EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000021438 (Gene tree)
Gene ID: -
Gene Symbol: cpeb3
Alias: si:ch211-129m12.2
Full Name: cytoplasmic polyadenylation element-binding protein 3-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 39104 bases
Position: chrPEQF01099274.1:3356357-3395460
Accession: 111669519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000027700	RRM_1	PF00076.22	1.6e-10	1	1
ENSSLDP00000027669	RRM_1	PF00076.22	1.9e-10	1	1
ENSSLDP00000027635	RRM_1	PF00076.22	2e-10	1	1
ENSSLDP00000027645	RRM_1	PF00076.22	2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000028483	-	2735	XM_023425850	ENSSLDP00000027645	696 (aa)	XP_023281618	UPI000C6FB0E0
ENSSLDT00000028508	-	2711	XM_023425852	ENSSLDP00000027669	688 (aa)	XP_023281620	-
ENSSLDT00000028539	-	1935	XM_023425855	ENSSLDP00000027700	644 (aa)	XP_023281623	-
ENSSLDT00000028473	-	2202	XM_023425853	ENSSLDP00000027635	696 (aa)	XP_023281621	UPI000C6FB0E0

Gene Model

Click here to download ENSSLDG00000021438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000021438	cpeb3	83	67.754	ENSSLDG00000013451	cpeb2	69	66.786
ENSSLDG00000021438	cpeb3	52	81.579	ENSSLDG00000003652	cpeb4a	100	81.579
ENSSLDG00000021438	cpeb3	65	76.168	ENSSLDG00000006601	CPEB4	81	62.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021438	cpeb3	100	73.988	ENSG00000107864	CPEB3	100	74.746	Homo_sapiens
ENSSLDG00000021438	cpeb3	100	95.415	ENSAPOG00000003625	cpeb3	100	95.415	Acanthochromis_polyacanthus
ENSSLDG00000021438	cpeb3	100	72.006	ENSAMEG00000014204	CPEB3	100	71.569	Ailuropoda_melanoleuca
ENSSLDG00000021438	cpeb3	100	94.842	ENSACIG00000001933	cpeb3	100	94.842	Amphilophus_citrinellus
ENSSLDG00000021438	cpeb3	100	98.142	ENSAOCG00000015423	cpeb3	100	98.142	Amphiprion_ocellaris
ENSSLDG00000021438	cpeb3	100	97.531	ENSATEG00000010649	cpeb3	100	97.531	Anabas_testudineus
ENSSLDG00000021438	cpeb3	100	79.037	ENSACAG00000006335	CPEB3	100	78.470	Anolis_carolinensis
ENSSLDG00000021438	cpeb3	100	73.505	ENSANAG00000037406	CPEB3	100	73.234	Aotus_nancymaae
ENSSLDG00000021438	cpeb3	100	95.666	ENSACLG00000018590	cpeb3	89	95.666	Astatotilapia_calliptera
ENSSLDG00000021438	cpeb3	100	74.245	ENSBTAG00000015450	CPEB3	94	94.040	Bos_taurus
ENSSLDG00000021438	cpeb3	100	74.658	ENSCJAG00000008495	CPEB3	100	74.110	Callithrix_jacchus
ENSSLDG00000021438	cpeb3	100	74.170	ENSCAFG00000007423	CPEB3	100	74.419	Canis_familiaris
ENSSLDG00000021438	cpeb3	100	73.161	ENSCAFG00020001981	CPEB3	92	93.791	Canis_lupus_dingo
