EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000021671 (Gene tree)
Gene ID: -
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 11476 bases
Position: chrPEQF01098423.1:279644-291119
Accession: 111652334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000027968	RRM_1	PF00076.22	7.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000028807	-	6050	XM_023402573	ENSSLDP00000027968	1146 (aa)	XP_023258341	UPI000C6F67E1

Gene Model

Click here to download ENSSLDG00000021671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021671's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021671	scaf4a	100	84.830	ENSAPOG00000002946	scaf4a	100	85.353	Acanthochromis_polyacanthus
ENSSLDG00000021671	scaf4a	100	85.864	ENSAOCG00000000615	scaf4a	100	86.475	Amphiprion_ocellaris
ENSSLDG00000021671	scaf4a	100	85.253	ENSAPEG00000021229	scaf4a	100	85.777	Amphiprion_percula
ENSSLDG00000021671	scaf4a	58	48.665	ENSATEG00000011758	scaf4b	99	41.731	Anabas_testudineus
ENSSLDG00000021671	scaf4a	83	58.533	ENSAPLG00000002509	SCAF4	85	51.049	Anas_platyrhynchos
ENSSLDG00000021671	scaf4a	53	61.062	ENSACAG00000002569	SCAF4	72	52.500	Anolis_carolinensis
ENSSLDG00000021671	scaf4a	99	50.969	ENSAMXG00000008585	scaf4a	83	58.707	Astyanax_mexicanus
ENSSLDG00000021671	scaf4a	54	59.431	ENSCJAG00000008993	SCAF4	90	58.398	Callithrix_jacchus
ENSSLDG00000021671	scaf4a	82	60.064	ENSCAFG00020026019	SCAF4	68	61.921	Canis_lupus_dingo
ENSSLDG00000021671	scaf4a	53	61.164	ENSCCAG00000033727	SCAF4	82	52.857	Cebus_capucinus
ENSSLDG00000021671	scaf4a	100	75.515	ENSCSEG00000019549	scaf4a	99	74.957	Cynoglossus_semilaevis
ENSSLDG00000021671	scaf4a	83	56.566	ENSDARG00000077093	scaf4a	79	56.941	Danio_rerio
ENSSLDG00000021671	scaf4a	79	80.000	ENSELUG00000009909	scaf4a	93	80.000	Esox_lucius
ENSSLDG00000021671	scaf4a	64	79.597	ENSFHEG00000017866	scaf4a	90	79.576	Fundulus_heteroclitus
ENSSLDG00000021671	scaf4a	64	64.980	ENSGMOG00000015188	scaf4a	80	63.722	Gadus_morhua
ENSSLDG00000021671	scaf4a	57	59.590	ENSGALG00000033965	SCAF4	85	52.390	Gallus_gallus
ENSSLDG00000021671	scaf4a	64	81.696	ENSGAFG00000019460	scaf4a	83	80.978	Gambusia_affinis
ENSSLDG00000021671	scaf4a	73	80.396	ENSGACG00000020580	scaf4a	85	79.341	Gasterosteus_aculeatus
ENSSLDG00000021671	scaf4a	100	82.485	ENSHBUG00000007920	scaf4a	100	81.191	Haplochromis_burtoni
ENSSLDG00000021671	scaf4a	64	59.341	ENSKMAG00000005742	scaf4b	52	71.831	Kryptolebias_marmoratus
ENSSLDG00000021671	scaf4a	98	79.733	ENSLBEG00000014675	scaf4a	100	80.267	Labrus_bergylta
ENSSLDG00000021671	scaf4a	88	52.243	ENSLOCG00000009162	scaf4a	85	57.288	Lepisosteus_oculatus
ENSSLDG00000021671	scaf4a	75	83.812	ENSMAMG00000013223	scaf4a	100	81.430	Mastacembelus_armatus
ENSSLDG00000021671	scaf4a	99	81.636	ENSMZEG00005024349	scaf4a	100	81.239	Maylandia_zebra
ENSSLDG00000021671	scaf4a	57	58.226	ENSMGAG00000014515	SCAF4	85	51.859	Meleagris_gallopavo
ENSSLDG00000021671	scaf4a	100	82.545	ENSONIG00000004687	scaf4a	100	81.857	Oreochromis_niloticus
ENSSLDG00000021671	scaf4a	100	70.672	ENSORLG00000004384	scaf4a	100	72.582	Oryzias_latipes
ENSSLDG00000021671	scaf4a	100	69.076	ENSORLG00020011857	scaf4a	100	71.320	Oryzias_latipes_hni
ENSSLDG00000021671	scaf4a	100	71.235	ENSORLG00015017880	scaf4a	100	73.243	Oryzias_latipes_hsok
ENSSLDG00000021671	scaf4a	99	71.597	ENSOMEG00000014482	scaf4a	64	80.319	Oryzias_melastigma
ENSSLDG00000021671	scaf4a	60	66.349	ENSPKIG00000022408	scaf4a	99	65.757	Paramormyrops_kingsleyae
ENSSLDG00000021671	scaf4a	51	42.512	ENSPSIG00000014242	SCAF4	82	54.309	Pelodiscus_sinensis
ENSSLDG00000021671	scaf4a	62	50.136	ENSPMGG00000016741	scaf4a	78	53.762	Periophthalmus_magnuspinnatus
ENSSLDG00000021671	scaf4a	85	72.004	ENSPFOG00000017156	scaf4a	97	73.856	Poecilia_formosa
ENSSLDG00000021671	scaf4a	58	58.182	ENSPLAG00000004403	-	51	69.718	Poecilia_latipinna
ENSSLDG00000021671	scaf4a	67	80.570	ENSPLAG00000001972	scaf4a	92	81.589	Poecilia_latipinna
ENSSLDG00000021671	scaf4a	50	74.638	ENSPNAG00000015199	-	54	74.627	Pygocentrus_nattereri
ENSSLDG00000021671	scaf4a	70	57.679	ENSPNAG00000016892	scaf4a	83	60.865	Pygocentrus_nattereri
ENSSLDG00000021671	scaf4a	88	46.753	ENSSFOG00015006338	scaf4a	79	53.083	Scleropages_formosus
ENSSLDG00000021671	scaf4a	99	79.865	ENSSMAG00000017901	scaf4a	72	83.065	Scophthalmus_maximus
ENSSLDG00000021671	scaf4a	100	99.129	ENSSDUG00000012918	scaf4a	100	99.129	Seriola_dumerili
ENSSLDG00000021671	scaf4a	86	54.534	ENSXETG00000007351	scaf4	87	49.357	Xenopus_tropicalis