	93	91.967	ENSONIG00000018728	crnkl1	96	91.907	Oreochromis_niloticus
ENSSLDG00000021413	crnkl1	87	85.778	ENSOCUG00000015484	CRNKL1	82	86.471	Oryctolagus_cuniculus
ENSSLDG00000021413	crnkl1	93	89.136	ENSORLG00000017240	crnkl1	97	88.966	Oryzias_latipes
ENSSLDG00000021413	crnkl1	93	89.121	ENSORLG00020001742	crnkl1	96	87.912	Oryzias_latipes_hni
ENSSLDG00000021413	crnkl1	93	89.028	ENSORLG00015019564	crnkl1	97	88.858	Oryzias_latipes_hsok
ENSSLDG00000021413	crnkl1	93	90.390	ENSOMEG00000019895	crnkl1	97	88.299	Oryzias_melastigma
ENSSLDG00000021413	crnkl1	89	85.985	ENSOGAG00000011544	CRNKL1	99	85.985	Otolemur_garnettii
ENSSLDG00000021413	crnkl1	89	86.131	ENSOARG00000002150	CRNKL1	90	86.232	Ovis_aries
ENSSLDG00000021413	crnkl1	87	85.417	ENSPPAG00000027847	CRNKL1	82	85.524	Pan_paniscus
ENSSLDG00000021413	crnkl1	88	87.168	ENSPPRG00000001955	CRNKL1	99	87.168	Panthera_pardus
ENSSLDG00000021413	crnkl1	88	87.168	ENSPTIG00000007393	CRNKL1	99	87.168	Panthera_tigris_altaica
ENSSLDG00000021413	crnkl1	88	86.558	ENSPTRG00000030609	CRNKL1	99	85.693	Pan_troglodytes
ENSSLDG00000021413	crnkl1	88	86.411	ENSPANG00000017420	CRNKL1	99	85.547	Papio_anubis
ENSSLDG00000021413	crnkl1	86	86.787	ENSPKIG00000017093	crnkl1	95	80.874	Paramormyrops_kingsleyae
ENSSLDG00000021413	crnkl1	88	86.538	ENSPSIG00000012705	CRNKL1	98	86.538	Pelodiscus_sinensis
ENSSLDG00000021413	crnkl1	88	84.875	ENSPMGG00000006263	crnkl1	97	83.671	Periophthalmus_magnuspinnatus
ENSSLDG00000021413	crnkl1	89	86.152	ENSPEMG00000000073	-	99	86.152	Peromyscus_maniculatus_bairdii
ENSSLDG00000021413	crnkl1	87	82.934	ENSPMAG00000002250	crnkl1	97	82.934	Petromyzon_marinus
ENSSLDG00000021413	crnkl1	88	86.726	ENSPCIG00000025825	CRNKL1	95	86.726	Phascolarctos_cinereus
ENSSLDG00000021413	crnkl1	87	94.179	ENSPFOG00000005102	crnkl1	97	89.409	Poecilia_formosa
ENSSLDG00000021413	crnkl1	87	94.179	ENSPLAG00000007288	crnkl1	94	89.641	Poecilia_latipinna
ENSSLDG00000021413	crnkl1	87	94.328	ENSPMEG00000008865	crnkl1	98	89.546	Poecilia_mexicana
ENSSLDG00000021413	crnkl1	96	90.719	ENSPREG00000012615	crnkl1	97	89.271	Poecilia_reticulata
ENSSLDG00000021413	crnkl1	87	86.310	ENSPPYG00000010747	CRNKL1	80	86.411	Pongo_abelii
ENSSLDG00000021413	crnkl1	81	89.417	ENSPCAG00000003296	CRNKL1	85	81.606	Procavia_capensis
ENSSLDG00000021413	crnkl1	87	85.438	ENSPCOG00000017608	CRNKL1	82	85.546	Propithecus_coquereli
ENSSLDG00000021413	crnkl1	87	87.073	ENSPVAG00000006207	CRNKL1	82	87.168	Pteropus_vampyrus