ENSSLDG00000021438	cpeb3	100	74.247	ENSCHIG00000017337	CPEB3	100	73.836	Capra_hircus
ENSSLDG00000021438	cpeb3	82	87.529	ENSTSYG00000003928	CPEB3	82	87.529	Carlito_syrichta
ENSSLDG00000021438	cpeb3	100	73.913	ENSCCAG00000033267	CPEB3	100	73.806	Cebus_capucinus
ENSSLDG00000021438	cpeb3	100	74.216	ENSCATG00000038447	CPEB3	100	74.026	Cercocebus_atys
ENSSLDG00000021438	cpeb3	68	87.872	ENSCLAG00000011817	CPEB3	95	87.872	Chinchilla_lanigera
ENSSLDG00000021438	cpeb3	100	74.026	ENSCSAG00000006579	CPEB3	100	74.711	Chlorocebus_sabaeus
ENSSLDG00000021438	cpeb3	54	79.301	ENSCHOG00000000272	-	100	79.301	Choloepus_hoffmanni
ENSSLDG00000021438	cpeb3	100	80.995	ENSCPBG00000023779	CPEB3	100	80.273	Chrysemys_picta_bellii
ENSSLDG00000021438	cpeb3	100	74.114	ENSCANG00000040306	CPEB3	100	74.964	Colobus_angolensis_palliatus
ENSSLDG00000021438	cpeb3	100	74.384	ENSCGRG00001003846	Cpeb3	100	73.699	Cricetulus_griseus_chok1gshd
ENSSLDG00000021438	cpeb3	60	89.398	ENSCGRG00000002839	Cpeb3	100	89.398	Cricetulus_griseus_crigri
ENSSLDG00000021438	cpeb3	90	86.667	ENSCSEG00000008423	cpeb3	100	86.179	Cynoglossus_semilaevis
ENSSLDG00000021438	cpeb3	100	86.399	ENSCVAG00000005998	cpeb3	100	85.935	Cyprinodon_variegatus
ENSSLDG00000021438	cpeb3	100	73.364	ENSDARG00000060103	cpeb3	100	72.603	Danio_rerio
ENSSLDG00000021438	cpeb3	100	69.379	ENSDNOG00000048639	CPEB3	100	68.932	Dasypus_novemcinctus
ENSSLDG00000021438	cpeb3	91	89.038	ENSDORG00000028940	Cpeb3	87	89.038	Dipodomys_ordii
ENSSLDG00000021438	cpeb3	100	69.071	ENSETEG00000000111	CPEB3	100	68.201	Echinops_telfairi
ENSSLDG00000021438	cpeb3	91	65.379	ENSEBUG00000010745	cpeb3	90	60.244	Eptatretus_burgeri
ENSSLDG00000021438	cpeb3	100	74.150	ENSEASG00005011095	CPEB3	100	73.187	Equus_asinus_asinus
ENSSLDG00000021438	cpeb3	100	74.251	ENSECAG00000000077	CPEB3	100	73.836	Equus_caballus
ENSSLDG00000021438	cpeb3	100	87.003	ENSELUG00000019251	cpeb3	100	86.544	Esox_lucius
ENSSLDG00000021438	cpeb3	100	74.277	ENSFCAG00000032380	CPEB3	100	75.109	Felis_catus
ENSSLDG00000021438	cpeb3	100	80.303	ENSFALG00000007952	CPEB3	87	80.606	Ficedula_albicollis
ENSSLDG00000021438	cpeb3	83	89.838	ENSFDAG00000016459	CPEB3	84	89.838	Fukomys_damarensis
ENSSLDG00000021438	cpeb3	100	87.328	ENSFHEG00000021371	cpeb3	100	84.659	Fundulus_heteroclitus
ENSSLDG00000021438	cpeb3	89	84.912	ENSGMOG00000008307	cpeb3	99	82.890	Gadus_morhua
ENSSLDG00000021438	cpeb3	100	79.119	ENSGALG00000006912	CPEB3	100	78.815	Gallus_gallus
ENSSLDG00000021438	cpeb3	99	89.143	ENSGACG00000002944	cpeb3	99	89.286	Gasterosteus_aculeatus
