EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000021812 (Gene tree)
Gene ID: -
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 11533 bases
Position: chrPEQF01099095.1:672722-684254
Accession: 111665177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000028163	MA3	PF02847.17	7.4e-22	1	1
ENSSLDP00000028163	MIF4G	PF02854.19	5.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000029005	-	7196	XM_023420086	ENSSLDP00000028163	841 (aa)	XP_023275854	UPI000C6F6083

Gene Model

Click here to download ENSSLDG00000021812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021812's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021812	nom1	64	67.279	ENSG00000146909	NOM1	80	60.649	Homo_sapiens
ENSSLDG00000021812	nom1	64	90.909	ENSAPOG00000012073	nom1	98	80.071	Acanthochromis_polyacanthus
ENSSLDG00000021812	nom1	81	57.787	ENSAMEG00000001412	NOM1	96	58.213	Ailuropoda_melanoleuca
ENSSLDG00000021812	nom1	89	89.695	ENSACIG00000018050	nom1	97	89.695	Amphilophus_citrinellus
ENSSLDG00000021812	nom1	98	79.359	ENSAOCG00000006229	nom1	98	79.380	Amphiprion_ocellaris
ENSSLDG00000021812	nom1	98	80.714	ENSAPEG00000015994	nom1	98	78.286	Amphiprion_percula
ENSSLDG00000021812	nom1	98	81.016	ENSATEG00000005405	nom1	98	80.169	Anabas_testudineus
ENSSLDG00000021812	nom1	78	58.235	ENSAPLG00000006585	NOM1	80	67.614	Anas_platyrhynchos
ENSSLDG00000021812	nom1	100	75.587	ENSACLG00000000033	nom1	98	76.295	Astatotilapia_calliptera
ENSSLDG00000021812	nom1	64	74.907	ENSAMXG00000041486	nom1	61	75.849	Astyanax_mexicanus
ENSSLDG00000021812	nom1	97	51.377	ENSBTAG00000016435	NOM1	63	65.556	Bos_taurus
ENSSLDG00000021812	nom1	98	54.785	ENSCJAG00000004336	NOM1	95	53.819	Callithrix_jacchus
ENSSLDG00000021812	nom1	97	51.598	ENSCAFG00020005121	NOM1	95	52.029	Canis_lupus_dingo
ENSSLDG00000021812	nom1	81	57.511	ENSCHIG00000020102	NOM1	64	65.556	Capra_hircus
ENSSLDG00000021812	nom1	98	54.436	ENSTSYG00000000227	NOM1	84	57.808	Carlito_syrichta
ENSSLDG00000021812	nom1	62	70.250	ENSCAPG00000016273	NOM1	99	70.250	Cavia_aperea
ENSSLDG00000021812	nom1	98	51.957	ENSCPOG00000025538	NOM1	61	64.717	Cavia_porcellus
ENSSLDG00000021812	nom1	89	69.762	ENSCCAG00000014944	NOM1	99	68.750	Cebus_capucinus
ENSSLDG00000021812	nom1	81	59.884	ENSCLAG00000000267	NOM1	63	67.730	Chinchilla_lanigera
ENSSLDG00000021812	nom1	70	67.598	ENSCPBG00000018215	NOM1	72	67.790	Chrysemys_picta_bellii
ENSSLDG00000021812	nom1	82	37.324	ENSCING00000005248	-	67	41.633	Ciona_intestinalis
ENSSLDG00000021812	nom1	64	67.098	ENSCANG00000041984	NOM1	92	67.532	Colobus_angolensis_palliatus
ENSSLDG00000021812	nom1	97	52.688	ENSCGRG00001020293	Nom1	96	53.653	Cricetulus_griseus_chok1gshd
ENSSLDG00000021812	nom1	61	68.979	ENSCGRG00000005405	Nom1	97	68.979	Cricetulus_griseus_crigri
ENSSLDG00000021812	nom1	94	72.579	ENSCSEG00000000932	nom1	61	84.708	Cynoglossus_semilaevis
