EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000021625 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 4611 bases
Position: chrPEQF01099447.1:64998-69608
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000027894	MMR_HSR1	PF01926.23	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000028734	-	1683	-	ENSSLDP00000027894	560 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000021625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000021625	-	94	34.608	ENSSLDG00000022182	-	96	34.608
ENSSLDG00000021625	-	91	33.205	ENSSLDG00000007742	-	92	33.205
ENSSLDG00000021625	-	86	34.216	ENSSLDG00000011771	-	88	34.216
ENSSLDG00000021625	-	84	32.712	ENSSLDG00000013854	-	88	32.712

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021625	-	95	59.287	ENSAPOG00000015784	-	88	58.955	Acanthochromis_polyacanthus
ENSSLDG00000021625	-	88	61.663	ENSAPOG00000015792	-	87	61.663	Acanthochromis_polyacanthus
ENSSLDG00000021625	-	97	71.429	ENSACIG00000009923	-	88	71.429	Amphilophus_citrinellus
ENSSLDG00000021625	-	93	72.031	ENSACIG00000022228	-	88	72.031	Amphilophus_citrinellus
ENSSLDG00000021625	-	94	68.182	ENSAOCG00000015171	-	50	68.182	Amphiprion_ocellaris
ENSSLDG00000021625	-	95	67.228	ENSAPEG00000005793	-	100	67.228	Amphiprion_percula
ENSSLDG00000021625	-	94	74.194	ENSATEG00000009097	-	89	74.194	Anabas_testudineus
ENSSLDG00000021625	-	93	74.713	ENSACLG00000023474	-	95	74.857	Astatotilapia_calliptera
ENSSLDG00000021625	-	92	75.097	ENSACLG00000023481	-	93	75.097	Astatotilapia_calliptera
ENSSLDG00000021625	-	94	61.027	ENSCVAG00000018327	-	89	61.027	Cyprinodon_variegatus
ENSSLDG00000021625	-	94	58.790	ENSFHEG00000011074	-	82	58.790	Fundulus_heteroclitus
ENSSLDG00000021625	-	94	58.745	ENSFHEG00000008149	-	80	58.745	Fundulus_heteroclitus
ENSSLDG00000021625	-	95	68.284	ENSFHEG00000021969	-	97	68.284	Fundulus_heteroclitus
ENSSLDG00000021625	-	93	73.435	ENSHBUG00000012995	-	94	73.624	Haplochromis_burtoni
ENSSLDG00000021625	-	93	73.563	ENSHBUG00000021307	-	94	73.563	Haplochromis_burtoni
ENSSLDG00000021625	-	95	70.577	ENSKMAG00000016903	-	72	70.577	Kryptolebias_marmoratus
ENSSLDG00000021625	-	94	63.378	ENSKMAG00000016981	-	84	63.378	Kryptolebias_marmoratus
ENSSLDG00000021625	-	91	46.979	ENSLACG00000008367	-	99	46.979	Latimeria_chalumnae
ENSSLDG00000021625	-	95	70.019	ENSMAMG00000015097	-	96	70.019	Mastacembelus_armatus
ENSSLDG00000021625	-	95	71.322	ENSMAMG00000015216	-	96	71.322	Mastacembelus_armatus
ENSSLDG00000021625	-	95	72.439	ENSMAMG00000015247	-	96	72.439	Mastacembelus_armatus
ENSSLDG00000021625	-	93	73.654	ENSMZEG00005020281	-	90	72.067	Maylandia_zebra
ENSSLDG00000021625	-	93	74.330	ENSMZEG00005020274	-	94	74.713	Maylandia_zebra
ENSSLDG00000021625	-	92	73.714	ENSNBRG00000016799	-	92	73.905	Neolamprologus_brichardi
ENSSLDG00000021625	-	88	77.980	ENSNBRG00000016760	-	98	78.182	Neolamprologus_brichardi
ENSSLDG00000021625	-	89	76.647	ENSNBRG00000022932	-	90	76.647	Neolamprologus_brichardi
ENSSLDG00000021625	-	86	77.593	ENSONIG00000012363	-	98	77.593	Oreochromis_niloticus
ENSSLDG00000021625	-	92	62.428	ENSPKIG00000009271	-	86	62.428	Paramormyrops_kingsleyae
ENSSLDG00000021625	-	92	59.381	ENSPKIG00000011996	-	90	59.574	Paramormyrops_kingsleyae
ENSSLDG00000021625	-	67	70.270	ENSPMGG00000000605	-	78	70.270	Periophthalmus_magnuspinnatus
ENSSLDG00000021625	-	93	67.681	ENSPFOG00000010758	-	82	67.681	Poecilia_formosa
ENSSLDG00000021625	-	90	58.020	ENSPLAG00000005002	-	98	58.020	Poecilia_latipinna
ENSSLDG00000021625	-	93	67.297	ENSPLAG00000010093	-	69	67.297	Poecilia_latipinna
ENSSLDG00000021625	-	94	59.696	ENSPLAG00000000406	-	97	59.696	Poecilia_latipinna
ENSSLDG00000021625	-	94	59.696	ENSPMEG00000014712	-	80	59.696	Poecilia_mexicana
ENSSLDG00000021625	-	92	66.859	ENSPREG00000021204	-	96	66.859	Poecilia_reticulata
ENSSLDG00000021625	-	96	78.108	ENSSMAG00000004663	-	89	77.007	Scophthalmus_maximus
ENSSLDG00000021625	-	90	87.327	ENSSDUG00000004257	-	92	87.327	Seriola_dumerili
ENSSLDG00000021625	-	95	71.082	ENSSPAG00000003320	-	91	71.828	Stegastes_partitus
ENSSLDG00000021625	-	90	60.317	ENSXMAG00000023457	-	96	60.317	Xiphophorus_maculatus
ENSSLDG00000021625	-	94	59.886	ENSXMAG00000022709	-	80	59.886	Xiphophorus_maculatus