ENSSLDG00000021438	cpeb3	100	81.089	ENSGAGG00000008528	CPEB3	100	79.970	Gopherus_agassizii
ENSSLDG00000021438	cpeb3	100	74.317	ENSGGOG00000016441	CPEB3	100	73.937	Gorilla_gorilla
ENSSLDG00000021438	cpeb3	100	93.266	ENSHBUG00000004097	cpeb3	93	93.266	Haplochromis_burtoni
ENSSLDG00000021438	cpeb3	100	73.314	ENSHGLG00000014022	CPEB3	100	73.737	Heterocephalus_glaber_female
ENSSLDG00000021438	cpeb3	100	71.053	ENSHGLG00100005200	CPEB3	92	87.657	Heterocephalus_glaber_male
ENSSLDG00000021438	cpeb3	100	82.496	ENSHCOG00000005747	cpeb3	100	83.238	Hippocampus_comes
ENSSLDG00000021438	cpeb3	100	81.027	ENSIPUG00000018571	cpeb3	100	80.085	Ictalurus_punctatus
ENSSLDG00000021438	cpeb3	100	75.559	ENSSTOG00000028061	CPEB3	100	74.581	Ictidomys_tridecemlineatus
ENSSLDG00000021438	cpeb3	60	89.639	ENSJJAG00000009135	Cpeb3	100	89.639	Jaculus_jaculus
ENSSLDG00000021438	cpeb3	100	94.540	ENSLBEG00000025961	cpeb3	100	94.540	Labrus_bergylta
ENSSLDG00000021438	cpeb3	100	79.116	ENSLACG00000011307	CPEB3	92	78.659	Latimeria_chalumnae
ENSSLDG00000021438	cpeb3	100	85.410	ENSLOCG00000007131	cpeb3	100	81.563	Lepisosteus_oculatus
ENSSLDG00000021438	cpeb3	100	74.579	ENSLAFG00000018716	CPEB3	94	87.253	Loxodonta_africana
ENSSLDG00000021438	cpeb3	89	86.383	ENSMFAG00000025613	CPEB3	91	86.383	Macaca_fascicularis
ENSSLDG00000021438	cpeb3	100	74.692	ENSMMUG00000015050	CPEB3	100	75.109	Macaca_mulatta
ENSSLDG00000021438	cpeb3	100	74.114	ENSMNEG00000045465	CPEB3	100	73.919	Macaca_nemestrina
ENSSLDG00000021438	cpeb3	90	83.529	ENSMLEG00000031794	CPEB3	97	87.529	Mandrillus_leucophaeus
ENSSLDG00000021438	cpeb3	100	95.422	ENSMAMG00000012794	cpeb3	100	95.369	Mastacembelus_armatus
ENSSLDG00000021438	cpeb3	100	93.266	ENSMZEG00005012068	cpeb3	100	93.266	Maylandia_zebra
ENSSLDG00000021438	cpeb3	100	80.455	ENSMGAG00000009148	CPEB3	99	80.152	Meleagris_gallopavo
ENSSLDG00000021438	cpeb3	100	74.207	ENSMAUG00000002789	Cpeb3	100	74.315	Mesocricetus_auratus
ENSSLDG00000021438	cpeb3	100	74.451	ENSMICG00000026866	CPEB3	100	74.038	Microcebus_murinus
ENSSLDG00000021438	cpeb3	100	74.216	ENSMOCG00000016486	Cpeb3	100	73.670	Microtus_ochrogaster
ENSSLDG00000021438	cpeb3	96	94.099	ENSMMOG00000008209	cpeb3	88	94.418	Mola_mola
ENSSLDG00000021438	cpeb3	100	71.930	ENSMODG00000006673	CPEB3	100	71.528	Monodelphis_domestica
ENSSLDG00000021438	cpeb3	100	92.879	ENSMALG00000009305	cpeb3	95	99.666	Monopterus_albus
ENSSLDG00000021438	cpeb3	100	74.352	MGP_CAROLIEiJ_G0022910	Cpeb3	100	89.639	Mus_caroli