ENSSLDG00000021413	crnkl1	95	90.000	ENSPNYG00000001977	crnkl1	96	91.495	Pundamilia_nyererei
ENSSLDG00000021413	crnkl1	92	88.293	ENSPNAG00000001507	crnkl1	99	86.686	Pygocentrus_nattereri
ENSSLDG00000021413	crnkl1	89	85.714	ENSRNOG00000040045	Crnkl1	99	85.714	Rattus_norvegicus
ENSSLDG00000021413	crnkl1	89	85.860	ENSRNOG00000010587	Crnkl1	99	85.860	Rattus_norvegicus
ENSSLDG00000021413	crnkl1	89	85.547	ENSRBIG00000031770	CRNKL1	99	85.547	Rhinopithecus_bieti
ENSSLDG00000021413	crnkl1	89	85.693	ENSRROG00000040450	CRNKL1	99	85.693	Rhinopithecus_roxellana
ENSSLDG00000021413	crnkl1	84	37.192	YLR117C	CLF1	99	37.192	Saccharomyces_cerevisiae
ENSSLDG00000021413	crnkl1	88	86.558	ENSSBOG00000029672	CRNKL1	99	86.558	Saimiri_boliviensis_boliviensis
ENSSLDG00000021413	crnkl1	85	70.928	ENSSHAG00000011199	CRNKL1	99	70.928	Sarcophilus_harrisii
ENSSLDG00000021413	crnkl1	86	91.403	ENSSFOG00015000946	crnkl1	94	85.221	Scleropages_formosus
ENSSLDG00000021413	crnkl1	93	90.301	ENSSMAG00000007933	crnkl1	96	89.986	Scophthalmus_maximus
ENSSLDG00000021413	crnkl1	91	94.083	ENSSDUG00000012625	crnkl1	93	94.236	Seriola_dumerili
ENSSLDG00000021413	crnkl1	88	86.136	ENSSARG00000006443	CRNKL1	81	86.136	Sorex_araneus
ENSSLDG00000021413	crnkl1	92	84.583	ENSSPUG00000005254	CRNKL1	99	87.334	Sphenodon_punctatus
ENSSLDG00000021413	crnkl1	93	94.019	ENSSPAG00000016150	crnkl1	93	94.061	Stegastes_partitus
ENSSLDG00000021413	crnkl1	89	85.962	ENSSSCG00000038587	CRNKL1	99	85.962	Sus_scrofa
ENSSLDG00000021413	crnkl1	88	86.324	ENSTGUG00000007645	CRNKL1	97	86.324	Taeniopygia_guttata
ENSSLDG00000021413	crnkl1	99	79.423	ENSTRUG00000015417	crnkl1	98	80.965	Takifugu_rubripes
ENSSLDG00000021413	crnkl1	87	90.269	ENSTNIG00000010710	crnkl1	99	88.630	Tetraodon_nigroviridis
ENSSLDG00000021413	crnkl1	81	85.600	ENSTBEG00000001304	CRNKL1	82	85.714	Tupaia_belangeri
ENSSLDG00000021413	crnkl1	81	83.200	ENSTTRG00000000484	CRNKL1	81	83.333	Tursiops_truncatus
ENSSLDG00000021413	crnkl1	88	87.168	ENSUAMG00000018586	CRNKL1	99	87.168	Ursus_americanus
ENSSLDG00000021413	crnkl1	88	87.168	ENSUMAG00000024957	CRNKL1	99	87.168	Ursus_maritimus
ENSSLDG00000021413	crnkl1	87	87.073	ENSVVUG00000012559	CRNKL1	81	87.168	Vulpes_vulpes
ENSSLDG00000021413	crnkl1	89	86.026	ENSXETG00000009698	crnkl1	99	86.026	Xenopus_tropicalis
ENSSLDG00000021413	crnkl1	87	93.145	ENSXCOG00000000824	crnkl1	97	87.772	Xiphophorus_couchianus
ENSSLDG00000021413	crnkl1	87	94.328	ENSXMAG00000006896	crnkl1	97	88.707	Xiphophorus_maculatus