ENSSLDG00000021812	nom1	100	72.706	ENSCVAG00000007562	nom1	100	71.529	Cyprinodon_variegatus
ENSSLDG00000021812	nom1	63	75.947	ENSDARG00000060027	nom1	100	75.975	Danio_rerio
ENSSLDG00000021812	nom1	63	58.022	ENSDORG00000015682	Nom1	99	50.638	Dipodomys_ordii
ENSSLDG00000021812	nom1	59	38.372	FBgn0035336	CG9004	77	36.215	Drosophila_melanogaster
ENSSLDG00000021812	nom1	73	58.531	ENSETEG00000003104	NOM1	88	58.531	Echinops_telfairi
ENSSLDG00000021812	nom1	51	50.917	ENSEBUG00000010077	nom1	96	50.917	Eptatretus_burgeri
ENSSLDG00000021812	nom1	81	60.317	ENSEASG00005001489	NOM1	95	53.475	Equus_asinus_asinus
ENSSLDG00000021812	nom1	68	64.533	ENSECAG00000007596	NOM1	89	54.079	Equus_caballus
ENSSLDG00000021812	nom1	65	80.292	ENSELUG00000006266	nom1	63	82.264	Esox_lucius
ENSSLDG00000021812	nom1	81	58.297	ENSFCAG00000006467	NOM1	84	58.571	Felis_catus
ENSSLDG00000021812	nom1	81	57.940	ENSFALG00000006904	NOM1	77	67.472	Ficedula_albicollis
ENSSLDG00000021812	nom1	98	51.830	ENSFDAG00000016241	NOM1	65	65.543	Fukomys_damarensis
ENSSLDG00000021812	nom1	98	73.133	ENSFHEG00000015974	nom1	64	85.009	Fundulus_heteroclitus
ENSSLDG00000021812	nom1	94	62.716	ENSGMOG00000005129	nom1	100	62.594	Gadus_morhua
ENSSLDG00000021812	nom1	89	54.746	ENSGALG00000006437	NOM1	62	65.799	Gallus_gallus
ENSSLDG00000021812	nom1	100	73.373	ENSGAFG00000003211	nom1	100	73.498	Gambusia_affinis
ENSSLDG00000021812	nom1	82	58.060	ENSGAGG00000014347	NOM1	64	67.992	Gopherus_agassizii
ENSSLDG00000021812	nom1	65	66.364	ENSGGOG00000010920	NOM1	88	53.819	Gorilla_gorilla
ENSSLDG00000021812	nom1	100	75.503	ENSHBUG00000014616	nom1	98	75.714	Haplochromis_burtoni
ENSSLDG00000021812	nom1	98	54.524	ENSHGLG00000007392	NOM1	84	58.276	Heterocephalus_glaber_female
ENSSLDG00000021812	nom1	88	69.745	ENSHGLG00100014407	NOM1	82	69.745	Heterocephalus_glaber_male
ENSSLDG00000021812	nom1	63	72.212	ENSIPUG00000013980	nom1	98	60.287	Ictalurus_punctatus
ENSSLDG00000021812	nom1	65	67.395	ENSSTOG00000031736	NOM1	93	68.856	Ictidomys_tridecemlineatus
ENSSLDG00000021812	nom1	58	71.047	ENSJJAG00000011716	Nom1	98	71.047	Jaculus_jaculus
ENSSLDG00000021812	nom1	100	76.613	ENSLBEG00000009252	nom1	100	76.985	Labrus_bergylta
ENSSLDG00000021812	nom1	83	63.053	ENSLACG00000011777	NOM1	64	70.544	Latimeria_chalumnae
ENSSLDG00000021812	nom1	98	63.691	ENSLOCG00000012452	nom1	66	75.985	Lepisosteus_oculatus
ENSSLDG00000021812	nom1	97	49.240	ENSLAFG00000007119	NOM1	65	61.381	Loxodonta_africana
ENSSLDG00000021812	nom1	97	51.765	ENSMMUG00000039033	NOM1	79	57.244	Macaca_mulatta
ENSSLDG00000021812	nom1	63	68.431	ENSMLEG00000037062	NOM1	99	68.691	Mandrillus_leucophaeus
ENSSLDG00000021812	nom1	98	79.142	ENSMAMG00000004118	nom1	98	77.123	Mastacembelus_armatus
ENSSLDG00000021812	nom1	100	75.469	ENSMZEG00005000384	nom1	98	75.386	Maylandia_zebra