ENSSLDG00000021438	cpeb3	100	74.638	ENSMUSG00000039652	Cpeb3	100	89.639	Mus_musculus
ENSSLDG00000021438	cpeb3	100	74.170	MGP_PahariEiJ_G0014405	Cpeb3	100	89.639	Mus_pahari
ENSSLDG00000021438	cpeb3	100	74.315	MGP_SPRETEiJ_G0023829	Cpeb3	100	89.639	Mus_spretus
ENSSLDG00000021438	cpeb3	100	73.181	ENSMPUG00000017227	CPEB3	100	73.994	Mustela_putorius_furo
ENSSLDG00000021438	cpeb3	100	74.038	ENSNGAG00000015621	Cpeb3	100	73.764	Nannospalax_galili
ENSSLDG00000021438	cpeb3	100	94.632	ENSNBRG00000018343	cpeb3	91	94.632	Neolamprologus_brichardi
ENSSLDG00000021438	cpeb3	100	74.658	ENSNLEG00000012600	CPEB3	100	75.072	Nomascus_leucogenys
ENSSLDG00000021438	cpeb3	77	82.920	ENSMEUG00000009948	-	75	84.409	Notamacropus_eugenii
ENSSLDG00000021438	cpeb3	100	72.289	ENSODEG00000004591	CPEB3	100	71.237	Octodon_degus
ENSSLDG00000021438	cpeb3	50	91.437	ENSOANG00000015723	-	100	93.636	Ornithorhynchus_anatinus
ENSSLDG00000021438	cpeb3	100	73.907	ENSOCUG00000010454	CPEB3	100	73.077	Oryctolagus_cuniculus
ENSSLDG00000021438	cpeb3	100	85.139	ENSORLG00000000726	cpeb3	100	87.152	Oryzias_latipes
ENSSLDG00000021438	cpeb3	100	84.783	ENSORLG00020004475	cpeb3	100	87.422	Oryzias_latipes_hni
ENSSLDG00000021438	cpeb3	100	85.248	ENSORLG00015011683	cpeb3	100	87.888	Oryzias_latipes_hsok
ENSSLDG00000021438	cpeb3	100	85.559	ENSOMEG00000018265	cpeb3	92	86.180	Oryzias_melastigma
ENSSLDG00000021438	cpeb3	100	74.063	ENSOGAG00000002002	CPEB3	100	73.913	Otolemur_garnettii
ENSSLDG00000021438	cpeb3	100	75.109	ENSOARG00000016671	CPEB3	100	74.964	Ovis_aries
ENSSLDG00000021438	cpeb3	68	86.170	ENSPPAG00000031528	CPEB3	91	86.170	Pan_paniscus
ENSSLDG00000021438	cpeb3	100	74.277	ENSPPRG00000015654	CPEB3	100	75.109	Panthera_pardus
ENSSLDG00000021438	cpeb3	65	87.500	ENSPTIG00000012018	CPEB3	97	95.172	Panthera_tigris_altaica
ENSSLDG00000021438	cpeb3	100	74.317	ENSPTRG00000002753	CPEB3	100	73.562	Pan_troglodytes
ENSSLDG00000021438	cpeb3	100	73.370	ENSPANG00000021561	CPEB3	100	72.245	Papio_anubis
ENSSLDG00000021438	cpeb3	100	88.702	ENSPKIG00000015878	cpeb3	100	87.786	Paramormyrops_kingsleyae
ENSSLDG00000021438	cpeb3	100	76.758	ENSPMGG00000022722	cpeb3	100	76.336	Periophthalmus_magnuspinnatus
ENSSLDG00000021438	cpeb3	100	74.566	ENSPEMG00000008448	Cpeb3	100	74.530	Peromyscus_maniculatus_bairdii
ENSSLDG00000021438	cpeb3	100	74.150	ENSPCIG00000017302	CPEB3	100	74.422	Phascolarctos_cinereus
ENSSLDG00000021438	cpeb3	100	83.714	ENSPFOG00000011231	cpeb3	100	86.149	Poecilia_formosa