ENSSLDG00000021812	nom1	82	58.262	ENSMGAG00000005051	NOM1	77	66.667	Meleagris_gallopavo
ENSSLDG00000021812	nom1	97	54.392	ENSMAUG00000017988	Nom1	95	53.800	Mesocricetus_auratus
ENSSLDG00000021812	nom1	63	66.415	ENSMICG00000017531	NOM1	96	53.019	Microcebus_murinus
ENSSLDG00000021812	nom1	98	53.708	ENSMOCG00000015962	Nom1	95	53.469	Microtus_ochrogaster
ENSSLDG00000021812	nom1	99	72.398	ENSMMOG00000004419	nom1	65	80.109	Mola_mola
ENSSLDG00000021812	nom1	63	70.301	ENSMODG00000005177	NOM1	63	70.301	Monodelphis_domestica
ENSSLDG00000021812	nom1	93	79.284	ENSMALG00000008800	nom1	61	88.041	Monopterus_albus
ENSSLDG00000021812	nom1	97	53.212	MGP_CAROLIEiJ_G0027043	Nom1	94	53.744	Mus_caroli
ENSSLDG00000021812	nom1	97	53.110	ENSMUSG00000001569	Nom1	94	53.486	Mus_musculus
ENSSLDG00000021812	nom1	97	52.189	MGP_SPRETEiJ_G0028039	Nom1	94	52.850	Mus_spretus
ENSSLDG00000021812	nom1	81	56.268	ENSMPUG00000009745	NOM1	76	64.015	Mustela_putorius_furo
ENSSLDG00000021812	nom1	70	63.697	ENSMLUG00000009129	NOM1	88	68.045	Myotis_lucifugus
ENSSLDG00000021812	nom1	100	76.033	ENSNBRG00000016429	nom1	95	87.335	Neolamprologus_brichardi
ENSSLDG00000021812	nom1	97	53.293	ENSNLEG00000000238	NOM1	80	59.175	Nomascus_leucogenys
ENSSLDG00000021812	nom1	69	56.706	ENSMEUG00000001108	NOM1	52	74.319	Notamacropus_eugenii
ENSSLDG00000021812	nom1	52	59.197	ENSOPRG00000014676	NOM1	69	51.515	Ochotona_princeps
ENSSLDG00000021812	nom1	81	58.696	ENSODEG00000009399	NOM1	76	65.854	Octodon_degus
ENSSLDG00000021812	nom1	94	77.403	ENSONIG00000005958	nom1	100	76.427	Oreochromis_niloticus
ENSSLDG00000021812	nom1	55	69.197	ENSOANG00000006139	-	97	69.197	Ornithorhynchus_anatinus
ENSSLDG00000021812	nom1	93	46.357	ENSOCUG00000021448	-	90	54.766	Oryctolagus_cuniculus
ENSSLDG00000021812	nom1	97	55.462	ENSOCUG00000004071	-	95	55.024	Oryctolagus_cuniculus
ENSSLDG00000021812	nom1	100	73.081	ENSORLG00000010541	nom1	64	84.240	Oryzias_latipes
ENSSLDG00000021812	nom1	93	72.392	ENSORLG00020010789	nom1	69	84.240	Oryzias_latipes_hni
ENSSLDG00000021812	nom1	100	72.877	ENSORLG00015010475	nom1	69	84.053	Oryzias_latipes_hsok
ENSSLDG00000021812	nom1	100	73.208	ENSOMEG00000004219	nom1	98	73.381	Oryzias_melastigma
ENSSLDG00000021812	nom1	69	64.605	ENSOGAG00000001124	NOM1	87	68.985	Otolemur_garnettii
ENSSLDG00000021812	nom1	81	57.368	ENSOARG00000007261	NOM1	73	65.556	Ovis_aries
ENSSLDG00000021812	nom1	81	60.990	ENSPPAG00000041374	NOM1	80	60.508	Pan_paniscus
ENSSLDG00000021812	nom1	81	57.872	ENSPTIG00000013532	NOM1	73	65.926	Panthera_tigris_altaica
ENSSLDG00000021812	nom1	81	60.990	ENSPTRG00000019917	NOM1	80	60.508	Pan_troglodytes
ENSSLDG00000021812	nom1	97	54.374	ENSPANG00000007605	NOM1	80	60.200	Papio_anubis
ENSSLDG00000021812	nom1	100	61.566	ENSPKIG00000005825	nom1	65	71.508	Paramormyrops_kingsleyae
ENSSLDG00000021812	nom1	66	65.957	ENSPSIG00000017848	NOM1	90	67.339	Pelodiscus_sinensis
ENSSLDG00000021812	nom1	98	73.735	ENSPMGG00000002577	nom1	98	72.242	Periophthalmus_magnuspinnatus
ENSSLDG00000021812	nom1	97	55.317	ENSPEMG00000024180	Nom1	95	54.426	Peromyscus_maniculatus_bairdii
ENSSLDG00000021812	nom1	63	68.914	ENSPCIG00000027941	NOM1	59	69.173	Phascolarctos_cinereus
ENSSLDG00000021812	nom1	100	75.030	ENSPFOG00000015771	nom1	99	74.850	Poecilia_formosa
ENSSLDG00000021812	nom1	64	85.607	ENSPLAG00000007856	nom1	99	71.938	Poecilia_latipinna
ENSSLDG00000021812	nom1	100	75.030	ENSPMEG00000014155	nom1	99	74.850	Poecilia_mexicana
ENSSLDG00000021812	nom1	100	74.083	ENSPREG00000008850	nom1	100	73.498	Poecilia_reticulata
ENSSLDG00000021812	nom1	98	51.953	ENSPPYG00000018222	NOM1	79	56.671	Pongo_abelii
ENSSLDG00000021812	nom1	80	63.256	ENSPCAG00000000440	NOM1	68	63.256	Procavia_capensis
ENSSLDG00000021812	nom1	63	66.352	ENSPCOG00000015222	NOM1	99	66.603	Propithecus_coquereli
ENSSLDG00000021812	nom1	97	52.313	ENSPVAG00000014760	NOM1	95	52.273	Pteropus_vampyrus
ENSSLDG00000021812	nom1	100	75.235	ENSPNYG00000006975	nom1	97	85.475	Pundamilia_nyererei
ENSSLDG00000021812	nom1	65	73.406	ENSPNAG00000011085	nom1	98	59.070	Pygocentrus_nattereri
ENSSLDG00000021812	nom1	97	51.202	ENSRNOG00000048969	AABR07059041.1	64	64.740	Rattus_norvegicus
ENSSLDG00000021812	nom1	98	54.513	ENSRBIG00000037042	NOM1	95	54.448	Rhinopithecus_bieti
ENSSLDG00000021812	nom1	98	54.276	ENSRROG00000037293	NOM1	95	54.211	Rhinopithecus_roxellana
ENSSLDG00000021812	nom1	63	69.288	ENSSHAG00000017998	-	77	70.152	Sarcophilus_harrisii
ENSSLDG00000021812	nom1	58	74.280	ENSSFOG00015003196	nom1	100	74.280	Scleropages_formosus
ENSSLDG00000021812	nom1	100	82.130	ENSSMAG00000011047	nom1	98	82.048	Scophthalmus_maximus
ENSSLDG00000021812	nom1	100	97.988	ENSSDUG00000006834	nom1	100	97.988	Seriola_dumerili
ENSSLDG00000021812	nom1	82	48.913	ENSSPUG00000002556	NOM1	90	68.571	Sphenodon_punctatus
ENSSLDG00000021812	nom1	65	90.792	ENSSPAG00000000953	nom1	100	78.760	Stegastes_partitus
ENSSLDG00000021812	nom1	81	57.286	ENSTGUG00000000702	-	75	67.614	Taeniopygia_guttata
ENSSLDG00000021812	nom1	67	81.350	ENSTRUG00000010239	nom1	98	72.837	Takifugu_rubripes
ENSSLDG00000021812	nom1	98	70.496	ENSTNIG00000012783	nom1	68	82.364	Tetraodon_nigroviridis
ENSSLDG00000021812	nom1	95	52.675	ENSTTRG00000009691	NOM1	87	55.355	Tursiops_truncatus
ENSSLDG00000021812	nom1	81	58.746	ENSUAMG00000025450	NOM1	95	52.625	Ursus_americanus
ENSSLDG00000021812	nom1	81	58.686	ENSUMAG00000014275	NOM1	96	57.554	Ursus_maritimus
ENSSLDG00000021812	nom1	74	68.664	ENSVVUG00000002608	NOM1	95	68.664	Vulpes_vulpes
ENSSLDG00000021812	nom1	83	56.414	ENSXETG00000021611	nom1	82	75.122	Xenopus_tropicalis
ENSSLDG00000021812	nom1	98	74.279	ENSXMAG00000002451	nom1	98	73.293	Xiphophorus_maculatus