ENSSLDG00000021438	cpeb3	100	88.092	ENSPLAG00000002852	cpeb3	100	88.379	Poecilia_latipinna
ENSSLDG00000021438	cpeb3	100	87.374	ENSPMEG00000021572	cpeb3	100	87.948	Poecilia_mexicana
ENSSLDG00000021438	cpeb3	100	87.948	ENSPREG00000003085	cpeb3	100	88.235	Poecilia_reticulata
ENSSLDG00000021438	cpeb3	100	70.622	ENSPPYG00000002481	CPEB3	100	71.907	Pongo_abelii
ENSSLDG00000021438	cpeb3	100	68.132	ENSPCAG00000012417	CPEB3	100	67.445	Procavia_capensis
ENSSLDG00000021438	cpeb3	100	73.836	ENSPCOG00000023690	CPEB3	100	73.517	Propithecus_coquereli
ENSSLDG00000021438	cpeb3	82	88.172	ENSPVAG00000007664	CPEB3	74	88.172	Pteropus_vampyrus
ENSSLDG00000021438	cpeb3	100	93.266	ENSPNYG00000005300	cpeb3	100	93.266	Pundamilia_nyererei
ENSSLDG00000021438	cpeb3	100	83.926	ENSPNAG00000012111	cpeb3	100	81.935	Pygocentrus_nattereri
ENSSLDG00000021438	cpeb3	100	71.888	ENSRNOG00000020689	Cpeb3	94	71.429	Rattus_norvegicus
ENSSLDG00000021438	cpeb3	100	74.760	ENSRBIG00000041079	CPEB3	100	74.074	Rhinopithecus_bieti
ENSSLDG00000021438	cpeb3	100	74.760	ENSRROG00000031558	CPEB3	100	75.181	Rhinopithecus_roxellana
ENSSLDG00000021438	cpeb3	66	88.525	ENSSBOG00000035843	CPEB3	100	88.525	Saimiri_boliviensis_boliviensis
ENSSLDG00000021438	cpeb3	63	77.751	ENSSFOG00015018275	-	99	77.833	Scleropages_formosus
ENSSLDG00000021438	cpeb3	100	81.818	ENSSFOG00015004974	cpeb3	100	80.909	Scleropages_formosus
ENSSLDG00000021438	cpeb3	100	95.084	ENSSMAG00000013924	cpeb3	100	95.084	Scophthalmus_maximus
ENSSLDG00000021438	cpeb3	100	97.724	ENSSDUG00000019766	cpeb3	100	97.724	Seriola_dumerili
ENSSLDG00000021438	cpeb3	54	88.710	ENSSARG00000001994	CPEB3	100	88.710	Sorex_araneus
ENSSLDG00000021438	cpeb3	100	97.568	ENSSPAG00000004725	cpeb3	100	97.568	Stegastes_partitus
ENSSLDG00000021438	cpeb3	100	73.994	ENSSSCG00000010468	CPEB3	100	73.669	Sus_scrofa
ENSSLDG00000021438	cpeb3	100	79.374	ENSTGUG00000008988	CPEB3	100	78.521	Taeniopygia_guttata
ENSSLDG00000021438	cpeb3	61	80.471	ENSTBEG00000013125	-	60	80.471	Tupaia_belangeri
ENSSLDG00000021438	cpeb3	100	70.596	ENSTTRG00000012334	CPEB3	100	69.903	Tursiops_truncatus
ENSSLDG00000021438	cpeb3	100	72.490	ENSUAMG00000010827	CPEB3	90	89.256	Ursus_americanus
ENSSLDG00000021438	cpeb3	100	74.170	ENSVVUG00000021375	CPEB3	100	74.419	Vulpes_vulpes
ENSSLDG00000021438	cpeb3	100	74.096	ENSXETG00000012190	cpeb3	98	74.510	Xenopus_tropicalis
ENSSLDG00000021438	cpeb3	100	87.902	ENSXCOG00000006122	cpeb3	100	88.974	Xiphophorus_couchianus
ENSSLDG00000021438	cpeb3	100	86.677	ENSXMAG00000007652	cpeb3	94	98.630	Xiphophorus_maculatus